FFCP PHASE1:Hg19::chr16:3096638..3096649,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64386 | |EntrezGene=64386 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14246 | |HGNC=14246 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPA2 | |UniProt=Q9NPA2 | ||
|association_with_transcript=-32bp_to_ENST00000336577,NM_022468,uc002cth.2_5end | |association_with_transcript=-32bp_to_ENST00000336577,NM_022468,uc002cth.2_5end | ||
|cluster_id=chr16:3096638..3096649,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_MMP25_5end | |description=CAGE_peak_3_at_MMP25_5end | ||
|id=chr16:3096638..3096649,+ | |id=chr16:3096638..3096649,+ | ||
|ontology_enrichment_celltype=CL:0000766!6.14e-24!76;CL:0000763!6.27e-20!112;CL:0000049!6.27e-20!112;CL:0002057!1.89e-18!42;CL:0000839!1.55e-17!70;CL:0000860!1.19e-16!45;CL:0002194!2.37e-15!63;CL:0000576!2.37e-15!63;CL:0000040!2.37e-15!63;CL:0000559!2.37e-15!63;CL:0000557!8.98e-15!71;CL:0000738!1.13e-14!140;CL:0002009!1.38e-14!65;CL:0000094!2.42e-13!8;CL:0000037!1.89e-12!172;CL:0000566!1.89e-12!172;CL:0002032!4.44e-12!165;CL:0000837!4.44e-12!165;CL:0000988!6.36e-11!182;CL:0000081!3.96e-09!11;CL:0002031!1.85e-08!124;CL:0002087!5.45e-08!119 | |ontology_enrichment_celltype=CL:0000766!6.14e-24!76;CL:0000763!6.27e-20!112;CL:0000049!6.27e-20!112;CL:0002057!1.89e-18!42;CL:0000839!1.55e-17!70;CL:0000860!1.19e-16!45;CL:0002194!2.37e-15!63;CL:0000576!2.37e-15!63;CL:0000040!2.37e-15!63;CL:0000559!2.37e-15!63;CL:0000557!8.98e-15!71;CL:0000738!1.13e-14!140;CL:0002009!1.38e-14!65;CL:0000094!2.42e-13!8;CL:0000037!1.89e-12!172;CL:0000566!1.89e-12!172;CL:0002032!4.44e-12!165;CL:0000837!4.44e-12!165;CL:0000988!6.36e-11!182;CL:0000081!3.96e-09!11;CL:0002031!1.85e-08!124;CL:0002087!5.45e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000094;6.95e-23;8!CL:0000081;1.80e-16;11!CL:0000775;1.99e-16;3!CL:0000771;2.01e-11;2!CL:0000453;2.66e-09;5!CL:0000226;4.07e-07;3!CL:0000842;4.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,6.83e-23,8;CL:0000081,1.78e-16,11;CL:0000775,1.99e-16,3;CL:0000771,2.01e-11,2;CL:0000453,2.74e-09,5;CL:0000763,9.17e-08,108;CL:0000049,9.17e-08,108;CL:0000766,4.22e-07,72;CL:0000226,4.54e-07,3;CL:0000842,4.54e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.59e-22!102;UBERON:0003061!1.59e-22!102;UBERON:0002193!1.95e-21!112;UBERON:0000178!2.38e-12!15;UBERON:0000179!2.38e-12!15;UBERON:0000463!2.38e-12!15;UBERON:0002371!5.29e-12!80;UBERON:0002405!6.55e-11!115;UBERON:0001474!1.67e-10!86;UBERON:0007023!1.68e-08!115;UBERON:0004765!3.36e-08!101;UBERON:0001434!3.36e-08!101 | |ontology_enrichment_uberon=UBERON:0002390!1.59e-22!102;UBERON:0003061!1.59e-22!102;UBERON:0002193!1.95e-21!112;UBERON:0000178!2.38e-12!15;UBERON:0000179!2.38e-12!15;UBERON:0000463!2.38e-12!15;UBERON:0002371!5.29e-12!80;UBERON:0002405!6.55e-11!115;UBERON:0001474!1.67e-10!86;UBERON:0007023!1.68e-08!115;UBERON:0004765!3.36e-08!101;UBERON:0001434!3.36e-08!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.42e-38;15!UBERON:0000179;5.42e-38;15!UBERON:0000463;5.42e-38;15!UBERON:0002390;6.85e-22;32!UBERON:0002193;7.14e-14;42!UBERON:0002106;4.07e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.04e-38,15;UBERON:0000179,6.04e-38,15;UBERON:0000463,6.04e-38,15;UBERON:0002390,4.45e-13,98;UBERON:0003061,4.45e-13,98;UBERON:0002193,5.94e-13,108;UBERON:0002106,3.65e-07,3;UBERON:0004854,3.65e-07,3;UBERON:0009034,3.65e-07,3;UBERON:0002095,3.65e-07,3;UBERON:0004782,3.65e-07,3;UBERON:0003281,3.65e-07,3;UBERON:0009664,3.65e-07,3;UBERON:0002296,3.65e-07,3;UBERON:0005602,3.65e-07,3;UBERON:0001179,3.65e-07,3;UBERON:0006293,3.65e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,12.5876568591649,0.383829398097213,0.928896739896456,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0.872389432677388,0.755751887377619,1.4555043671269,0.697287110717054,0.411167888021826,0.619412741790207,0,0.256160706529101,1.18241114944293,0.689491361473237,0.645484683583826,0,0.564727018627814,0,0.449446968890169,0.612167784741805,0,1.27867425159808,0.989553900560148,0.997318288108159,1.27867425159808,0.580418477257168,0,0,0.502497330513487,1.0429658368404,1.3031330682307,0.605399502633369,0.368277635987565,0.632924774881769,0,0,0,0,0,0.48217676009124,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0.334372990781356,0,0,0,5.01347055983281,0,0,0,2.17755243533648,6.89314542067355,12.3328428452757,11.6067007470056,4.63684937176084,0,0,0,8.95143807310773,0,0,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.947109008176067,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0.649094787309367,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.4875377539009,50.4114343392823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0.116193942869518,0,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.829312462163088,0,0.6312121671319,0,0,0,0,0,0,0,0.336393253036082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,134.821264310493,131.631042049771,157.477895105693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80428461064202,1.06727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.784306353074702,0,0,0,0.309123034943167,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,21.3127995877511,9.94028369285088,33.6091840432756,18.8203102611653,21.3908382004821,16.8603060910106,24.3014146757152,19.8281294073568,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,1.36771666781428,0,0,0,0,0,0,0.293016358543788,0.36408156524854,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,11.974154617347,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,0,0.482259445395058,0.962776056180637,1.24632101408756,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,1.32506888912221,0,0,0,0,1.70859860108311,0.314408610199332,2.07119527673598,4.96166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,8.18413297125432,5.71318813347461,4.08913485639611,0,0.245772908753719,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0.430227358820278,0.118332000730565,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0,0,0.8453114551668,0,2.06764619555678,1.54698931136585,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.258355639344024,0.248298857183432,0,0.12729431655633,0.202117188958219,0.217716747896961,0,0.5388164241167,0.358611026963382,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,12.5876568591649,0.383829398097213,0.928896739896456,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0.872389432677388,0.755751887377619,1.4555043671269,0.697287110717054,0.411167888021826,0.619412741790207,0,0.256160706529101,1.18241114944293,0.689491361473237,0.645484683583826,0,0.564727018627814,0,0.449446968890169,0.612167784741805,0,1.27867425159808,0.989553900560148,0.997318288108159,1.27867425159808,0.580418477257168,0,0,0.502497330513487,1.0429658368404,1.3031330682307,0.605399502633369,0.368277635987565,0.632924774881769,0,0,0,0,0,0.48217676009124,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0.334372990781356,0,0,0,5.01347055983281,0,0,0,2.17755243533648,6.89314542067355,12.3328428452757,11.6067007470056,4.63684937176084,0,0,0,8.95143807310773,0,0,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.947109008176067,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0.649094787309367,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.4875377539009,50.4114343392823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0.116193942869518,0,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.829312462163088,0,0.6312121671319,0,0,0,0,0,0,0,0.336393253036082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,134.821264310493,131.631042049771,157.477895105693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80428461064202,1.06727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.784306353074702,0,0,0,0.309123034943167,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,21.3127995877511,9.94028369285088,33.6091840432756,18.8203102611653,21.3908382004821,16.8603060910106,24.3014146757152,19.8281294073568,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,1.36771666781428,0,0,0,0,0,0,0.293016358543788,0.36408156524854,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,11.974154617347,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,0,0.482259445395058,0.962776056180637,1.24632101408756,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,1.32506888912221,0,0,0,0,1.70859860108311,0.314408610199332,2.07119527673598,4.96166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,8.18413297125432,5.71318813347461,4.08913485639611,0,0.245772908753719,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0.430227358820278,0.118332000730565,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0,0,0.8453114551668,0,2.06764619555678,1.54698931136585,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.258355639344024,0.248298857183432,0,0.12729431655633,0.202117188958219,0.217716747896961,0,0.5388164241167,0.358611026963382,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p3@MMP25 | |short_description=p3@MMP25 | ||
}} | }} |
Latest revision as of 10:12, 16 September 2015
Short description: | p3@MMP25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MMP25_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -32bp_to_ENST00000336577, NM_022468, uc002cth.2_5end |
EntrezGene: | MMP25 |
HGNC: | 14246 |
UniProt: | Q9NPA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 6.83e-23 | 8 |
blood cell | 1.78e-16 | 11 |
neutrophil | 1.99e-16 | 3 |
eosinophil | 2.01e-11 | 2 |
Langerhans cell | 2.74e-09 | 5 |
myeloid cell | 9.17e-08 | 108 |
common myeloid progenitor | 9.17e-08 | 108 |
myeloid leukocyte | 4.22e-07 | 72 |
single nucleate cell | 4.54e-07 | 3 |
mononuclear cell | 4.54e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 6.04e-38 | 15 |
haemolymphatic fluid | 6.04e-38 | 15 |
organism substance | 6.04e-38 | 15 |
hematopoietic system | 4.45e-13 | 98 |
blood island | 4.45e-13 | 98 |
hemolymphoid system | 5.94e-13 | 108 |
spleen | 3.65e-07 | 3 |
gastrointestinal system mesentery | 3.65e-07 | 3 |
stomach region | 3.65e-07 | 3 |
mesentery | 3.65e-07 | 3 |
gastrointestinal system serosa | 3.65e-07 | 3 |
mesentery of stomach | 3.65e-07 | 3 |
gut mesentery | 3.65e-07 | 3 |
dorsal mesentery | 3.65e-07 | 3 |
dorsal mesogastrium | 3.65e-07 | 3 |
peritoneal cavity | 3.65e-07 | 3 |
spleen primordium | 3.65e-07 | 3 |