FFCP PHASE1:Hg19::chr17:48273661..48273705,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr17:48273661..48273705,+ to FFCP PHASE1:Hg19::chr17:48273661..48273705,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:48273661..48273705,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48273661..48273705,+ | |||
|id=chr17:48273661..48273705,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.15e-34!180;CL:0000057!9.80e-22!75;CL:0000183!3.56e-14!59;CL:0000680!6.55e-14!57;CL:0000056!6.55e-14!57;CL:0000355!6.55e-14!57;CL:0000048!5.54e-13!430;CL:0000187!6.50e-13!54;CL:0000723!3.91e-12!436;CL:0000034!5.97e-12!444;CL:0000393!2.61e-10!60;CL:0000211!2.61e-10!60;CL:0002371!4.88e-10!591;CL:0000192!6.51e-10!42;CL:0000514!6.51e-10!42;CL:0000144!6.76e-10!625;CL:0002620!9.83e-10!23;CL:0000359!2.15e-07!32;CL:0002320!4.40e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.89e-10;55!CL:0000048;2.99e-09;58!CL:0000723;1.79e-08;61!CL:0000499;6.00e-08;28!CL:0002570;7.35e-08;8!CL:0002320;4.48e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.71e-17,76;CL:0000048,6.61e-13,427;CL:0000723,2.58e-12,433;CL:0000034,1.48e-11,441;CL:0002320,5.69e-10,361;CL:0000134,2.13e-08,354;CL:0000499,5.30e-08,28;CL:0002570,7.58e-08,8;CL:0000219,2.77e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.52e-17!83;UBERON:0002329!2.52e-17!83;UBERON:0003077!2.52e-17!83;UBERON:0003059!2.52e-17!83;UBERON:0007282!2.52e-17!83;UBERON:0009618!2.52e-17!83;UBERON:0007285!2.52e-17!83;UBERON:0004290!2.57e-15!70;UBERON:0001134!2.86e-14!61;UBERON:0002036!2.86e-14!61;UBERON:0003082!2.86e-14!61;UBERON:0002385!4.38e-14!63;UBERON:0001015!4.38e-14!63;UBERON:0000383!4.38e-14!63;UBERON:0000486!2.17e-12!82;UBERON:0005256!4.77e-12!143;UBERON:0002100!1.52e-07!216;UBERON:0002199!2.43e-07!45;UBERON:0002416!2.43e-07!45;UBERON:0002384!2.54e-07!375;UBERON:0000475!9.56e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.40e-08;14!UBERON:0002384;1.30e-07;198!UBERON:0003104;2.62e-07;7!UBERON:0009142;2.62e-07;7!UBERON:0004457;3.50e-07;9!UBERON:0000042;3.50e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.81e-10,371;UBERON:0001013,1.42e-08,14;UBERON:0001134,7.45e-07,62;UBERON:0002036,7.45e-07,62;UBERON:0003082,7.45e-07,62 | |||
|phase1_expression=0.54503513781167,3.21150785836475,1.9733616573436,8.00586386825043,14.3027550216732,6.10636966870258,15.1979926900986,0.631719873426831,0,0,0,0,3.4289707169699,0.37129905888014,2.65117900582333,0.672325146451775,0.602694528023977,1.46062018077475,0.975865597581014,0.369363174230364,1.22400414746552,4.07491137921514,0.572471974262113,0.410623275218653,1.12988375635323,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,2.30152611318355,6.50590474292219,0,5.06962816362883,0,5.35298357332899,0.189069634328136,1.33037638477538,1.31752178539689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.8909902610315,1.13967460498122,0.794455084879313,16.92336062418,3.54668382198357,2.80338800071154,1.06748995729705,12.5800449692752,0,1.21239604862719,0.490385709340376,0.908144565869588,4.60940739583999,0,0.312160076830321,0,0.448346041655403,0.23486899728753,0.161872944368132,0.280901613404497,0.816616685019573,0.491337269247072,0.206651562351531,0,12.3633464639278,0,4.31170885089743,0.168336113954066,0.375355559615893,0,1.31693286264251,10.1140972613676,7.36166488642324,1.02088964844019,7.5343646989322,5.33893472046419,2.7551147150743,14.7044637081357,0.721367704669072,13.912589162464,1.67505170698431,2.19409231913646,0.974370051611986,7.57301322732343,0.828449087780694,1.45481451136931,9.9402685904652,0.302256294682921,1.69560592310488,0,0,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,1.56449532329816,1.28648187638577,0,0.464367928031979,1.44375896333917,0.236613600079688,0,0,0,0,0,0,0,0,0,2.80483547606892,2.057870056657,14.7008711385542,0,0,0,0,0,0.514703430895577,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.469634776943287,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0.336393253036082,1.74384027533312,0.8800594298514,0.775630294546667,0,5.917119267892,1.06375246633948,9.36066932202295,0.514414748524284,1.41849132023278,1.3321108950805,3.28849385413739,7.5967024754802,4.93944202068461,1.30294473717494,4.26470338491055,1.58390374586686,0,0,0.499864955910285,0,0,0,4.0736225433569,16.0806710167759,0,1.15825045334063,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,2.00068208423871,1.62759014219841,15.5978146148105,13.20374517099,12.143085957613,3.27995961979597,0.300946099727719,2.27407504055985,2.0694614258501,2.65690239414175,1.29058417979192,0.521301686808497,1.95801157462741,5.49029478097369,0,0,0,0.303127571446259,4.99306318531491,4.83824469327489,0.744323423456331,2.76231551918512,13.4716845327875,2.17836553734692,0,9.16867350518563,5.93672265779964,1.54209693802656,6.03709866064632,0.246381468041427,0,5.11325665223821,0,0,0,1.26295892981067,1.82091168006717,3.2781103739856,0,0,0,0,0,1.13733384070897,0,0.431831832204279,1.54227252690289,0.541892875087706,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0.457847324091717,0.082509499920588,0,0,0,0.096670718292122,0.308097234229289,2.30255512089194,1.10269257987624,0.429680979473094,2.46528379654188,0.426133137080504,4.36256974669013,0.165284915360978,0,0,0.10115778085555,1.85938219718914,22.0368642781448,0,0.308033580176089,0.532306030317022,0,0,0,0.744316738719335,0.632758849437452,4.76575484809562,0.255897791311334,0.855877976067841,0.95460974377781,3.92474320099615,2.15846949099978,3.0199073270966,2.94531005864216,0,0,4.21258456238981,0,1.21856744815642,0,1.63799893689583,5.23200098228737,2.26016233240486,0.551365343546124,1.32687795048244,0.438450885253763,1.15755106853338,0,0,0.30982349809975,2.81695602532241,0.717056761020258,2.75097314836739,0.7133421029625,0.354761064070598,3.58882980006029,7.24448764511784,0,2.79947776195986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.461701551022782,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,4.81546588379273,0,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,4.74559555639118,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,1.71906176567983,0,0.279282401272254,0,0,0.199679000498991,0,0,0.403100834920358,6.84569778730567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0.25426853765475,0.542999601753713,0.864221491201268,0,0,0,1.87426823963964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0298796779456,4.67426619694449,3.88364103051829,0.568209015825267,1.76097531226803,1.77962244319307,0.457680136793847,2.87338755150154,3.26418121223839,0.443565449968902,0.955780602982214,0,1.24210365501008,1.24411862352257,2.39257543102195,2.08698024724694,9.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| ||
|short_description=p@chr17:48273661..48273705,+ | |||
}} | }} |
Latest revision as of 18:37, 25 July 2015
Short description: | p@chr17:48273661..48273705, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48273661..48273705, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.71e-17 | 76 |
multi fate stem cell | 6.61e-13 | 427 |
somatic stem cell | 2.58e-12 | 433 |
stem cell | 1.48e-11 | 441 |
connective tissue cell | 5.69e-10 | 361 |
mesenchymal cell | 2.13e-08 | 354 |
stromal cell | 5.30e-08 | 28 |
mesenchymal stem cell of adipose | 7.58e-08 | 8 |
motile cell | 2.77e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.81e-10 | 371 |
adipose tissue | 1.42e-08 | 14 |
skeletal muscle tissue | 7.45e-07 | 62 |
striated muscle tissue | 7.45e-07 | 62 |
myotome | 7.45e-07 | 62 |