FFCP PHASE1:Hg19::chr18:46895066..46895078,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:46895066..46895078,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_at_chr18:46895066..46895078,- | |description=CAGE_peak_at_chr18:46895066..46895078,- | ||
|id=chr18:46895066..46895078,- | |id=chr18:46895066..46895078,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;8.84e-13;1!UBERON:0006298;9.91e-13;1!UBERON:0007297;9.01e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;2.75e-12;1!DOID:1357;2.75e-12;1!DOID:5409;3.26e-12;4!DOID:1325;2.37e-07;7!DOID:3904;2.37e-07;7!DOID:0050615;8.00e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.27e-12,4;DOID:0050619,3.45e-12,1;DOID:1357,3.45e-12,1;DOID:1325,2.37e-07,7;DOID:3904,2.37e-07,7;DOID:0050615,8.33e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.20e-17!115;UBERON:0002530!1.03e-11!59;UBERON:0001007!4.18e-11!155;UBERON:0001555!4.18e-11!155;UBERON:0007026!4.18e-11!155;UBERON:0004921!9.10e-11!129;UBERON:0004185!9.10e-11!129;UBERON:0001041!2.24e-10!98;UBERON:0001829!7.85e-10!2;UBERON:0004119!1.07e-09!169;UBERON:0000925!1.07e-09!169;UBERON:0006595!1.07e-09!169;UBERON:0000077!1.27e-09!130;UBERON:0003127!1.74e-09!2;UBERON:0000341!2.06e-09!2;UBERON:0000466!3.71e-08!126;UBERON:0000481!5.56e-08!347;UBERON:0002368!1.76e-07!35;UBERON:0001044!3.75e-07!6;UBERON:0003293!3.75e-07!6;UBERON:0003294!3.75e-07!6;UBERON:0010047!3.75e-07!6;UBERON:0000167!3.75e-07!6;UBERON:0001004!6.62e-07!72;UBERON:0000949!6.68e-07!45;UBERON:0005177!6.68e-07!107;UBERON:0003408!7.17e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.01e-23;2!UBERON:0003127;8.54e-23;2!UBERON:0001044;9.69e-18;6!UBERON:0003293;9.69e-18;6!UBERON:0003294;9.69e-18;6!UBERON:0010047;9.69e-18;6!UBERON:0003408;9.69e-18;6!UBERON:0000167;9.69e-18;6!UBERON:0001831;8.84e-13;1!UBERON:0001567;8.84e-13;1!UBERON:0001736;9.91e-13;1!UBERON:0002372;2.75e-12;1!UBERON:0001301;2.75e-12;1!UBERON:0001764;2.75e-12;1!UBERON:0001961;2.75e-12;1!UBERON:0001825;2.75e-12;1!UBERON:0001744;2.75e-12;1!UBERON:0001042;2.75e-12;1!UBERON:0001735;2.75e-12;1!UBERON:0000161;9.27e-10;19!UBERON:0000166;9.27e-10;19!UBERON:0001041;6.51e-08;14!UBERON:0003126;3.56e-07;7!UBERON:0001005;3.56e-07;7!UBERON:0004089;5.11e-07;2!UBERON:0000341;5.73e-07;2!UBERON:0000007;9.01e-07;2!UBERON:0006562;9.01e-07;2!UBERON:0004921;9.84e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.01e-23,2;UBERON:0003127,8.55e-23,2;UBERON:0001044,9.70e-18,6;UBERON:0003293,9.70e-18,6;UBERON:0003294,9.70e-18,6;UBERON:0010047,9.70e-18,6;UBERON:0000167,9.70e-18,6;UBERON:0001831,8.85e-13,1;UBERON:0001567,8.85e-13,1;UBERON:0008801,8.85e-13,1;UBERON:0001736,9.92e-13,1;UBERON:0006298,9.92e-13,1;UBERON:0001301,1.57e-12,1;UBERON:0002372,1.75e-12,1;UBERON:0001961,1.75e-12,1;UBERON:0001744,1.75e-12,1;UBERON:0001735,1.75e-12,1;UBERON:0001764,3.45e-12,1;UBERON:0001825,3.45e-12,1;UBERON:0001004,4.30e-11,74;UBERON:0003408,7.08e-11,10;UBERON:0001041,2.83e-09,87;UBERON:0000166,1.74e-08,22;UBERON:0004921,4.97e-08,118;UBERON:0001007,1.14e-07,145;UBERON:0001555,1.14e-07,145;UBERON:0007026,1.14e-07,145;UBERON:0003126,3.56e-07,7;UBERON:0001005,3.56e-07,7;UBERON:0004089,5.11e-07,2;UBERON:0000341,5.73e-07,2;UBERON:0007023,7.82e-07,114;UBERON:0004119,8.28e-07,160;UBERON:0000925,8.28e-07,160;UBERON:0006595,8.28e-07,160;UBERON:0000007,8.52e-07,2 | |||
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| ||
|short_description=p@chr18:46895066..46895078,- | |short_description=p@chr18:46895066..46895078,- | ||
}} | }} |
Latest revision as of 01:10, 26 July 2015
Short description: | p@chr18:46895066..46895078, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:46895066..46895078, - |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.01e-23 | 2 |
open tracheal system trachea | 8.55e-23 | 2 |
saliva-secreting gland | 9.70e-18 | 6 |
gland of oral region | 9.70e-18 | 6 |
gland of foregut | 9.70e-18 | 6 |
oral gland | 9.70e-18 | 6 |
oral cavity | 9.70e-18 | 6 |
parotid gland | 8.85e-13 | 1 |
cheek | 8.85e-13 | 1 |
parotid gland primordium | 8.85e-13 | 1 |
submandibular gland | 9.92e-13 | 1 |
submandibular gland primordium | 9.92e-13 | 1 |
epididymis | 1.57e-12 | 1 |
tonsil | 1.75e-12 | 1 |
mucosa-associated lymphoid tissue | 1.75e-12 | 1 |
lymphoid tissue | 1.75e-12 | 1 |
tonsillar ring | 1.75e-12 | 1 |
maxillary sinus | 3.45e-12 | 1 |
paranasal sinus | 3.45e-12 | 1 |
respiratory system | 4.30e-11 | 74 |
gland of gut | 7.08e-11 | 10 |
foregut | 2.83e-09 | 87 |
oral opening | 1.74e-08 | 22 |
subdivision of digestive tract | 4.97e-08 | 118 |
digestive system | 1.14e-07 | 145 |
digestive tract | 1.14e-07 | 145 |
primitive gut | 1.14e-07 | 145 |
trachea | 3.56e-07 | 7 |
respiratory airway | 3.56e-07 | 7 |
midface | 5.11e-07 | 2 |
throat | 5.73e-07 | 2 |
adult organism | 7.82e-07 | 114 |
endoderm-derived structure | 8.28e-07 | 160 |
endoderm | 8.28e-07 | 160 |
presumptive endoderm | 8.28e-07 | 160 |
pituitary gland | 8.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.27e-12 | 4 |
paranasal sinus cancer | 3.45e-12 | 1 |
maxillary sinus cancer | 3.45e-12 | 1 |
bronchus cancer | 2.37e-07 | 7 |
bronchogenic carcinoma | 2.37e-07 | 7 |
respiratory system cancer | 8.33e-07 | 16 |