FFCP PHASE1:Hg19::chr19:13710923..13710935,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:13710923..13710935,- | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_at_chr19:13710923..13710935,- | |description=CAGE_peak_at_chr19:13710923..13710935,- | ||
|id=chr19:13710923..13710935,- | |id=chr19:13710923..13710935,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;5.48e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,5.48e-18,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;5.35e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,5.35e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000059!3.18e-13!11;UBERON:0001896!2.38e-12!3;UBERON:0005290!2.38e-12!3;UBERON:0010096!2.38e-12!3;UBERON:0000160!5.14e-11!27;UBERON:0007023!1.94e-10!115;UBERON:0003112!6.91e-10!1;UBERON:0000032!6.91e-10!1;UBERON:0005253!6.91e-10!1;UBERON:0003128!6.91e-10!1;UBERON:0002241!6.91e-10!1;UBERON:0001703!6.91e-10!1;UBERON:0004761!6.91e-10!1;UBERON:0009617!6.91e-10!1;UBERON:0003296!7.57e-10!4;UBERON:0010133!7.57e-10!4;UBERON:0002336!1.17e-09!1;UBERON:0001018!1.17e-09!1;UBERON:0002473!1.17e-09!1;UBERON:0005340!1.17e-09!1;UBERON:0002316!1.17e-09!1;UBERON:0003544!1.17e-09!1;UBERON:0001020!1.17e-09!1;UBERON:0005970!1.17e-09!1;UBERON:0002437!1.17e-09!1;UBERON:0001155!1.82e-09!9;UBERON:0001049!1.69e-08!57;UBERON:0005068!1.69e-08!57;UBERON:0006241!1.69e-08!57;UBERON:0007135!1.69e-08!57;UBERON:0005409!1.85e-08!35;UBERON:0002616!3.50e-08!59;UBERON:0002780!5.57e-07!41;UBERON:0001890!5.57e-07!41;UBERON:0006240!5.57e-07!41;UBERON:0003080!8.31e-07!42;UBERON:0000955!9.33e-07!69;UBERON:0006238!9.33e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;5.48e-18;2!UBERON:0004801;5.48e-18;2!UBERON:0000007;9.86e-18;2!UBERON:0000160;3.59e-17;17!UBERON:0005409;1.28e-13;22!UBERON:0000059;5.76e-13;11!UBERON:0002114;2.74e-12;2!UBERON:0001052;1.50e-09;4!UBERON:0003296;1.50e-09;4!UBERON:0010133;1.50e-09;4!UBERON:0004921;4.87e-09;33!UBERON:0000922;5.82e-09;49!UBERON:0002108;6.78e-08;4!UBERON:0004907;6.78e-08;5!UBERON:0000002;7.17e-07;6!UBERON:0001560;7.17e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,5.48e-18,2;UBERON:0004801,5.48e-18,2;UBERON:0000007,1.07e-17,2;UBERON:0000160,3.49e-17,17;UBERON:0000059,5.10e-13,11;UBERON:0002114,3.24e-12,2;UBERON:0005409,3.79e-12,25;UBERON:0001052,1.32e-09,4;UBERON:0003296,1.57e-09,4;UBERON:0010133,1.57e-09,4;UBERON:0004907,6.13e-08,5;UBERON:0002108,7.49e-08,4;UBERON:0000002,7.17e-07,6;UBERON:0001560,7.17e-07,6 | |||
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|short_description=p@chr19:13710923..13710935,- | |short_description=p@chr19:13710923..13710935,- | ||
}} | }} |
Latest revision as of 04:07, 26 July 2015
Short description: | p@chr19:13710923..13710935, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13710923..13710935, - |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 5.48e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 5.48e-18 | 2 |
cervix epithelium | 5.48e-18 | 2 |
pituitary gland | 1.07e-17 | 2 |
intestine | 3.49e-17 | 17 |
large intestine | 5.10e-13 | 11 |
duodenum | 3.24e-12 | 2 |
gastrointestinal system | 3.79e-12 | 25 |
rectum | 1.32e-09 | 4 |
gland of diencephalon | 1.57e-09 | 4 |
neuroendocrine gland | 1.57e-09 | 4 |
lower digestive tract | 6.13e-08 | 5 |
small intestine | 7.49e-08 | 4 |
uterine cervix | 7.17e-07 | 6 |
neck of organ | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.35e-08 | 5 |