FFCP PHASE1:Hg19::chr1:114523947..114523968,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:114523947..114523968,+ | |||
|description=CAGE_peak_at_chr1:114523947..114523968,+ | |description=CAGE_peak_at_chr1:114523947..114523968,+ | ||
|id=chr1:114523947..114523968,+ | |id=chr1:114523947..114523968,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.87e-20!180;CL:0000057!2.77e-19!75;CL:0002620!3.35e-09!23;CL:0002334!1.04e-07!12;CL:0000034!5.04e-07!444;CL:0000048!8.96e-07!430 | |ontology_enrichment_celltype=CL:0000055!2.87e-20!180;CL:0000057!2.77e-19!75;CL:0002620!3.35e-09!23;CL:0002334!1.04e-07!12;CL:0000034!5.04e-07!444;CL:0000048!8.96e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0002570;3.28e-10;8!CL:0002334;1.36e-08;12!CL:0002577;2.49e-08;3!CL:0000135;8.09e-08;3!CL:0000388;8.09e-08;3!CL:0002615;1.00e-07;3!CL:0002559;3.34e-07;5!CL:0002620;5.19e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.36e-16,76;CL:0002570,2.55e-10,8;CL:0000136,5.14e-09,15;CL:0002334,1.62e-08,12;CL:0002577,2.58e-08,3;CL:0000048,3.53e-08,427;CL:0000135,6.13e-08,3;CL:0000388,6.13e-08,3;CL:0000034,6.68e-08,441;CL:0002320,7.57e-08,361;CL:0000723,7.64e-08,433;CL:0002615,1.30e-07,3;CL:0002559,2.39e-07,5;CL:0000134,2.77e-07,354;CL:0002620,6.11e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!2.93e-07!45;UBERON:0002416!2.93e-07!45;UBERON:0003102!6.04e-07!95 | |ontology_enrichment_uberon=UBERON:0002199!2.93e-07!45;UBERON:0002416!2.93e-07!45;UBERON:0003102!6.04e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.63e-09;14!UBERON:0004457;8.48e-09;9!UBERON:0000042;8.48e-09;9!UBERON:0007846;8.09e-08;3!UBERON:0000043;8.09e-08;3!UBERON:0007845;8.09e-08;3!UBERON:0002073;3.34e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.32e-09,14;UBERON:0002199,2.95e-09,46;UBERON:0002416,2.95e-09,46;UBERON:0007846,6.13e-08,3;UBERON:0000043,6.13e-08,3;UBERON:0007845,6.13e-08,3;UBERON:0002384,9.58e-08,371;UBERON:0002073,2.39e-07,5;UBERON:0005086,2.39e-07,5;UBERON:0002097,9.91e-07,41 | |||
|phase1_expression=2.18014055124668,5.35251309727458,1.26858963686374,3.00219895059391,4.91657203870017,0.872338524100369,7.59899634504932,0,0.783556884599516,0,0,3.27662058195258,6.33040747748289,0.247532705920093,0.331397375727916,0.672325146451775,0,0,0,0.369363174230364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,1.50401373190767,1.73815822752988,1.5905718941022,0,0.189069634328136,0.221729397462564,0.087834785693126,0,0,0,0.324547393654683,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22031028774085,0,0.81014194788176,0,0,0,0,0,0,0,0,0,1.49091585508596,0.759783069987479,0.264818361626438,3.44203944898576,0.709336764396714,1.12135520028461,0,0,0.311211035399766,0.269421344139376,0,1.21085942115945,0.576175924479999,0,0,0,0.448346041655403,0.704606991862589,0.161872944368132,0.280901613404497,0,0.122834317311768,0.413303124703062,3.56400857184616,2.71993622206413,0,2.15585442544872,0,0.250237039743928,0,0.877955241761676,4.90380473278431,1.80285670687916,0.226864366320042,0.538168907066586,1.49490172172997,0.847727604638247,0.900273288253207,1.75189299705346,1.03056216018252,0.558350568994769,1.18143432568886,1.36411807225678,1.51460264546469,1.47279837827679,1.45481451136931,2.4850671476163,1.20902517873168,0,0,0.272746120590835,0,0.975789649036763,0.530119073285941,0.813357600086629,0.518305275076852,1.51392510525377,0.72995471815166,1.56449532329816,1.92972281457866,0,2.3218396401599,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0.288732895522148,0.462985512576611,0,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0,0.517086863031111,7.15312891703765,0,0,0,0,0,0.266422179016099,1.00084595560703,1.62786481617433,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0,1.14861935834114,0,0.723906533337896,2.67119219315498,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.613457458595699,1.00034104211935,0.271265023699736,0,1.78428988797162,0.788512075169673,0.117141414992713,0.902838299183157,9.09630016223939,0,0.664225598535437,0.737476674166813,0.434418072340414,0.587403472388222,2.40200396667599,0,0,0,3.03127571446259,3.32870879020994,10.8860505598685,0.248107807818777,0.460385919864187,3.64858122762996,0.896974044789907,1.02341449813341,0,1.48418066444991,3.23840356985577,3.01854933032316,0.328508624055237,3.11552657510173,2.67283870457906,0.725156697549733,0,0,0.34444334449382,0.364182336013434,1.31124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48335359146061,0,0.460511024178389,0.275673144969061,1.71872391789238,3.0453505721988,0.426133137080504,0.623224249527161,0,0,0,0,0,2.51849877464512,0.6970372701606,0,0,0,0,0,0,0.632758849437452,0.38126038784765,0,1.28381696410176,0,0,0.899362287916574,2.19629623788844,0.589062011728432,0,0,0,0,0.487426979262569,0,0.272999822815972,1.83827061539827,0,0,0,0,0,0.655894752046633,0.202910376962704,0.92947049429925,0.845086807596724,0.143411352204052,0.196498082026242,0,0.709522128141196,2.53329162357197,4.28083360847872,0.379473173765715,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0.614321404198464,0,0,0,0,0,1.19548792950642,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23120413606075,0.113942055847001,0,0,0,0,0.915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0.171986032471617,0,0,0,0.193978032976839,0,1.35588444468319,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0.288950589901519,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0,0,0,0,1.12527203925513,0.687697182986169,2.9080823662043,0,0,0,0,0,0.314727528809989,0,0,0,0,0,0,6.51599522104455,0,4.89881040164114,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0.171086837884329,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,2.38807684618998,2.80455971816669,1.66441758450784,0.757612021100357,1.50940741051545,0,0.228840068396924,1.81477108515887,1.86524640699337,0.295710299979268,0.318593534327405,0,0.155262956876259,1.24411862352257,0.53168342911599,0,2.55437935295271,0,0.406870733204662,0.727394636810238,0.966695013382396,0.464033759878494,0,13.2009162338841,2.40376993627955,5.05124233148879,0,0,0,0,0,0,0,0,0,0.21928404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| ||
|short_description=p@chr1:114523947..114523968,+ | |short_description=p@chr1:114523947..114523968,+ | ||
}} | }} |
Latest revision as of 19:57, 27 July 2015
Short description: | p@chr1:114523947..114523968, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:114523947..114523968, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.36e-16 | 76 |
mesenchymal stem cell of adipose | 2.55e-10 | 8 |
fat cell | 5.14e-09 | 15 |
preadipocyte | 1.62e-08 | 12 |
placental epithelial cell | 2.58e-08 | 3 |
multi fate stem cell | 3.53e-08 | 427 |
fibrocyte | 6.13e-08 | 3 |
tendon cell | 6.13e-08 | 3 |
stem cell | 6.68e-08 | 441 |
connective tissue cell | 7.57e-08 | 361 |
somatic stem cell | 7.64e-08 | 433 |
adipocyte of omentum tissue | 1.30e-07 | 3 |
hair follicle cell | 2.39e-07 | 5 |
mesenchymal cell | 2.77e-07 | 354 |
skin fibroblast | 6.11e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 1.32e-09 | 14 |
integument | 2.95e-09 | 46 |
integumental system | 2.95e-09 | 46 |
dense regular connective tissue | 6.13e-08 | 3 |
tendon | 6.13e-08 | 3 |
regular connective tissue | 6.13e-08 | 3 |
connective tissue | 9.58e-08 | 371 |
hair follicle | 2.39e-07 | 5 |
hair follicle placode | 2.39e-07 | 5 |
skin of body | 9.91e-07 | 41 |