FFCP PHASE1:Hg19::chr1:153123359..153123372,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6706 | |EntrezGene=6706 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11267 | |HGNC=11267 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYE4 | |UniProt=Q9BYE4 | ||
|association_with_transcript=-14bp_to_ENST00000368748_5end | |association_with_transcript=-14bp_to_ENST00000368748_5end | ||
|cluster_id=chr1:153123359..153123372,- | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_1_at_SPRR2G_5end | |description=CAGE_peak_1_at_SPRR2G_5end | ||
|id=chr1:153123359..153123372,- | |id=chr1:153123359..153123372,- | ||
|ontology_enrichment_celltype=CL:0002159!6.60e-20!13;CL:0000622!1.75e-14!5;CL:0002077!3.46e-13!33;CL:0000154!5.45e-12!6;CL:0002166!2.05e-09!3;CL:0002541!2.29e-09!3;CL:0002623!2.36e-09!3;CL:0002621!2.78e-09!3;CL:0000362!5.52e-09!8;CL:0002251!9.05e-09!21;CL:0000453!1.83e-08!5;CL:0000150!7.88e-08!9;CL:0000240!7.98e-08!6;CL:0000311!7.98e-08!6;CL:0000079!7.98e-08!6;CL:0000237!7.98e-08!6;CL:0000036!7.98e-08!6;CL:0000357!7.98e-08!6;CL:0000114!7.98e-08!6;CL:0002076!2.57e-07!43;CL:0000317!8.35e-07!2;CL:1000448!8.35e-07!2;CL:0002308!8.35e-07!2;CL:0002140!8.35e-07!2 | |ontology_enrichment_celltype=CL:0002159!6.60e-20!13;CL:0000622!1.75e-14!5;CL:0002077!3.46e-13!33;CL:0000154!5.45e-12!6;CL:0002166!2.05e-09!3;CL:0002541!2.29e-09!3;CL:0002623!2.36e-09!3;CL:0002621!2.78e-09!3;CL:0000362!5.52e-09!8;CL:0002251!9.05e-09!21;CL:0000453!1.83e-08!5;CL:0000150!7.88e-08!9;CL:0000240!7.98e-08!6;CL:0000311!7.98e-08!6;CL:0000079!7.98e-08!6;CL:0000237!7.98e-08!6;CL:0000036!7.98e-08!6;CL:0000357!7.98e-08!6;CL:0000114!7.98e-08!6;CL:0002076!2.57e-07!43;CL:0000317!8.35e-07!2;CL:1000448!8.35e-07!2;CL:0002308!8.35e-07!2;CL:0002140!8.35e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000622;6.57e-29;5!CL:0002159;1.14e-25;14!CL:0000154;4.50e-24;6!CL:0002166;3.55e-18;3!CL:0002541;3.88e-18;3!CL:0002623;5.19e-18;3!CL:0002621;7.34e-18;3!CL:0000362;3.04e-16;9!CL:0000150;5.37e-16;9!CL:0002077;5.72e-13;34!CL:0000317;1.11e-12;2!CL:1000448;1.11e-12;2!CL:0002308;1.11e-12;2!CL:0002140;1.11e-12;2!CL:0000312;2.74e-11;5!CL:0002251;7.34e-10;20!CL:0000240;1.75e-09;6!CL:0000311;1.75e-09;6!CL:0000079;1.75e-09;6!CL:0000237;1.75e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,6.20e-29,5;CL:0002159,1.18e-25,14;CL:0000154,4.29e-24,6;CL:0002166,3.55e-18,3;CL:0002541,4.49e-18,3;CL:0002623,4.75e-18,3;CL:0002621,6.73e-18,3;CL:0000362,3.14e-16,9;CL:0000150,5.20e-16,9;CL:0002077,2.41e-15,34;CL:0000317,1.14e-12,2;CL:1000448,1.14e-12,2;CL:0002308,1.14e-12,2;CL:0002140,1.14e-12,2;CL:0000312,2.78e-11,5;CL:0002251,6.99e-10,20;CL:0000240,1.77e-09,6;CL:0000311,1.77e-09,6;CL:0000079,1.77e-09,6;CL:0000237,1.77e-09,6;CL:0000036,1.77e-09,6;CL:0000357,1.77e-09,6;CL:0000114,1.77e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000357;1.75e-09;6!CL:0000114;1.75e-09;6!UBERON:0004874;3.20e-07;1!UBERON:0003124;3.60e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;3.82e-07;1!DOID:3149;3.82e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.82e-07,1;DOID:3149,3.82e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000166!7.38e-14!21;UBERON:0000165!1.08e-13!28;UBERON:0000930!1.08e-13!28;UBERON:0003102!4.03e-11!95;UBERON:0000161!4.52e-10!35;UBERON:0003124!7.12e-10!7;UBERON:0003408!1.73e-09!10;UBERON:0000476!2.29e-09!3;UBERON:0000920!2.29e-09!3;UBERON:0001949!2.78e-09!3;UBERON:0001444!4.39e-09!48;UBERON:0000078!9.50e-09!18;UBERON:0001004!1.63e-08!72;UBERON:0001044!1.11e-07!6;UBERON:0003293!1.11e-07!6;UBERON:0003294!1.11e-07!6;UBERON:0010047!1.11e-07!6;UBERON:0000167!1.11e-07!6;UBERON:0001708!3.93e-07!4;UBERON:0001704!3.93e-07!4;UBERON:0001042!5.71e-07!10;UBERON:0009145!5.71e-07!10;UBERON:0001003!6.25e-07!14;UBERON:0007376!6.25e-07!14;UBERON:0007383!6.25e-07!14;UBERON:0002419!8.35e-07!2;UBERON:0007771!8.35e-07!2;UBERON:0003297!8.35e-07!2;UBERON:0001821!8.35e-07!2;UBERON:0003487!8.35e-07!2;UBERON:0001820!8.35e-07!2;UBERON:0005089!8.35e-07!2;UBERON:0005088!8.35e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.88e-18;3!UBERON:0000920;3.88e-18;3!UBERON:0001949;7.34e-18;3!UBERON:0000165;2.26e-15;28!UBERON:0000161;5.81e-14;19!UBERON:0000166;5.81e-14;19!UBERON:0001708;9.05e-14;4!UBERON:0008895;9.05e-14;4!UBERON:0010371;1.02e-13;31!UBERON:0001003;1.03e-13;15!UBERON:0007376;1.03e-13;15!UBERON:0002419;1.11e-12;2!UBERON:0007771;1.11e-12;2!UBERON:0003297;1.11e-12;2!UBERON:0001821;1.11e-12;2!UBERON:0003487;1.11e-12;2!UBERON:0001820;1.11e-12;2!UBERON:0002370;5.71e-12;2!UBERON:0005058;5.71e-12;2!UBERON:0009113;5.71e-12;2!UBERON:0011159;4.07e-11;5!UBERON:0005631;1.78e-09;10!UBERON:0000158;1.78e-09;10!UBERON:0001044;2.92e-09;6!UBERON:0003293;2.92e-09;6!UBERON:0003294;2.92e-09;6!UBERON:0010047;2.92e-09;6!UBERON:0003408;2.92e-09;6!UBERON:0000167;2.92e-09;6!UBERON:0001723;3.27e-09;3!UBERON:0001033;3.27e-09;3!UBERON:0003929;6.13e-08;7!UBERON:0007029;1.98e-07;1!UBERON:0000989;3.20e-07;1!UBERON:0008811;3.20e-07;1!UBERON:0003350;5.33e-07;8!UBERON:0001828;5.33e-07;8!UBERON:0002372;6.12e-07;1!UBERON:0001961;6.12e-07;1!UBERON:0001744;6.12e-07;1!UBERON:0001042;6.12e-07;1!UBERON:0001735;6.12e-07;1!UBERON:0000014;7.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,5.27e-20,22;UBERON:0000920,4.49e-18,3;UBERON:0001949,6.73e-18,3;UBERON:0003102,3.22e-17,99;UBERON:0000153,2.36e-15,62;UBERON:0007811,2.36e-15,62;UBERON:0008814,4.87e-15,18;UBERON:0000165,8.20e-15,29;UBERON:0000930,8.20e-15,29;UBERON:0001042,2.50e-14,10;UBERON:0009145,2.50e-14,10;UBERON:0003408,4.63e-14,10;UBERON:0001708,9.05e-14,4;UBERON:0008895,9.05e-14,4;UBERON:0001003,1.06e-13,15;UBERON:0007376,1.06e-13,15;UBERON:0007383,1.06e-13,15;UBERON:0003124,1.61e-13,7;UBERON:0006562,5.24e-13,11;UBERON:0002419,1.14e-12,2;UBERON:0007771,1.14e-12,2;UBERON:0003297,1.14e-12,2;UBERON:0001821,1.14e-12,2;UBERON:0003487,1.14e-12,2;UBERON:0001820,1.14e-12,2;UBERON:0005089,1.14e-12,2;UBERON:0005088,1.14e-12,2;UBERON:0000033,1.29e-12,56;UBERON:0000161,1.22e-11,36;UBERON:0011159,4.07e-11,5;UBERON:0005631,3.52e-10,14;UBERON:0000158,3.52e-10,14;UBERON:0010188,2.43e-09,6;UBERON:0002539,2.43e-09,6;UBERON:0008816,2.43e-09,6;UBERON:0001044,2.80e-09,6;UBERON:0003293,2.80e-09,6;UBERON:0003294,2.80e-09,6;UBERON:0010047,2.80e-09,6;UBERON:0000167,2.80e-09,6;UBERON:0001723,3.27e-09,3;UBERON:0001033,3.27e-09,3;UBERON:0010056,3.27e-09,3;UBERON:0001444,3.71e-08,49;UBERON:0007029,1.98e-07,1;UBERON:0001557,1.99e-07,19;UBERON:0001004,2.25e-07,74;UBERON:0000989,3.20e-07,1;UBERON:0008811,3.20e-07,1;UBERON:0006258,3.20e-07,1;UBERON:0005876,3.20e-07,1;UBERON:0004874,3.20e-07,1;UBERON:0003350,5.17e-07,8;UBERON:0001828,5.17e-07,8;UBERON:0002372,6.12e-07,1;UBERON:0001961,6.12e-07,1;UBERON:0001744,6.12e-07,1;UBERON:0001735,6.12e-07,1;UBERON:0000014,7.31e-07,4 | |||
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| ||
|short_description=p1@SPRR2G | |short_description=p1@SPRR2G | ||
}} | }} |
Latest revision as of 04:42, 17 September 2015
Short description: | p1@SPRR2G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPRR2G_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | -14bp_to_ENST00000368748_5end |
EntrezGene: | SPRR2G |
HGNC: | 11267 |
UniProt: | Q9BYE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 6.20e-29 | 5 |
general ecto-epithelial cell | 1.18e-25 | 14 |
protein secreting cell | 4.29e-24 | 6 |
epithelial cell of Malassez | 3.55e-18 | 3 |
chorionic membrane mesenchymal stem cell | 4.49e-18 | 3 |
acinar cell of salivary gland | 4.75e-18 | 3 |
gingival epithelial cell | 6.73e-18 | 3 |
epidermal cell | 3.14e-16 | 9 |
glandular epithelial cell | 5.20e-16 | 9 |
ecto-epithelial cell | 2.41e-15 | 34 |
sebum secreting cell | 1.14e-12 | 2 |
epithelial cell of sweat gland | 1.14e-12 | 2 |
epithelial cell of skin gland | 1.14e-12 | 2 |
acinar cell of sebaceous gland | 1.14e-12 | 2 |
keratinocyte | 2.78e-11 | 5 |
epithelial cell of alimentary canal | 6.99e-10 | 20 |
stratified squamous epithelial cell | 1.77e-09 | 6 |
keratin accumulating cell | 1.77e-09 | 6 |
stratified epithelial cell | 1.77e-09 | 6 |
keratinizing barrier epithelial cell | 1.77e-09 | 6 |
epithelial fate stem cell | 1.77e-09 | 6 |
stratified epithelial stem cell | 1.77e-09 | 6 |
surface ectodermal cell | 1.77e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.82e-07 | 1 |
keratoacanthoma | 3.82e-07 | 1 |