FFCP PHASE1:Hg19::chr1:183204745..183204775,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C268 | |||
|description=CAGE_peak_at_chr1:183204745..183204775,+ | |||
|id=chr1:183204745..183204775,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.23e-36!254;CL:0002076!1.74e-28!43;CL:0000223!1.70e-18!59;CL:0002159!1.39e-15!13;CL:0002368!2.69e-15!13;CL:0002077!4.47e-14!33;CL:0002251!1.04e-11!21;CL:0000220!2.18e-11!246;CL:0002321!3.51e-11!248;CL:0000244!5.99e-10!4;CL:0000731!5.99e-10!4;CL:0000076!1.31e-09!62;CL:0000063!3.24e-08!578;CL:0002202!3.88e-08!9;CL:0002632!3.88e-08!9;CL:0002166!1.26e-07!3;CL:0002621!1.26e-07!3;CL:0002328!2.05e-07!3;CL:0000622!2.51e-07!5;CL:0002231!5.19e-07!3;CL:0000362!6.41e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002159;6.36e-31;14!CL:0002368;1.34e-26;13!CL:0002076;4.33e-26;42!CL:0000244;5.67e-24;4!CL:0000731;5.67e-24;4!CL:0002621;9.14e-18;3!CL:0000362;1.77e-15;9!CL:0000240;3.50e-15;6!CL:0000311;3.50e-15;6!CL:0000079;3.50e-15;6!CL:0000237;3.50e-15;6!CL:0002077;3.87e-15;34!CL:0000317;3.92e-12;2!CL:1000448;3.92e-12;2!CL:0002308;3.92e-12;2!CL:0002140;3.92e-12;2!CL:0002536;5.34e-12;2!CL:0000575;1.57e-11;2!CL:0000312;8.71e-11;5!CL:0000622;1.58e-10;5!CL:0002202;4.50e-10;9!CL:0002632;4.50e-10;9!CL:0002251;1.86e-09;20!CL:0002166;6.80e-09;3!CL:0000154;7.50e-09;6!CL:0002231;1.06e-08;3!CL:0002328;1.60e-08;3!CL:0000307;3.37e-08;3!CL:0002336;9.24e-07;1!CL:0002261;9.24e-07;1!CL:0002170;9.24e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,5.72e-31,14;CL:0002076,8.99e-31,42;CL:0002368,1.23e-26,13;CL:0000244,6.19e-24,4;CL:0000731,6.19e-24,4;CL:0000066,1.46e-22,253;CL:0000223,2.46e-21,58;CL:0002621,9.68e-18,3;CL:0002077,1.31e-17,34;CL:0000362,1.91e-15,9;CL:0000240,3.63e-15,6;CL:0000311,3.63e-15,6;CL:0000079,3.63e-15,6;CL:0000237,3.63e-15,6;CL:0000036,3.63e-15,6;CL:0000357,3.63e-15,6;CL:0000114,3.63e-15,6;CL:0000317,3.92e-12,2;CL:1000448,3.92e-12,2;CL:0002308,3.92e-12,2;CL:0002140,3.92e-12,2;CL:0002536,5.81e-12,2;CL:0000575,1.26e-11,2;CL:0000312,9.47e-11,5;CL:0002321,1.36e-10,250;CL:0000622,1.41e-10,5;CL:0002202,4.19e-10,9;CL:0002632,4.19e-10,9;CL:0002251,1.79e-09,20;CL:0002166,6.42e-09,3;CL:0000154,6.82e-09,6;CL:0002231,1.02e-08,3;CL:0002328,1.38e-08,3;CL:0000221,2.07e-08,72;CL:0000068,3.50e-08,3;CL:0000069,3.50e-08,3;CL:0000307,3.50e-08,3;CL:0000377,3.50e-08,3;CL:0002336,8.49e-07,1;CL:0002261,8.49e-07,1;CL:0002170,8.49e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000357;3.50e-15;6!CL:0000114;3.50e-15;6!CL:0000223;6.14e-14;58!CL:0000377;3.37e-08;3 | |||
|ontology_enrichment_disease=DOID:1749!1.45e-11!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!2.10e-11!44;UBERON:0000365!3.94e-11!5;UBERON:0001008!4.86e-11!45;UBERON:0004119!4.89e-10!169;UBERON:0000925!4.89e-10!169;UBERON:0006595!4.89e-10!169;UBERON:0005910!3.53e-09!6;UBERON:0000161!4.12e-09!35;UBERON:0005911!1.88e-08!82;UBERON:0001949!1.26e-07!3;UBERON:0004815!2.05e-07!3;UBERON:0002031!2.05e-07!3;UBERON:0001004!3.50e-07!72;UBERON:0005153!3.67e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;5.98e-23;12!UBERON:0000365;3.24e-19;5!UBERON:0001949;9.14e-18;3!UBERON:0005910;4.88e-16;6!UBERON:0002419;3.92e-12;2!UBERON:0007771;3.92e-12;2!UBERON:0003297;3.92e-12;2!UBERON:0001821;3.92e-12;2!UBERON:0003487;3.92e-12;2!UBERON:0001820;3.92e-12;2!UBERON:0010371;2.35e-10;31!UBERON:0001003;3.38e-09;15!UBERON:0007376;3.38e-09;15!UBERON:0005911;5.26e-09;36!UBERON:0004815;1.60e-08;3!UBERON:0002031;1.60e-08;3!UBERON:0003929;6.88e-08;7!UBERON:0003729;4.20e-07;13!UBERON:0003350;5.93e-07;8!UBERON:0001828;5.93e-07;8!UBERON:0001708;7.27e-07;4!UBERON:0008895;7.27e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.48e-19,5;UBERON:0001949,9.68e-18,3;UBERON:0005910,5.17e-16,6;UBERON:0002419,3.92e-12,2;UBERON:0007771,3.92e-12,2;UBERON:0003297,3.92e-12,2;UBERON:0001821,3.92e-12,2;UBERON:0003487,3.92e-12,2;UBERON:0001820,3.92e-12,2;UBERON:0005089,3.92e-12,2;UBERON:0005088,3.92e-12,2;UBERON:0003102,4.11e-11,99;UBERON:0004119,9.45e-10,160;UBERON:0000925,9.45e-10,160;UBERON:0006595,9.45e-10,160;UBERON:0001003,3.54e-09,15;UBERON:0007376,3.54e-09,15;UBERON:0007383,3.54e-09,15;UBERON:0001004,1.33e-08,74;UBERON:0004815,1.38e-08,3;UBERON:0002031,1.38e-08,3;UBERON:0003729,4.17e-07,13;UBERON:0003350,6.05e-07,8;UBERON:0001828,6.05e-07,8;UBERON:0001708,6.97e-07,4;UBERON:0008895,6.97e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,3.27662058195258,2.37390280405608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,4.51808878167375,4.80680213216824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,1.82147644146271,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44499962275583,5.72766853240753,4.01526433544605,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26801369961403,2.24803506515239,5.32803553781643,2.87024179991442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,15.7903200506928,6.94697976487694,3.40322386270824,2.03443756959773,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,16.6420370351726,3.49907757956406,0,0,0,0,0.924184045252977,0,0,0.73886140225013,0,0,0,0,0,0,0.764628819135115,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,1.72279661398852,6.50060246036521,0,0,0,0,0,0,0,0,0,8.59481559877086,10.3782636377157,2.55225424989168,4.046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88666338176536,2.01090682660736,0,0,6.88808596273968,10.1082885400575,6.20802214951346,12.6347870113828,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.108647371922008,0,0.274792780205587,0,0,0,0,0,0,0,0,0,4.43095935508857,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0.391969589657511,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0.864328787928898,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.680117776536817,0,0,0.179088841081487,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.550285795565037,0.808679663052368,0,0,0,0,0,0,0,0.327543835020193,0.739280431085226,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0.47775168788705,0,0,0,0,0,2.90102629828252,0.85359238546975,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0.357107877211315,0.705789743431384,0.160482733378337,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:183204745..183204775,+ | |||
}} |
Revision as of 22:39, 10 January 2014
Short description: | p@chr1:183204745..183204775, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183204745..183204775, + |
Coexpression cluster: | C268_Mallassezderived_Urothelial_Gingival_Small_Bronchial_Tracheal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 3.48e-19 | 5 |
gingival epithelium | 9.68e-18 | 3 |
transitional epithelium | 5.17e-16 | 6 |
skin gland | 3.92e-12 | 2 |
epidermis gland | 3.92e-12 | 2 |
gland of integumental system | 3.92e-12 | 2 |
sebaceous gland | 3.92e-12 | 2 |
skin sebaceous gland | 3.92e-12 | 2 |
sweat gland | 3.92e-12 | 2 |
sweat gland placode | 3.92e-12 | 2 |
sebaceous gland placode | 3.92e-12 | 2 |
surface structure | 4.11e-11 | 99 |
endoderm-derived structure | 9.45e-10 | 160 |
endoderm | 9.45e-10 | 160 |
presumptive endoderm | 9.45e-10 | 160 |
skin epidermis | 3.54e-09 | 15 |
outer epithelium | 3.54e-09 | 15 |
enveloping layer of ectoderm | 3.54e-09 | 15 |
respiratory system | 1.33e-08 | 74 |
lower respiratory tract epithelium | 1.38e-08 | 3 |
epithelium of bronchus | 1.38e-08 | 3 |
mouth mucosa | 4.17e-07 | 13 |
epithelium of mucosa | 6.05e-07 | 8 |
gingiva | 6.05e-07 | 8 |
jaw skeleton | 6.97e-07 | 4 |
splanchnocranium | 6.97e-07 | 4 |