FFCP PHASE1:Hg19::chr1:186946659..186946664,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:186946659..186946664,+ | |||
|id=chr1:186946659..186946664,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.82e-28!24;CL:0000222!1.31e-22!119;CL:0002543!7.23e-22!6;CL:0000071!1.37e-21!18;CL:0002546!1.37e-21!18;CL:0000359!1.06e-19!32;CL:0000115!1.03e-18!35;CL:0002078!7.07e-17!44;CL:0002618!1.53e-16!3;CL:0000192!2.00e-14!42;CL:0000514!2.00e-14!42;CL:0000213!2.17e-12!57;CL:0000215!2.17e-12!57;CL:0000680!8.70e-12!57;CL:0000056!8.70e-12!57;CL:0000355!8.70e-12!57;CL:0000183!2.61e-11!59;CL:0002589!8.65e-11!2;CL:0000187!1.10e-10!54;CL:0002595!1.49e-09!5;CL:0000393!2.23e-09!60;CL:0000211!2.23e-09!60;CL:0000220!9.33e-09!246;CL:0002321!1.22e-08!248;CL:0005020!2.04e-08!6;CL:0002138!2.04e-08!6;CL:0005022!2.04e-08!6;CL:0002592!1.99e-07!3;CL:0000055!4.22e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002543;8.03e-43;6!CL:0002618;1.49e-38;3!CL:0002139;1.06e-29;24!CL:0002138;7.13e-20;6!CL:0000071;7.35e-15;18!CL:0000115;2.97e-14;36!CL:0002078;4.82e-09;45!CL:0000213;3.25e-08;58!CL:0000215;3.25e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,8.63e-43,6;CL:0002618,1.23e-38,3;CL:0002139,1.03e-29,24;CL:0000115,5.60e-20,36;CL:0005020,6.48e-20,6;CL:0002138,6.48e-20,6;CL:0005022,6.48e-20,6;CL:0002078,4.53e-16,45;CL:0000071,7.52e-15,18;CL:0002546,7.52e-15,18;CL:0000213,1.49e-12,58;CL:0000215,1.49e-12,58 | |||
|ontology_enrichment_development_v019=CL:0005022;7.13e-20;6!CL:0002546;7.35e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;1.33e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.33e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0000055!8.40e-40!69;UBERON:0001981!3.42e-35!60;UBERON:0007500!3.42e-35!60;UBERON:0004537!3.42e-35!60;UBERON:0006965!3.42e-35!60;UBERON:0002049!4.84e-34!79;UBERON:0007798!4.84e-34!79;UBERON:0004872!1.58e-28!84;UBERON:0004535!4.86e-27!110;UBERON:0001009!3.67e-26!113;UBERON:0001637!4.23e-23!42;UBERON:0003509!4.23e-23!42;UBERON:0004572!4.23e-23!42;UBERON:0001986!1.37e-21!18;UBERON:0004638!1.37e-21!18;UBERON:0004852!1.37e-21!18;UBERON:0003914!1.53e-20!118;UBERON:0001638!3.91e-20!9;UBERON:0003920!3.91e-20!9;UBERON:0004582!3.91e-20!9;UBERON:0004573!4.04e-19!33;UBERON:0004571!4.04e-19!33;UBERON:0006914!1.62e-18!25;UBERON:0000487!2.27e-17!22;UBERON:0002066!1.26e-16!5;UBERON:0000490!2.53e-15!138;UBERON:0003081!8.60e-13!216;UBERON:0004290!2.21e-12!70;UBERON:0000486!1.21e-11!82;UBERON:0001134!7.71e-11!61;UBERON:0002036!7.71e-11!61;UBERON:0003082!7.71e-11!61;UBERON:0001529!8.65e-11!2;UBERON:0007204!8.65e-11!2;UBERON:0002385!2.07e-10!63;UBERON:0001015!2.07e-10!63;UBERON:0000383!2.07e-10!63;UBERON:0000025!3.08e-10!194;UBERON:0004111!5.93e-10!241;UBERON:0000914!6.02e-10!83;UBERON:0002329!6.02e-10!83;UBERON:0003077!6.02e-10!83;UBERON:0003059!6.02e-10!83;UBERON:0007282!6.02e-10!83;UBERON:0009618!6.02e-10!83;UBERON:0007285!6.02e-10!83;UBERON:0003834!1.49e-09!5;UBERON:0001533!1.49e-09!5;UBERON:0000477!4.70e-09!286;UBERON:0000483!1.32e-08!309;UBERON:0000119!1.85e-08!312;UBERON:0001621!1.99e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001638;7.15e-29;9!UBERON:0003920;7.15e-29;9!UBERON:0004582;7.15e-29;9!UBERON:0002066;1.28e-23;5!UBERON:0001473;3.53e-15;8!UBERON:0004536;3.53e-15;8!UBERON:0006558;3.53e-15;8!UBERON:0004638;7.35e-15;18!UBERON:0001986;7.35e-15;18!UBERON:0004852;7.35e-15;18!UBERON:0010260;1.31e-13;9!UBERON:0002465;2.37e-12;10!UBERON:0000487;2.69e-12;22!UBERON:0006914;6.58e-11;25!UBERON:0000490;6.08e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001638,7.50e-29,9;UBERON:0003920,7.50e-29,9;UBERON:0004582,7.50e-29,9;UBERON:0002066,1.14e-23,5;UBERON:0001473,3.29e-15,8;UBERON:0004536,3.29e-15,8;UBERON:0006558,3.29e-15,8;UBERON:0004638,7.52e-15,18;UBERON:0001986,7.52e-15,18;UBERON:0004852,7.52e-15,18;UBERON:0010260,1.23e-13,9;UBERON:0002465,2.24e-12,10;UBERON:0000487,2.74e-12,22;UBERON:0006914,6.69e-11,25;UBERON:0000055,9.32e-11,68;UBERON:0002049,2.04e-09,78;UBERON:0007798,2.04e-09,78;UBERON:0004535,8.33e-07,109 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0,0.81014194788176,0.714397826272638,1.57170560838319,3.26573293401634,1.53316637465883,0,0.916008719652036,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695582429850461,0,1.73239737313289,0.462985512576611,3.23432058798817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,1.53403023753232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0710797781803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:186946659..186946664,+ | |||
}} |
Revision as of 22:56, 10 January 2014
Short description: | p@chr1:186946659..186946664, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:186946659..186946664, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 8.63e-43 | 6 |
endothelial cell of umbilical vein | 1.23e-38 | 3 |
endothelial cell of vascular tree | 1.03e-29 | 24 |
endothelial cell | 5.60e-20 | 36 |
lymphangioblast | 6.48e-20 | 6 |
endothelial cell of lymphatic vessel | 6.48e-20 | 6 |
vascular lymphangioblast | 6.48e-20 | 6 |
meso-epithelial cell | 4.53e-16 | 45 |
blood vessel endothelial cell | 7.52e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.52e-15 | 18 |
lining cell | 1.49e-12 | 58 |
barrier cell | 1.49e-12 | 58 |
Ontology term | p-value | n |
---|---|---|
vein | 7.50e-29 | 9 |
venous blood vessel | 7.50e-29 | 9 |
venous system | 7.50e-29 | 9 |
umbilical vein | 1.14e-23 | 5 |
lymphatic vessel | 3.29e-15 | 8 |
lymph vasculature | 3.29e-15 | 8 |
lymphatic part of lymphoid system | 3.29e-15 | 8 |
blood vessel endothelium | 7.52e-15 | 18 |
endothelium | 7.52e-15 | 18 |
cardiovascular system endothelium | 7.52e-15 | 18 |
umbilical blood vessel | 1.23e-13 | 9 |
lymphoid system | 2.24e-12 | 10 |
simple squamous epithelium | 2.74e-12 | 22 |
squamous epithelium | 6.69e-11 | 25 |
vessel | 9.32e-11 | 68 |
vasculature | 2.04e-09 | 78 |
vascular system | 2.04e-09 | 78 |
cardiovascular system | 8.33e-07 | 109 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.33e-29 | 1 |