FFCP PHASE1:Hg19::chr1:41898930..41898936,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr1:41898930..41898936,+ | |||
|id=chr1:41898930..41898936,+ | |||
|ontology_enrichment_celltype=CL:0000243!1.09e-13!15;CL:0000125!1.09e-13!15;CL:0000030!1.09e-13!15;CL:0000339!1.09e-13!15;CL:0000095!3.44e-12!17;CL:0000123!3.44e-12!17;CL:0002603!1.16e-09!3;CL:0000128!4.01e-09!7;CL:0000126!4.01e-09!7;CL:0000127!4.01e-09!7;CL:0002453!4.01e-09!7;CL:0002319!2.08e-08!25;CL:0000133!2.70e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002586;5.96e-34;3!CL:0000149;7.14e-26;4!CL:0000128;1.65e-15;7!CL:0000126;1.65e-15;7!CL:0000127;1.65e-15;7!CL:0000147;2.00e-08;14!CL:0000243;3.38e-07;15!CL:0000125;3.38e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,5.96e-34,3;CL:0000149,7.14e-26,4;CL:0000128,1.65e-15,7;CL:0000126,1.65e-15,7;CL:0000127,1.65e-15,7;CL:0002453,1.65e-15,7;CL:0000147,2.00e-08,14;CL:0000243,3.38e-07,15;CL:0000125,3.38e-07,15;CL:0000030,3.38e-07,15;CL:0000339,3.38e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.16e-10;10!CL:0000339;3.38e-07;15 | |||
|ontology_enrichment_disease=DOID:3093!3.05e-09!11 | |||
|ontology_enrichment_disease_v019=DOID:3093;1.22e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.22e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0003076!3.12e-34!15;UBERON:0003057!3.12e-34!15;UBERON:0005743!2.02e-31!86;UBERON:0000073!6.57e-31!94;UBERON:0001016!6.57e-31!94;UBERON:0002298!3.33e-29!8;UBERON:0001017!6.79e-27!82;UBERON:0004733!3.60e-26!12;UBERON:0002028!3.60e-26!12;UBERON:0007277!3.60e-26!12;UBERON:0000955!6.64e-26!69;UBERON:0006238!6.64e-26!69;UBERON:0001049!4.09e-25!57;UBERON:0005068!4.09e-25!57;UBERON:0006241!4.09e-25!57;UBERON:0007135!4.09e-25!57;UBERON:0004732!4.27e-24!13;UBERON:0003075!6.79e-23!86;UBERON:0007284!6.79e-23!86;UBERON:0002346!1.01e-21!90;UBERON:0000033!9.08e-21!123;UBERON:0004121!1.05e-20!169;UBERON:0000988!1.44e-20!3;UBERON:0006331!3.62e-20!3;UBERON:0000924!4.01e-20!173;UBERON:0006601!4.01e-20!173;UBERON:0000153!1.29e-19!129;UBERON:0007811!1.29e-19!129;UBERON:0002680!3.49e-18!9;UBERON:0001895!3.49e-18!9;UBERON:0010092!3.49e-18!9;UBERON:0002616!3.94e-18!59;UBERON:0002148!3.21e-14!2;UBERON:0009662!3.21e-14!2;UBERON:0002308!1.10e-11!9;UBERON:0000125!1.10e-11!9;UBERON:0002020!1.90e-10!34;UBERON:0003528!1.90e-10!34;UBERON:0001896!7.15e-10!3;UBERON:0005290!7.15e-10!3;UBERON:0010096!7.15e-10!3;UBERON:0002240!7.81e-10!3;UBERON:0007023!1.49e-09!115;UBERON:0003056!1.70e-08!61;UBERON:0001893!6.46e-08!34;UBERON:0002038!1.11e-07!1;UBERON:0009661!1.11e-07!1;UBERON:0002902!1.26e-07!1;UBERON:0009899!1.26e-07!1;UBERON:0007190!1.75e-07!1;UBERON:0002581!1.87e-07!1;UBERON:0000064!9.11e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;5.96e-34;3!UBERON:0001782;5.96e-34;3!UBERON:0000966;5.15e-21;5!UBERON:0005388;5.15e-21;5!UBERON:0001802;5.15e-21;5!UBERON:0007625;2.37e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,5.96e-34,3;UBERON:0005424,5.96e-34,3;UBERON:0001781,7.14e-26,4;UBERON:0000966,9.07e-18,6;UBERON:0005388,9.07e-18,6;UBERON:0001802,9.07e-18,6;UBERON:0007625,2.37e-10,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95227036798582,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,3.27259784006895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0.407712618220842,0.313808538937,0.407992870545287,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:41898930..41898936,+ | |||
}} |
Revision as of 18:07, 10 January 2014
Short description: | p@chr1:41898930..41898936, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:41898930..41898936, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 5.96e-34 | 3 |
visual pigment cell | 7.14e-26 | 4 |
oligodendrocyte | 1.65e-15 | 7 |
macroglial cell | 1.65e-15 | 7 |
astrocyte | 1.65e-15 | 7 |
oligodendrocyte precursor cell | 1.65e-15 | 7 |
pigment cell | 2.00e-08 | 14 |
glial cell (sensu Vertebrata) | 3.38e-07 | 15 |
glial cell | 3.38e-07 | 15 |
glioblast | 3.38e-07 | 15 |
glioblast (sensu Vertebrata) | 3.38e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 5.96e-34 | 3 |
presumptive retinal pigmented epithelium | 5.96e-34 | 3 |
layer of retina | 7.14e-26 | 4 |
retina | 9.07e-18 | 6 |
photoreceptor array | 9.07e-18 | 6 |
posterior segment of eyeball | 9.07e-18 | 6 |
pigment epithelium of eye | 2.37e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.22e-09 | 11 |