FFCP PHASE1:Hg19::chr20:13201904..13201957,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:13201904..13201957,+
|short_description=p1@ISM1
|description=CAGE_peak_1_at_ISM1_5end
|association_with_transcript=-460bp_to_ENST00000262487,NM_080826,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140862 | |EntrezGene=140862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16213 | |HGNC=16213 | ||
|TSSclassifier=strong | |||
|UniProt=B1AKI9 | |UniProt=B1AKI9 | ||
|association_with_transcript=-460bp_to_ENST00000262487,NM_080826,uc010gce.1_5end | |||
|cluster_id=chr20:13201904..13201957,+ | |||
|description=CAGE_peak_1_at_ISM1_5end | |||
|id=chr20:13201904..13201957,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002159;3.65e-08;14!CL:0000153;1.03e-07;9!CL:0000447;1.03e-07;9!CL:0002540;2.42e-07;6!CL:0000062;7.08e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,2.37e-08,14;CL:0000153,1.04e-07,9;CL:0000447,1.04e-07,9;CL:0002540,3.61e-07,6;CL:0000062,7.06e-07,11;CL:0000375,7.06e-07,11;CL:0000335,7.06e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000165!7.07e-11!28;UBERON:0000930!7.07e-11!28;UBERON:0001007!3.87e-09!155;UBERON:0001555!3.87e-09!155;UBERON:0007026!3.87e-09!155;UBERON:0003102!2.85e-08!95;UBERON:0000166!1.63e-07!21;UBERON:0004119!3.05e-07!169;UBERON:0000925!3.05e-07!169;UBERON:0006595!3.05e-07!169;UBERON:0007023!7.74e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001434;9.55e-14;36!UBERON:0000165;1.33e-10;28!UBERON:0004765;3.08e-10;26!UBERON:0001828;1.39e-09;8!UBERON:0004905;1.75e-07;8!UBERON:0000982;1.75e-07;8!UBERON:0004770;1.75e-07;8!UBERON:0001474;2.43e-07;18!UBERON:0000075;4.21e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000165,4.68e-10,29;UBERON:0000930,4.68e-10,29;UBERON:0001828,1.44e-09,8;UBERON:0003102,2.62e-08,99;UBERON:0004905,8.46e-08,8;UBERON:0000982,8.46e-08,8;UBERON:0004770,8.46e-08,8;UBERON:0001007,9.29e-08,145;UBERON:0001555,9.29e-08,145;UBERON:0007026,9.29e-08,145;UBERON:0000075,2.08e-07,16;UBERON:0011137,2.59e-07,14;UBERON:0000166,6.13e-07,22 | |||
|phase1_expression=4.72363786103447,2.14100523890983,0.704772020479856,3.00219895059391,0.446961094427288,0.872338524100369,2.53299878168311,1.26343974685366,3.91778442299758,0,0,0,0.263766978228454,0.990130823680373,1.98838425436749,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0.164201178899891,0,0,0,0,1.83884244895785,0.30120591877825,0,0,0,0,0,0.802177789880567,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9506465517075,3.93010762749165,2.05601498999509,0,1.30368906653436,1.89379122293893,0,0,0,0.221533894583621,0,0,0.260118695119756,0.164437904603676,0.552700035571697,1.44901542867526,1.18629250529648,0.802622484269139,0,0.453237370790265,0.383220493601921,1.03088233644789,0.253019692019503,0.318565414324097,0,0,0.451725357233318,0.511946444617674,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.434473211648397,0,0,0,6.14446559053763,2.50668955317945,10.718642403101,0,6.8128881842369,0,0,0.263504357079378,0.261958150995425,2.5500670180478,1.48313777113772,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0.735326160691737,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0.560677600142307,0,0,0,0,0.326923806226917,0.151357427644931,0,0.70296429550139,0.624320153660641,0,0.448346041655403,0.939475989150119,0.647491777472526,0.702254033511242,1.63323337003915,3.80786383666481,1.13658359293342,13.0680314301026,7.17074094907815,0,0,3.19838616512726,2.50237039743928,0.831192346452549,2.19488810440419,3.37136575378922,23.1366610716159,0.113432183160021,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0.80823028409406,0,0.10075209822764,0.169560592310488,3.28543450377605,1.36373060295417,4.87567812161307,0.975789649036763,0.397589304964456,0.464775771478074,0.725627385107593,1.26160425437814,1.09493207722749,1.56449532329816,0,0,2.78620756819187,9.38443326170461,1.18306800039844,0,1.44606617930089,0.772057809126758,0.871517776369625,1.66089433377768,0.808987848960987,0.784885860501384,1.15424147083917,0.738155454624648,1.40241773803446,0,0,1.26755034821831,0,0,3.97316789473185,0.122988438543114,0,2.74375713521564,2.24803506515239,4.62433273093502,0.925884451585296,0.651616610620649,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0.148631162288728,1.87467667973554,0.335964256397719,1.55952606966625,0.626909658919938,0.290633938513962,3.4504441124869,0,0.088048434013226,0,0,0.25248486685276,3.87337155182231,1.52795370223311,2.34434894420094,0,0.411309970813294,0,0.857479297891735,0.336393253036082,0.43596006883328,0.80672114403045,0.129271715757778,0,1.690605505112,0,0,1.02882949704857,5.67396528093113,1.0656887160644,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0.723906533337896,1.02738161275192,0.179060963239896,0,0.197030760201927,1.2937654491571,0.898401253958239,0,0,0,0,0,0,0,0,2.69921281782108,2.50085260529839,1.62759014219841,0,0,0,0.585707074963566,1.50473049863859,0,1.03473071292505,1.99267679560631,1.47495334833363,1.04260337361699,0.587403472388222,0.686286847621712,1.6541442089831,0,0.640365346820666,0,0,0.907170879989041,0,0,0,0,0,0.321707842287215,0,0.308419387605311,1.06537035187876,0.574890092096664,0,2.67283870457906,0.120859449591622,0.200506470303285,0.276242966807689,0.114814448164607,0,0,0.902399225814824,0.231046011313244,0,1.46139224653261,0.422206515571503,0,1.02056223165909,0.431831832204279,0,2.70946437543853,3.01013864312912,0.254876273045038,0,1.11937377361089,0,0,0,0,0,2.7821073144885,2.56394501491362,1.81520899825294,1.14853107599234,1.30012049207304,0,0.580024309752732,0.924291702687866,0.307007349452259,0.137836572484531,0,0,1.10794615640931,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.95460974377781,0.78494864019923,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0.354761064070598,18.3663642708968,20.4162833635139,1.51789269506286,1.04980416073495,0.192444225451024,0,0,2.7301702225266,0,0,0,0.229723400206959,0.507447609232169,0.764637207142375,0,0,0.411362273086194,0.648473311192717,0,0,0.213648142254946,0,0,0,12.2628831029978,0.995985806877798,1.11598390910176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,1.23087398947712,0.270455678475983,0,0,0,2.78365540616599,0,0,6.5351313765475,0,0.890894042497916,0,0,0.422008249231538,21.9278148895125,0,0,2.39097585901284,0.276283915531148,0,0.20453736500431,0,0,0.718946809178615,0,0.511572370226872,2.07151151837561,2.3948309234694,2.22273980289274,0,0.0927680981618513,0,0,0,9.42499448065232,2.61724931056649,0,0,0,0,0,0,0.361789315876224,0,0.221158519862449,0.591095237907095,0.438770794307945,0.544692317594951,0.139423744278603,1.53900517007594,0.113942055847001,0,0.359030577639089,0,0,2.28993983504656,0,0,2.35470384592537,0,0,0,0,0,0,0,0,0.282706142867882,0,0,1.14994833854341,0.611030144933625,0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| |phase1_expression=4.72363786103447,2.14100523890983,0.704772020479856,3.00219895059391,0.446961094427288,0.872338524100369,2.53299878168311,1.26343974685366,3.91778442299758,0,0,0,0.263766978228454,0.990130823680373,1.98838425436749,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0.164201178899891,0,0,0,0,1.83884244895785,0.30120591877825,0,0,0,0,0,0.802177789880567,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9506465517075,3.93010762749165,2.05601498999509,0,1.30368906653436,1.89379122293893,0,0,0,0.221533894583621,0,0,0.260118695119756,0.164437904603676,0.552700035571697,1.44901542867526,1.18629250529648,0.802622484269139,0,0.453237370790265,0.383220493601921,1.03088233644789,0.253019692019503,0.318565414324097,0,0,0.451725357233318,0.511946444617674,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.434473211648397,0,0,0,6.14446559053763,2.50668955317945,10.718642403101,0,6.8128881842369,0,0,0.263504357079378,0.261958150995425,2.5500670180478,1.48313777113772,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0.735326160691737,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0.560677600142307,0,0,0,0,0.326923806226917,0.151357427644931,0,0.70296429550139,0.624320153660641,0,0.448346041655403,0.939475989150119,0.647491777472526,0.702254033511242,1.63323337003915,3.80786383666481,1.13658359293342,13.0680314301026,7.17074094907815,0,0,3.19838616512726,2.50237039743928,0.831192346452549,2.19488810440419,3.37136575378922,23.1366610716159,0.113432183160021,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0.80823028409406,0,0.10075209822764,0.169560592310488,3.28543450377605,1.36373060295417,4.87567812161307,0.975789649036763,0.397589304964456,0.464775771478074,0.725627385107593,1.26160425437814,1.09493207722749,1.56449532329816,0,0,2.78620756819187,9.38443326170461,1.18306800039844,0,1.44606617930089,0.772057809126758,0.871517776369625,1.66089433377768,0.808987848960987,0.784885860501384,1.15424147083917,0.738155454624648,1.40241773803446,0,0,1.26755034821831,0,0,3.97316789473185,0.122988438543114,0,2.74375713521564,2.24803506515239,4.62433273093502,0.925884451585296,0.651616610620649,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0.148631162288728,1.87467667973554,0.335964256397719,1.55952606966625,0.626909658919938,0.290633938513962,3.4504441124869,0,0.088048434013226,0,0,0.25248486685276,3.87337155182231,1.52795370223311,2.34434894420094,0,0.411309970813294,0,0.857479297891735,0.336393253036082,0.43596006883328,0.80672114403045,0.129271715757778,0,1.690605505112,0,0,1.02882949704857,5.67396528093113,1.0656887160644,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0.723906533337896,1.02738161275192,0.179060963239896,0,0.197030760201927,1.2937654491571,0.898401253958239,0,0,0,0,0,0,0,0,2.69921281782108,2.50085260529839,1.62759014219841,0,0,0,0.585707074963566,1.50473049863859,0,1.03473071292505,1.99267679560631,1.47495334833363,1.04260337361699,0.587403472388222,0.686286847621712,1.6541442089831,0,0.640365346820666,0,0,0.907170879989041,0,0,0,0,0,0.321707842287215,0,0.308419387605311,1.06537035187876,0.574890092096664,0,2.67283870457906,0.120859449591622,0.200506470303285,0.276242966807689,0.114814448164607,0,0,0.902399225814824,0.231046011313244,0,1.46139224653261,0.422206515571503,0,1.02056223165909,0.431831832204279,0,2.70946437543853,3.01013864312912,0.254876273045038,0,1.11937377361089,0,0,0,0,0,2.7821073144885,2.56394501491362,1.81520899825294,1.14853107599234,1.30012049207304,0,0.580024309752732,0.924291702687866,0.307007349452259,0.137836572484531,0,0,1.10794615640931,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.95460974377781,0.78494864019923,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0.354761064070598,18.3663642708968,20.4162833635139,1.51789269506286,1.04980416073495,0.192444225451024,0,0,2.7301702225266,0,0,0,0.229723400206959,0.507447609232169,0.764637207142375,0,0,0.411362273086194,0.648473311192717,0,0,0.213648142254946,0,0,0,12.2628831029978,0.995985806877798,1.11598390910176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,1.23087398947712,0.270455678475983,0,0,0,2.78365540616599,0,0,6.5351313765475,0,0.890894042497916,0,0,0.422008249231538,21.9278148895125,0,0,2.39097585901284,0.276283915531148,0,0.20453736500431,0,0,0.718946809178615,0,0.511572370226872,2.07151151837561,2.3948309234694,2.22273980289274,0,0.0927680981618513,0,0,0,9.42499448065232,2.61724931056649,0,0,0,0,0,0,0.361789315876224,0,0.221158519862449,0.591095237907095,0.438770794307945,0.544692317594951,0.139423744278603,1.53900517007594,0.113942055847001,0,0.359030577639089,0,0,2.28993983504656,0,0,2.35470384592537,0,0,0,0,0,0,0,0,0.282706142867882,0,0,1.14994833854341,0.611030144933625,0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| ||
|short_description=p1@ISM1 | |||
}} | }} |
Latest revision as of 04:37, 20 September 2015
Short description: | p1@ISM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ISM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -460bp_to_ENST00000262487, NM_080826, uc010gce.1_5end |
EntrezGene: | ISM1 |
HGNC: | 16213 |
UniProt: | B1AKI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 2.37e-08 | 14 |
GAG secreting cell | 1.04e-07 | 9 |
carbohydrate secreting cell | 1.04e-07 | 9 |
mesenchymal stem cell of the bone marrow | 3.61e-07 | 6 |
osteoblast | 7.06e-07 | 11 |
osteoprogenitor cell | 7.06e-07 | 11 |
mesenchyme condensation cell | 7.06e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
mouth | 4.68e-10 | 29 |
stomodeum | 4.68e-10 | 29 |
gingiva | 1.44e-09 | 8 |
surface structure | 2.62e-08 | 99 |
articulation | 8.46e-08 | 8 |
skeletal joint | 8.46e-08 | 8 |
articular system | 8.46e-08 | 8 |
digestive system | 9.29e-08 | 145 |
digestive tract | 9.29e-08 | 145 |
primitive gut | 9.29e-08 | 145 |
subdivision of skeletal system | 2.08e-07 | 16 |
axial skeletal system | 2.59e-07 | 14 |
oral opening | 6.13e-07 | 22 |