FFCP PHASE1:Hg19::chr21:46767506..46767521,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C41|description=CAGE_peak_at_chr21:46767506..46767521,+|id=chr21:46767506..46767521,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000214;8.96e-09;3|ontology_enrichment_celltype_v019_2=CL:0000214,8.96e-09,3|ontology_enrichment_development_v019=UBERON:0006965;2.90e-12;2!UBERON:0003056;8.31e-09;3!UBERON:0009847;1.00e-08;3!UBERON:0003353;1.00e-08;3|ontology_enrichment_disease=DOID:3307!4.87e-07!2|ontology_enrichment_disease_v019=DOID:3307;2.90e-12;2|ontology_enrichment_disease_v019_2=DOID:3307,2.59e-12,2|ontology_enrichment_uberon=UBERON:0007023!1.75e-31!115;UBERON:0001049!5.16e-10!57;UBERON:0005068!5.16e-10!57;UBERON:0006241!5.16e-10!57;UBERON:0007135!5.16e-10!57;UBERON:0002020!2.01e-09!34;UBERON:0003528!2.01e-09!34;UBERON:0003075!6.14e-09!86;UBERON:0007284!6.14e-09!86;UBERON:0003101!6.52e-09!22;UBERON:0000079!6.52e-09!22;UBERON:0001896!7.66e-09!3;UBERON:0005290!7.66e-09!3;UBERON:0010096!7.66e-09!3;UBERON:0004111!9.20e-09!241;UBERON:0005743!1.04e-08!86;UBERON:0001869!1.33e-08!32;UBERON:0000073!2.12e-08!94;UBERON:0001016!2.12e-08!94;UBERON:0002346!2.56e-08!90;UBERON:0002791!2.82e-08!33;UBERON:0001017!2.94e-08!82;UBERON:0000477!3.88e-08!286;UBERON:0001893!5.73e-08!34;UBERON:0002619!2.05e-07!22;UBERON:0000955!2.18e-07!69;UBERON:0006238!2.18e-07!69;UBERON:0002616!3.43e-07!59|ontology_enrichment_uberon_v019=UBERON:0001255;2.90e-12;2!UBERON:0001556;2.90e-12;2!UBERON:0006915;8.96e-09;3!UBERON:0007616;8.96e-09;3!UBERON:0002217;8.96e-09;3!UBERON:0002018;8.96e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0001255,2.90e-12,2;UBERON:0001556,2.90e-12,2;UBERON:0006915,8.96e-09,3;UBERON:0007616,8.96e-09,3;UBERON:0002217,8.96e-09,3;UBERON:0002018,8.96e-09,3;UBERON:0000162,3.04e-07,14;UBERON:0001353,3.04e-07,14;UBERON:0000163,3.04e-07,14;UBERON:0006866,3.04e-07,14;UBERON:0000164,3.04e-07,14;UBERON:0000931,3.04e-07,14;UBERON:0004122,8.09e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.805658634218294,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.229628896329213,0,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.707027159768564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9924798825107,0,0,0,0,0,0,0,0,1.87422470710174,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,2.93774963014692,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0.916641696046735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72519698234691,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0.82731361184183,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,2.19780659981439,0.157115589916002,0,0,0,0,8.50570875702211,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,1.22574160876953,0,0,0.297046400327086,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0,0,3.47097436825006,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.803892390468535,0,0,0,0,0,0,0,0,0.202117188958219,0,0.342233301085281,0.0673520530145875,0,0.332660356546013,0,0,1.9307228228694,0,0,0,0.406896178315738,0,0.201273793591026,0|short_description=p@chr21:46767506..46767521,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_at_chr21:46767506..46767521,+ | |||
|id=chr21:46767506..46767521,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000214;8.96e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,8.96e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.90e-12;2!UBERON:0003056;8.31e-09;3!UBERON:0009847;1.00e-08;3!UBERON:0003353;1.00e-08;3 | |||
|ontology_enrichment_disease=DOID:3307!4.87e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3307;2.90e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,2.59e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.75e-31!115;UBERON:0001049!5.16e-10!57;UBERON:0005068!5.16e-10!57;UBERON:0006241!5.16e-10!57;UBERON:0007135!5.16e-10!57;UBERON:0002020!2.01e-09!34;UBERON:0003528!2.01e-09!34;UBERON:0003075!6.14e-09!86;UBERON:0007284!6.14e-09!86;UBERON:0003101!6.52e-09!22;UBERON:0000079!6.52e-09!22;UBERON:0001896!7.66e-09!3;UBERON:0005290!7.66e-09!3;UBERON:0010096!7.66e-09!3;UBERON:0004111!9.20e-09!241;UBERON:0005743!1.04e-08!86;UBERON:0001869!1.33e-08!32;UBERON:0000073!2.12e-08!94;UBERON:0001016!2.12e-08!94;UBERON:0002346!2.56e-08!90;UBERON:0002791!2.82e-08!33;UBERON:0001017!2.94e-08!82;UBERON:0000477!3.88e-08!286;UBERON:0001893!5.73e-08!34;UBERON:0002619!2.05e-07!22;UBERON:0000955!2.18e-07!69;UBERON:0006238!2.18e-07!69;UBERON:0002616!3.43e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001255;2.90e-12;2!UBERON:0001556;2.90e-12;2!UBERON:0006915;8.96e-09;3!UBERON:0007616;8.96e-09;3!UBERON:0002217;8.96e-09;3!UBERON:0002018;8.96e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001255,2.90e-12,2;UBERON:0001556,2.90e-12,2;UBERON:0006915,8.96e-09,3;UBERON:0007616,8.96e-09,3;UBERON:0002217,8.96e-09,3;UBERON:0002018,8.96e-09,3;UBERON:0000162,3.04e-07,14;UBERON:0001353,3.04e-07,14;UBERON:0000163,3.04e-07,14;UBERON:0006866,3.04e-07,14;UBERON:0000164,3.04e-07,14;UBERON:0000931,3.04e-07,14;UBERON:0004122,8.09e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.805658634218294,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.229628896329213,0,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.707027159768564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9924798825107,0,0,0,0,0,0,0,0,1.87422470710174,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,2.93774963014692,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0.916641696046735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72519698234691,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0.82731361184183,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,2.19780659981439,0.157115589916002,0,0,0,0,8.50570875702211,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,1.22574160876953,0,0,0.297046400327086,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0,0,3.47097436825006,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.803892390468535,0,0,0,0,0,0,0,0,0.202117188958219,0,0.342233301085281,0.0673520530145875,0,0.332660356546013,0,0,1.9307228228694,0,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p@chr21:46767506..46767521,+ | |||
}} |
Revision as of 10:44, 12 September 2013
Short description: | p@chr21:46767506..46767521, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:46767506..46767521, + |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 8.96e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
urinary bladder | 2.90e-12 | 2 |
lower urinary tract | 2.90e-12 | 2 |
stratified squamous epithelium | 8.96e-09 | 3 |
layer of synovial tissue | 8.96e-09 | 3 |
synovial joint | 8.96e-09 | 3 |
synovial membrane of synovial joint | 8.96e-09 | 3 |
cloaca | 3.04e-07 | 14 |
anal region | 3.04e-07 | 14 |
embryonic cloaca | 3.04e-07 | 14 |
terminal part of digestive tract | 3.04e-07 | 14 |
primitive urogenital sinus | 3.04e-07 | 14 |
proctodeum | 3.04e-07 | 14 |
genitourinary system | 8.09e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
teratoma | 2.59e-12 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.