FFCP PHASE1:Hg19::chr2:200322990..200323013,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-317bp_to_uc010fsr.1_5end | |association_with_transcript=-317bp_to_uc010fsr.1_5end | ||
|cluster_id=chr2:200322990..200323013,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_uc010fsr.1_5end | |description=CAGE_peak_2_at_uc010fsr.1_5end | ||
|id=chr2:200322990..200323013,+ | |id=chr2:200322990..200323013,+ | ||
|ontology_enrichment_celltype=CL:0002556!1.04e-07!6;CL:0002319!3.01e-07!25;CL:0000055!3.81e-07!180 | |ontology_enrichment_celltype=CL:0002556!1.04e-07!6;CL:0002319!3.01e-07!25;CL:0000055!3.81e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.05e-11;6!CL:0000404;1.05e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.55e-15,8;CL:0000540,8.77e-12,6;CL:0000031,8.77e-12,6;CL:0000404,8.77e-12,6;CL:0002552,9.98e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000031;1.05e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!8.00e-09!22;UBERON:0004121!2.33e-08!169;UBERON:0000956!3.32e-08!25;UBERON:0000203!3.32e-08!25;UBERON:0000924!3.35e-08!173;UBERON:0006601!3.35e-08!173;UBERON:0001869!4.10e-08!32;UBERON:0000467!8.63e-08!625;UBERON:0000480!1.04e-07!626;UBERON:0001758!1.04e-07!6;UBERON:0003672!1.04e-07!6;UBERON:0000468!1.04e-07!659;UBERON:0000475!2.05e-07!365;UBERON:0001893!2.48e-07!34;UBERON:0001950!3.49e-07!20;UBERON:0000073!5.67e-07!94;UBERON:0001016!5.67e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.01e-07;22!UBERON:0000956;8.34e-07;25!UBERON:0000203;8.34e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.72e-09,81;UBERON:0002619,9.78e-08,22;UBERON:0001016,1.07e-07,89;UBERON:0004121,1.49e-07,171;UBERON:0000924,1.49e-07,171;UBERON:0006601,1.49e-07,171;UBERON:0000956,8.14e-07,25;UBERON:0000203,8.14e-07,25 | |||
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| ||
|short_description=p2@uc010fsr.1 | |short_description=p2@uc010fsr.1 | ||
}} | }} |
Latest revision as of 04:47, 29 July 2015
Short description: | p2@uc010fsr.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc010fsr.1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -317bp_to_uc010fsr.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.55e-15 | 8 |
neuron | 8.77e-12 | 6 |
neuroblast | 8.77e-12 | 6 |
electrically signaling cell | 8.77e-12 | 6 |
fibroblast of gingiva | 9.98e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.72e-09 | 81 |
regional part of cerebral cortex | 9.78e-08 | 22 |
nervous system | 1.07e-07 | 89 |
ectoderm-derived structure | 1.49e-07 | 171 |
ectoderm | 1.49e-07 | 171 |
presumptive ectoderm | 1.49e-07 | 171 |
cerebral cortex | 8.14e-07 | 25 |
pallium | 8.14e-07 | 25 |