FFCP PHASE1:Hg19::chr3:27526217..27526231,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:27526217..27526231,+ | |||
|description=CAGE_peak_at_chr3:27526217..27526231,+ | |description=CAGE_peak_at_chr3:27526217..27526231,+ | ||
|id=chr3:27526217..27526231,+ | |id=chr3:27526217..27526231,+ | ||
|ontology_enrichment_celltype=CL:0002087!4.16e-09!119;CL:0000860!8.03e-09!45;CL:0000738!1.13e-08!140;CL:0002057!1.02e-07!42;CL:0002031!1.47e-07!124;CL:0000988!6.89e-07!182 | |ontology_enrichment_celltype=CL:0002087!4.16e-09!119;CL:0000860!8.03e-09!45;CL:0000738!1.13e-08!140;CL:0002057!1.02e-07!42;CL:0002031!1.47e-07!124;CL:0000988!6.89e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000623;5.56e-12;3!CL:0000306;3.29e-09;4!CL:0002222;3.29e-09;4!CL:0002224;3.29e-09;4!CL:0002539;3.25e-08;10!CL:0000071;1.28e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,5.28e-12,3;CL:0000825,5.28e-12,3;CL:0000306,3.58e-09,4;CL:0002222,3.58e-09,4;CL:0002224,3.58e-09,4;CL:0002539,2.92e-08,10;CL:0000071,1.25e-07,18;CL:0002546,1.25e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;1.28e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.87e-09;4!DOID:1612;1.87e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.43e-09,4;DOID:1612,1.43e-09,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000490;3.18e-11;33!UBERON:0010077;3.29e-09;4!UBERON:0005389;3.29e-09;4!UBERON:0000484;3.29e-09;4!UBERON:0000965;3.29e-09;4!UBERON:0001803;3.29e-09;4!UBERON:0004237;3.25e-08;10!UBERON:0004695;3.25e-08;10!UBERON:0002111;3.25e-08;10!UBERON:0004178;3.25e-08;10!UBERON:0004638;1.28e-07;18!UBERON:0001986;1.28e-07;18!UBERON:0004852;1.28e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,3.58e-09,4;UBERON:0005389,3.58e-09,4;UBERON:0000484,3.58e-09,4;UBERON:0002546,3.58e-09,4;UBERON:0000965,3.58e-09,4;UBERON:0001803,3.58e-09,4;UBERON:0003073,3.58e-09,4;UBERON:0005426,3.58e-09,4;UBERON:0004237,2.92e-08,10;UBERON:0004695,2.92e-08,10;UBERON:0002111,2.92e-08,10;UBERON:0004178,2.92e-08,10;UBERON:0004638,1.25e-07,18;UBERON:0001986,1.25e-07,18;UBERON:0004852,1.25e-07,18 | |||
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| ||
|short_description=p@chr3:27526217..27526231,+ | |short_description=p@chr3:27526217..27526231,+ | ||
}} | }} |
Latest revision as of 20:17, 29 July 2015
Short description: | p@chr3:27526217..27526231, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:27526217..27526231, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 5.28e-12 | 3 |
pro-NK cell | 5.28e-12 | 3 |
crystallin accumulating cell | 3.58e-09 | 4 |
vertebrate lens cell | 3.58e-09 | 4 |
lens epithelial cell | 3.58e-09 | 4 |
aortic smooth muscle cell | 2.92e-08 | 10 |
blood vessel endothelial cell | 1.25e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.25e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 3.58e-09 | 4 |
transparent eye structure | 3.58e-09 | 4 |
simple cuboidal epithelium | 3.58e-09 | 4 |
cranial placode | 3.58e-09 | 4 |
lens of camera-type eye | 3.58e-09 | 4 |
epithelium of lens | 3.58e-09 | 4 |
lens placode | 3.58e-09 | 4 |
lens vesicle | 3.58e-09 | 4 |
blood vessel smooth muscle | 2.92e-08 | 10 |
arterial system smooth muscle | 2.92e-08 | 10 |
artery smooth muscle tissue | 2.92e-08 | 10 |
aorta smooth muscle tissue | 2.92e-08 | 10 |
blood vessel endothelium | 1.25e-07 | 18 |
endothelium | 1.25e-07 | 18 |
cardiovascular system endothelium | 1.25e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.43e-09 | 4 |
breast cancer | 1.43e-09 | 4 |