FFCP PHASE1:Hg19::chr6:133135704..133135711,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6206 | |EntrezGene=6206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10385 | |HGNC=10385 | ||
|TSSclassifier=strong | |||
|UniProt=P25398 | |UniProt=P25398 | ||
|association_with_transcript=0bp_to_ENST00000484616,NM_001016,uc003qdx.2_5end | |association_with_transcript=0bp_to_ENST00000484616,NM_001016,uc003qdx.2_5end | ||
|cluster_id=chr6:133135704..133135711,+ | |||
|coexpression_cluster_id=C527 | |coexpression_cluster_id=C527 | ||
|description=CAGE_peak_1_at_RPS12_5end | |description=CAGE_peak_1_at_RPS12_5end | ||
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|ontology_enrichment_celltype=CL:0000838!1.23e-15!52;CL:0000542!5.16e-15!53;CL:0000051!5.16e-15!53;CL:0000003!1.18e-13!722;CL:0000791!6.90e-12!18;CL:0000789!6.90e-12!18;CL:0002420!6.90e-12!18;CL:0002419!6.90e-12!18;CL:0000790!6.90e-12!18;CL:0000084!1.63e-10!25;CL:0000827!1.63e-10!25;CL:0000012!3.82e-09!682;CL:0000144!1.29e-08!625;CL:0000548!4.38e-08!679;CL:0000004!4.38e-08!679;CL:0000255!4.38e-08!679;CL:0000625!4.90e-08!11;CL:0002371!8.72e-08!591;CL:0000236!1.59e-07!14;CL:0002087!8.58e-07!119 | |ontology_enrichment_celltype=CL:0000838!1.23e-15!52;CL:0000542!5.16e-15!53;CL:0000051!5.16e-15!53;CL:0000003!1.18e-13!722;CL:0000791!6.90e-12!18;CL:0000789!6.90e-12!18;CL:0002420!6.90e-12!18;CL:0002419!6.90e-12!18;CL:0000790!6.90e-12!18;CL:0000084!1.63e-10!25;CL:0000827!1.63e-10!25;CL:0000012!3.82e-09!682;CL:0000144!1.29e-08!625;CL:0000548!4.38e-08!679;CL:0000004!4.38e-08!679;CL:0000255!4.38e-08!679;CL:0000625!4.90e-08!11;CL:0002371!8.72e-08!591;CL:0000236!1.59e-07!14;CL:0002087!8.58e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.92e-12;18!CL:0000789;6.92e-12;18!CL:0002419;6.92e-12;18!CL:0000084;1.66e-10;25!CL:0000542;6.57e-10;53!CL:0000625;4.90e-08;11!CL:0000236;8.68e-08;13 | |ontology_enrichment_celltype_v019=CL:0000791;6.92e-12;18!CL:0000789;6.92e-12;18!CL:0002419;6.92e-12;18!CL:0000084;1.66e-10;25!CL:0000542;6.57e-10;53!CL:0000625;4.90e-08;11!CL:0000236;8.68e-08;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.23e-15,52;CL:0000542,5.16e-15,53;CL:0000051,5.16e-15,53;CL:0000791,6.90e-12,18;CL:0000789,6.90e-12,18;CL:0002420,6.90e-12,18;CL:0002419,6.90e-12,18;CL:0000790,6.90e-12,18;CL:0000084,1.63e-10,25;CL:0000827,1.63e-10,25;CL:0000625,4.90e-08,11;CL:0002087,1.48e-07,115;CL:0000236,1.59e-07,14;CL:0002031,9.16e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;6.92e-12;18!CL:0000051;6.57e-10;53 | |ontology_enrichment_development_v019=CL:0000790;6.92e-12;18!CL:0000051;6.57e-10;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@RPS12 | |short_description=p1@RPS12 | ||
}} | }} |
Latest revision as of 20:26, 24 September 2015
Short description: | p1@RPS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPS12_5end |
Coexpression cluster: | C527_CD4_CD8_CD19_CD34_CD133_skeletal_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000484616, NM_001016, uc003qdx.2_5end |
EntrezGene: | RPS12 |
HGNC: | 10385 |
UniProt: | P25398 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.23e-15 | 52 |
lymphocyte | 5.16e-15 | 53 |
common lymphoid progenitor | 5.16e-15 | 53 |
mature alpha-beta T cell | 6.90e-12 | 18 |
alpha-beta T cell | 6.90e-12 | 18 |
immature T cell | 6.90e-12 | 18 |
mature T cell | 6.90e-12 | 18 |
immature alpha-beta T cell | 6.90e-12 | 18 |
T cell | 1.63e-10 | 25 |
pro-T cell | 1.63e-10 | 25 |
CD8-positive, alpha-beta T cell | 4.90e-08 | 11 |
nongranular leukocyte | 1.48e-07 | 115 |
B cell | 1.59e-07 | 14 |
hematopoietic lineage restricted progenitor cell | 9.16e-07 | 120 |