FFCP PHASE1:Hg19::chr8:128231737..128231742,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-404bp_to_ENST00000500112,uc003ysa.1_5end | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_14_at_ENST00000500112_5end,CAGE_peak_14_at_uc003ysa.1_5end | |||
|id=chr8:128231737..128231742,- | |||
|ontology_enrichment_celltype=CL:0002150!6.66e-21!3;CL:0000861!6.66e-21!3;CL:0000083!1.45e-15!4;CL:0000066!1.57e-14!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.15e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.61e-39;29!UBERON:0008814;2.57e-08;2!UBERON:0010056;2.57e-08;2!UBERON:0006595;6.36e-07;86 | |||
|ontology_enrichment_disease=DOID:305!3.28e-32!106;DOID:0050687!1.03e-22!143;DOID:1793!1.45e-15!4;DOID:4074!2.36e-14!2;DOID:4905!2.36e-14!2;DOID:3498!2.36e-14!2;DOID:162!2.99e-13!235;DOID:14566!7.07e-13!239;DOID:1749!1.05e-11!14;DOID:170!1.48e-10!6 | |||
|ontology_enrichment_disease_v019=DOID:4074;2.57e-08;2!DOID:4905;2.57e-08;2!DOID:3498;2.57e-08;2!DOID:305;5.48e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.35e-25,106;DOID:0050687,3.71e-18,143;DOID:162,1.82e-10,235;DOID:14566,3.21e-10,239;DOID:4074,2.48e-08,2;DOID:4905,2.48e-08,2;DOID:3498,2.48e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.65e-61!9;UBERON:0001557!5.83e-42!19;UBERON:0000072!1.44e-22!46;UBERON:0000065!1.96e-22!53;UBERON:0008947!6.13e-20!38;UBERON:0003258!6.13e-20!38;UBERON:0001041!9.01e-19!98;UBERON:0000077!8.75e-17!130;UBERON:0004921!8.75e-17!129;UBERON:0004185!8.75e-17!129;UBERON:0001004!8.67e-16!72;UBERON:0004119!2.35e-13!169;UBERON:0000925!2.35e-13!169;UBERON:0006595!2.35e-13!169;UBERON:0001007!2.52e-13!155;UBERON:0001555!2.52e-13!155;UBERON:0007026!2.52e-13!155;UBERON:0000063!9.55e-13!97;UBERON:0002372!1.21e-07!1;UBERON:0001961!1.21e-07!1;UBERON:0001744!1.21e-07!1;UBERON:0001735!1.21e-07!1;UBERON:0001052!1.94e-07!4;UBERON:0003104!2.25e-07!238;UBERON:0009142!2.25e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.34e-126;9!UBERON:0001557;1.34e-126;9!UBERON:0000072;3.20e-28;37!UBERON:0000065;7.89e-24;44!UBERON:0001004;3.73e-15;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.25e-127,9;UBERON:0001557,1.20e-73,19;UBERON:0008947,1.27e-29,38;UBERON:0003258,1.27e-29,38;UBERON:0000072,2.63e-29,47;UBERON:0000065,2.15e-25,54;UBERON:0001004,2.81e-18,74;UBERON:0001041,2.13e-15,87;UBERON:0004921,5.63e-11,118;UBERON:0001007,9.65e-09,145;UBERON:0001555,9.65e-09,145;UBERON:0007026,9.65e-09,145;UBERON:0004119,8.04e-08,160;UBERON:0000925,8.04e-08,160;UBERON:0006595,8.04e-08,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25904480143438,1.68584690078102,2.6511213287183,3.86028904563379,2.39667388501647,2.84724742933316,2.15730093056263,2.5508790466295,1.92373578473195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988551862620595,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,1.21390189767046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06431964417994,1.16942907337897,0.492692742319255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03973099535304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,2.11736923029415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p14@ENST00000500112,p14@uc003ysa.1 | |||
}} |
Revision as of 23:45, 22 January 2014
Short description: | p14@ENST00000500112, p14@uc003ysa.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_ENST00000500112_5end, CAGE_peak_14_at_uc003ysa.1_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | -404bp_to_ENST00000500112, uc003ysa.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.15e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.25e-127 | 9 |
upper respiratory tract | 1.20e-73 | 19 |
respiratory primordium | 1.27e-29 | 38 |
endoderm of foregut | 1.27e-29 | 38 |
segment of respiratory tract | 2.63e-29 | 47 |
respiratory tract | 2.15e-25 | 54 |
respiratory system | 2.81e-18 | 74 |
foregut | 2.13e-15 | 87 |
subdivision of digestive tract | 5.63e-11 | 118 |
digestive system | 9.65e-09 | 145 |
digestive tract | 9.65e-09 | 145 |
primitive gut | 9.65e-09 | 145 |
endoderm-derived structure | 8.04e-08 | 160 |
endoderm | 8.04e-08 | 160 |
presumptive endoderm | 8.04e-08 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.35e-25 | 106 |
cell type cancer | 3.71e-18 | 143 |
cancer | 1.82e-10 | 235 |
disease of cellular proliferation | 3.21e-10 | 239 |
pancreas adenocarcinoma | 2.48e-08 | 2 |
pancreatic carcinoma | 2.48e-08 | 2 |
pancreatic ductal adenocarcinoma | 2.48e-08 | 2 |