FFCP PHASE1:Hg19::chrX:19692351..19692356,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:19692351..19692356,- | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chrX:19692351..19692356,- | |description=CAGE_peak_at_chrX:19692351..19692356,- | ||
|id=chrX:19692351..19692356,- | |id=chrX:19692351..19692356,- | ||
|ontology_enrichment_celltype=CL:0000066!1.11e-23!254;CL:0002076!8.74e-23!43;CL:0002368!2.74e-19!13;CL:0000223!3.97e-17!59;CL:0000076!9.41e-15!62;CL:0002621!1.29e-11!3;CL:0002251!6.86e-11!21;CL:0000322!1.13e-10!3;CL:0002202!5.44e-09!9;CL:0002632!5.44e-09!9;CL:0000220!1.78e-08!246;CL:0002321!2.42e-08!248;CL:0000077!3.03e-08!19;CL:0000063!5.43e-07!578 | |ontology_enrichment_celltype=CL:0000066!1.11e-23!254;CL:0002076!8.74e-23!43;CL:0002368!2.74e-19!13;CL:0000223!3.97e-17!59;CL:0000076!9.41e-15!62;CL:0002621!1.29e-11!3;CL:0002251!6.86e-11!21;CL:0000322!1.13e-10!3;CL:0002202!5.44e-09!9;CL:0002632!5.44e-09!9;CL:0000220!1.78e-08!246;CL:0002321!2.42e-08!248;CL:0000077!3.03e-08!19;CL:0000063!5.43e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0002621;4.37e-40;3!CL:0000077;1.63e-17;19!CL:0002097;5.19e-08;2!CL:0002076;2.62e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,4.38e-40,3;CL:0000077,1.45e-17,19;CL:0000076,6.85e-10,63;CL:0000066,9.71e-09,253;CL:0002097,5.37e-08,2;CL:0002076,7.43e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.08e-13!14;DOID:305!1.90e-11!106;DOID:0050687!9.14e-09!143;DOID:3910!2.02e-07!2 | |ontology_enrichment_disease=DOID:1749!1.08e-13!14;DOID:305!1.90e-11!106;DOID:0050687!9.14e-09!143;DOID:3910!2.02e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:4929;7.27e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,7.03e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001949!1.29e-11!3;UBERON:0004821!1.13e-10!3;UBERON:0003215!1.13e-10!3;UBERON:0002299!1.13e-10!3;UBERON:0006524!1.13e-10!3;UBERON:0008874!1.13e-10!3;UBERON:0002169!1.13e-10!3;UBERON:0004894!1.13e-10!3;UBERON:0004119!9.84e-10!169;UBERON:0000925!9.84e-10!169;UBERON:0006595!9.84e-10!169;UBERON:0002394!2.75e-08!4;UBERON:0003928!2.75e-08!4;UBERON:0001004!5.07e-08!72;UBERON:0005911!1.43e-07!82;UBERON:0003343!1.56e-07!4;UBERON:0004785!1.56e-07!4;UBERON:0004903!2.02e-07!2;UBERON:0002173!2.02e-07!2;UBERON:0002186!2.02e-07!2;UBERON:0001007!7.80e-07!155;UBERON:0001555!7.80e-07!155;UBERON:0007026!7.80e-07!155 | |ontology_enrichment_uberon=UBERON:0001949!1.29e-11!3;UBERON:0004821!1.13e-10!3;UBERON:0003215!1.13e-10!3;UBERON:0002299!1.13e-10!3;UBERON:0006524!1.13e-10!3;UBERON:0008874!1.13e-10!3;UBERON:0002169!1.13e-10!3;UBERON:0004894!1.13e-10!3;UBERON:0004119!9.84e-10!169;UBERON:0000925!9.84e-10!169;UBERON:0006595!9.84e-10!169;UBERON:0002394!2.75e-08!4;UBERON:0003928!2.75e-08!4;UBERON:0001004!5.07e-08!72;UBERON:0005911!1.43e-07!82;UBERON:0003343!1.56e-07!4;UBERON:0004785!1.56e-07!4;UBERON:0004903!2.02e-07!2;UBERON:0002173!2.02e-07!2;UBERON:0002186!2.02e-07!2;UBERON:0001007!7.80e-07!155;UBERON:0001555!7.80e-07!155;UBERON:0007026!7.80e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.37e-40;3!UBERON:0003929;1.31e-17;7!UBERON:0003350;1.72e-15;8!UBERON:0001828;1.72e-15;8!UBERON:0004913;1.97e-14;1!UBERON:0003703;1.97e-14;1!UBERON:0001174;1.97e-14;1!UBERON:0004914;1.97e-14;1!UBERON:0002394;4.70e-14;4!UBERON:0003928;4.70e-14;4!UBERON:0000486;1.57e-10;12!UBERON:0004807;7.13e-10;22!UBERON:0003729;9.19e-10;13!UBERON:0002294;1.99e-08;7!UBERON:0001173;1.99e-08;7!UBERON:0010371;2.47e-07;31!UBERON:0000161;7.64e-07;19!UBERON:0000166;7.64e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.38e-40,3;UBERON:0003350,1.72e-15,8;UBERON:0001828,1.72e-15,8;UBERON:0004913,1.84e-14,1;UBERON:0003703,1.84e-14,1;UBERON:0001174,1.84e-14,1;UBERON:0004914,1.84e-14,1;UBERON:0003729,9.19e-10,13;UBERON:0002394,1.26e-09,6;UBERON:0003928,1.26e-09,6;UBERON:0004807,8.58e-08,28 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.656804715599566,0.550975469195755,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67195621010264,1.09098448236334,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,2.24803506515239,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.708875486211932,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,1.74306691720059,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96683796866347,0.192190067365106,0.382838137483752,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0.311039587661807,1.07842021376792,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0.293977192243133,0.34823682632161,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14441591374926,4.17590867144339,0,0,0,0,0.308801447160972,0,0,0,3.04096393175531,0,0,0,0,0.194860308839388,0,0,0,0,0.845248493434508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,1.47856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.236387681767936,0.111231401892069,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,103.045302540982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chrX:19692351..19692356,- | |short_description=p@chrX:19692351..19692356,- | ||
}} | }} |
Latest revision as of 07:23, 1 August 2015
Short description: | p@chrX:19692351..19692356, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:19692351..19692356, - |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 4.38e-40 | 3 |
mesothelial cell | 1.45e-17 | 19 |
squamous epithelial cell | 6.85e-10 | 63 |
epithelial cell | 9.71e-09 | 253 |
cortical cell of adrenal gland | 5.37e-08 | 2 |
endo-epithelial cell | 7.43e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.38e-40 | 3 |
epithelium of mucosa | 1.72e-15 | 8 |
gingiva | 1.72e-15 | 8 |
hepatopancreatic ampulla | 1.84e-14 | 1 |
extrahepatic bile duct | 1.84e-14 | 1 |
common bile duct | 1.84e-14 | 1 |
duodenal papilla | 1.84e-14 | 1 |
mouth mucosa | 9.19e-10 | 13 |
bile duct | 1.26e-09 | 6 |
digestive system duct | 1.26e-09 | 6 |
respiratory system epithelium | 8.58e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 7.03e-08 | 2 |