FFCP PHASE1:Mm9::chr12:36397620..36397624,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=48 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:36397620..36397624,+ | |||
|description=CAGE_peak_at_chr12:36397620..36397624,+ | |description=CAGE_peak_at_chr12:36397620..36397624,+ | ||
|id=chr12:36397620..36397624,+ | |id=chr12:36397620..36397624,+ | ||
|ontology_enrichment_celltype=CL:0000553!6.71e-16!6;CL:0000556!6.71e-16!6;CL:0002031!1.01e-14!25;CL:0000988!1.29e-12!32;CL:0002032!1.29e-12!32;CL:0000037!1.29e-12!32;CL:0000566!1.29e-12!32;CL:0000837!1.29e-12!32;CL:0000063!1.78e-12!66;CL:0000414!3.45e-11!11;CL:0000050!2.44e-10!9;CL:0000838!3.02e-09!12;CL:0002320!3.37e-09!46;CL:0000134!3.37e-09!46;CL:0000068!6.11e-09!3;CL:0002202!6.11e-09!3;CL:0000069!6.11e-09!3;CL:0002632!6.11e-09!3;CL:0002368!6.11e-09!3;CL:0000307!6.11e-09!3;CL:0000377!6.11e-09!3;CL:0000542!1.86e-08!13;CL:0000051!1.86e-08!13;CL:0002027!2.61e-08!3;CL:0002006!2.61e-08!3;CL:0002024!2.61e-08!3;CL:0000624!1.70e-07!8;CL:0000219!2.39e-07!54;CL:0000084!2.46e-07!11;CL:0000827!2.46e-07!11;CL:0000839!6.47e-07!13 | |ontology_enrichment_celltype=CL:0000553!6.71e-16!6;CL:0000556!6.71e-16!6;CL:0002031!1.01e-14!25;CL:0000988!1.29e-12!32;CL:0002032!1.29e-12!32;CL:0000037!1.29e-12!32;CL:0000566!1.29e-12!32;CL:0000837!1.29e-12!32;CL:0000063!1.78e-12!66;CL:0000414!3.45e-11!11;CL:0000050!2.44e-10!9;CL:0000838!3.02e-09!12;CL:0002320!3.37e-09!46;CL:0000134!3.37e-09!46;CL:0000068!6.11e-09!3;CL:0002202!6.11e-09!3;CL:0000069!6.11e-09!3;CL:0002632!6.11e-09!3;CL:0002368!6.11e-09!3;CL:0000307!6.11e-09!3;CL:0000377!6.11e-09!3;CL:0000542!1.86e-08!13;CL:0000051!1.86e-08!13;CL:0002027!2.61e-08!3;CL:0002006!2.61e-08!3;CL:0002024!2.61e-08!3;CL:0000624!1.70e-07!8;CL:0000219!2.39e-07!54;CL:0000084!2.46e-07!11;CL:0000827!2.46e-07!11;CL:0000839!6.47e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.83e-19,6;CL:0000556,1.83e-19,6;CL:0000068,2.82e-17,3;CL:0002202,2.82e-17,3;CL:0000069,2.82e-17,3;CL:0002632,2.82e-17,3;CL:0002368,2.82e-17,3;CL:0000307,2.82e-17,3;CL:0000377,2.82e-17,3;CL:0000945,3.62e-14,1;CL:0000236,3.62e-14,1;CL:0000826,3.62e-14,1;CL:0000050,3.07e-13,9;CL:0002031,6.45e-13,25;CL:0000988,3.68e-10,32;CL:0002032,3.68e-10,32;CL:0000037,3.68e-10,32;CL:0000837,3.68e-10,32;CL:0000839,2.21e-09,13;CL:0000763,9.61e-08,16;CL:0002320,3.85e-07,46;CL:0000134,3.85e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.19e-12!48;UBERON:0002390!1.50e-10!45;UBERON:0003061!1.50e-10!45;UBERON:0000065!3.88e-10!41;UBERON:0001004!8.10e-10!42;UBERON:0002384!3.37e-09!46;UBERON:0003126!6.11e-09!3;UBERON:0001005!6.11e-09!3;UBERON:0007196!6.11e-09!3;UBERON:0001558!6.11e-09!3;UBERON:0002405!1.62e-08!70;UBERON:0005178!2.05e-08!17;UBERON:0005181!2.05e-08!17;UBERON:0002224!2.05e-08!17;UBERON:0000915!2.05e-08!17;UBERON:0008947!2.05e-08!17;UBERON:0003258!2.05e-08!17;UBERON:0000072!3.21e-07!27 | |ontology_enrichment_uberon=UBERON:0002193!1.19e-12!48;UBERON:0002390!1.50e-10!45;UBERON:0003061!1.50e-10!45;UBERON:0000065!3.88e-10!41;UBERON:0001004!8.10e-10!42;UBERON:0002384!3.37e-09!46;UBERON:0003126!6.11e-09!3;UBERON:0001005!6.11e-09!3;UBERON:0007196!6.11e-09!3;UBERON:0001558!6.11e-09!3;UBERON:0002405!1.62e-08!70;UBERON:0005178!2.05e-08!17;UBERON:0005181!2.05e-08!17;UBERON:0002224!2.05e-08!17;UBERON:0000915!2.05e-08!17;UBERON:0008947!2.05e-08!17;UBERON:0003258!2.05e-08!17;UBERON:0000072!3.21e-07!27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.82e-17,3;UBERON:0001005,2.82e-17,3;UBERON:0007196,2.82e-17,3;UBERON:0001558,2.82e-17,3;UBERON:0002371,9.61e-08,16;UBERON:0002384,3.85e-07,46 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0.387369970324729,1.68946466582,0.936258105287974,0,0.0797721589953364,0,0.0874204024189974,0.333109761815663,0.404950534779652,0.699561878128147,2.05050407482854,1.91960207048034,1.27316895539409,0,0.0992909512008853,0,0,0.22940928106717,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9259563027921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865964164044856,1.52015919285059,1.01104889002957,0.22836775943812,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0.915112692826091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0.387369970324729,1.68946466582,0.936258105287974,0,0.0797721589953364,0,0.0874204024189974,0.333109761815663,0.404950534779652,0.699561878128147,2.05050407482854,1.91960207048034,1.27316895539409,0,0.0992909512008853,0,0,0.22940928106717,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9259563027921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865964164044856,1.52015919285059,1.01104889002957,0.22836775943812,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0.915112692826091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:36397620..36397624,+ | |short_description=p@chr12:36397620..36397624,+ | ||
}} | }} |
Latest revision as of 00:20, 5 August 2015
Short description: | p@chr12:36397620..36397624, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:36397620..36397624, + |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.83e-19 | 6 |
megakaryocyte | 1.83e-19 | 6 |
duct epithelial cell | 2.82e-17 | 3 |
epithelial cell of tracheobronchial tree | 2.82e-17 | 3 |
branched duct epithelial cell | 2.82e-17 | 3 |
epithelial cell of lower respiratory tract | 2.82e-17 | 3 |
respiratory epithelial cell | 2.82e-17 | 3 |
tracheal epithelial cell | 2.82e-17 | 3 |
tracheoblast | 2.82e-17 | 3 |
lymphocyte of B lineage | 3.62e-14 | 1 |
B cell | 3.62e-14 | 1 |
pro-B cell | 3.62e-14 | 1 |
megakaryocyte-erythroid progenitor cell | 3.07e-13 | 9 |
hematopoietic lineage restricted progenitor cell | 6.45e-13 | 25 |
hematopoietic cell | 3.68e-10 | 32 |
hematopoietic oligopotent progenitor cell | 3.68e-10 | 32 |
hematopoietic stem cell | 3.68e-10 | 32 |
hematopoietic multipotent progenitor cell | 3.68e-10 | 32 |
myeloid lineage restricted progenitor cell | 2.21e-09 | 13 |
myeloid cell | 9.61e-08 | 16 |
connective tissue cell | 3.85e-07 | 46 |
mesenchymal cell | 3.85e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.82e-17 | 3 |
respiratory airway | 2.82e-17 | 3 |
tracheobronchial tree | 2.82e-17 | 3 |
lower respiratory tract | 2.82e-17 | 3 |
bone marrow | 9.61e-08 | 16 |
connective tissue | 3.85e-07 | 46 |