FFCP PHASE1:Mm9::chr17:6106464..6106482,+: Difference between revisions
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{{FFCP|EntrezGene=68842|HGNC=|MCL_coexpression_id=7|UniProt=D3Z003|association_with_transcript=0bp_to_ENSMUST00000142030_5end|description=CAGE_peak_12_at_Tulp4_5end|id=chr17:6106464..6106482,+|ontology_enrichment_celltype=CL:0000393!3.22e-10!39;CL:0000211!3.22e-10!39;CL:0000540!1.34e-08!33;CL:0000047!1.34e-08!33;CL:0000031!1.34e-08!33;CL:0000404!1.34e-08!33;CL:0000055!1.90e-08!50;CL:0000117!5.22e-08!23;CL:0000337!5.22e-08!23;CL:0000221!1.21e-07!44;CL:0000133!1.21e-07!44;CL:0002319!2.75e-07!43|ontology_enrichment_celltype_v019_2=CL:0000192,1.78e-18,3;CL:0000359,1.78e-18,3;CL:0002539,1.78e-18,3;CL:0000514,1.78e-18,3;CL:0000217,9.57e-13,2;CL:0000328,9.57e-13,2;CL:0002573,9.57e-13,2;CL:0002376,9.57e-13,2;CL:0000218,9.57e-13,2;CL:0000692,9.57e-13,2;CL:0002377,9.57e-13,2;CL:0002375,9.57e-13,2;CL:0000680,1.58e-09,6;CL:0000187,1.58e-09,6;CL:0000056,1.58e-09,6;CL:0002613,5.41e-09,3;CL:0000215,8.49e-09,3;CL:0000222,3.07e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.40e-14!52;UBERON:0005068!3.40e-14!52;UBERON:0006241!3.40e-14!52;UBERON:0007135!3.40e-14!52;UBERON:0000073!2.22e-13!75;UBERON:0001016!2.22e-13!75;UBERON:0002020!7.70e-13!34;UBERON:0001017!4.81e-12!73;UBERON:0005743!4.81e-12!73;UBERON:0002616!5.83e-11!49;UBERON:0000955!1.69e-10!50;UBERON:0006238!1.69e-10!50;UBERON:0002791!9.42e-10!29;UBERON:0003528!9.42e-10!29;UBERON:0001893!9.42e-10!29;UBERON:0003080!2.12e-09!40;UBERON:0002346!3.15e-09!71;UBERON:0003075!3.15e-09!71;UBERON:0007284!3.15e-09!71;UBERON:0002780!3.24e-09!39;UBERON:0001890!3.24e-09!39;UBERON:0006240!3.24e-09!39;UBERON:0000033!2.45e-08!63;UBERON:0004121!6.79e-08!102;UBERON:0000924!6.79e-08!102;UBERON:0006601!6.79e-08!102;UBERON:0007811!3.26e-07!86;UBERON:0003056!5.27e-07!49;UBERON:0002420!7.05e-07!8;UBERON:0007245!7.05e-07!8;UBERON:0010009!7.05e-07!8;UBERON:0010011!7.05e-07!8;UBERON:0000454!7.05e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.78e-18,3;UBERON:0004237,1.78e-18,3;UBERON:0004695,1.78e-18,3;UBERON:0002111,1.78e-18,3;UBERON:0004178,1.78e-18,3;UBERON:0000947,5.16e-14,4;UBERON:0001637,5.16e-14,4;UBERON:0004573,5.16e-14,4;UBERON:0003509,5.16e-14,4;UBERON:0004571,5.16e-14,4;UBERON:0010191,5.16e-14,4;UBERON:0004572,5.16e-14,4;UBERON:0000055,2.51e-11,5;UBERON:0007500,2.51e-11,5;UBERON:0001981,2.51e-11,5;UBERON:0002049,2.51e-11,5;UBERON:0007798,2.51e-11,5;UBERON:0004537,2.51e-11,5;UBERON:0006965,2.51e-11,5;UBERON:0002021,1.66e-09,10;UBERON:0000411,1.66e-09,10;UBERON:0001950,1.66e-09,10;UBERON:0002020,7.99e-08,34;UBERON:0003528,6.08e-07,29;UBERON:0002791,6.08e-07,29;UBERON:0001893,6.08e-07,29|phase1_expression=0.480446541314382,0,0,0,0,0.33575854382378,0,0.516493293766305,8.16574588479667,8.19225842126977,0,0.319088635981346,0.171200729931206,0.34968160967599,0,0,0,0,0.137114433605739,0,0.680346321208558,0,0,0.159992422793407,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,1.6366586336825,1.92616169317078,1.83546752161682,0,0.436050312760893,0,0,0,0,0.167782606057736,0,0.336093799142464,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0.420649922702764,0.571301968807607,0.220868540951614,0.61245399607477,0.958454710182364,0,0,0.255374676170375,0.46081959976873,0.659431438650969,1.82975287204819,2.08365348222704,0.279182999001381,0.56276261003168,0.45839474333043,1.17851434189467,0.711858403995515,0.745597783301202,1.96888102666279,1.20914496170857,0.579728977403356,0,0.679971333707751,0,0,0,0,0.511290967734173,0,0.70667914902068,0.281686839553361,0,0,0,0.432982082022428,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0.599902730993408,0.127070227073065,0.149790639404823,0.457500602818626,0.879580464790051,0.521472960576829,0.511430914660661,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0.136072998302656,0,0.187403449119458,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0.720332286654991,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0.80275294993896,0.586058432961016,0.163934945376675,0,0,0.780877488593277,0.215423397732799,0.238968797952552,0.222798674082394,0.849229592366497,0,0,0,0,0.425820255624806,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0.258717367565509,0,0,0,0.329098041204242,0,0,0,0,0,0.322928853391811,0.120625849856312,0,0,0,1.29797711407357,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0.194915761479505,0,0,0,0,0.0897138566094757,0,0.19318959403219,0,0,0.214368379079066,0,1.12950368523413,1.38097570952153,0,0.343706364687375,0,0,0,0.900642406448441,2.71885445390523,1.03552062350364,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0,0.342869252385415,0,0.476872379894642,0,0,0.25384382367503,0,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0,0,0.385813221962283,0.249810577937946,0,0.644613162144895,0,0,0|short_description=p12@Tulp4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:68842 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z003 | |||
|association_with_transcript=0bp_to_ENSMUST00000142030_5end | |||
|cluster_id=chr17:6106464..6106482,+ | |||
|description=CAGE_peak_12_at_Tulp4_5end | |||
|id=chr17:6106464..6106482,+ | |||
|ontology_enrichment_celltype=CL:0000393!3.22e-10!39;CL:0000211!3.22e-10!39;CL:0000540!1.34e-08!33;CL:0000047!1.34e-08!33;CL:0000031!1.34e-08!33;CL:0000404!1.34e-08!33;CL:0000055!1.90e-08!50;CL:0000117!5.22e-08!23;CL:0000337!5.22e-08!23;CL:0000221!1.21e-07!44;CL:0000133!1.21e-07!44;CL:0002319!2.75e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.78e-18,3;CL:0000359,1.78e-18,3;CL:0002539,1.78e-18,3;CL:0000514,1.78e-18,3;CL:0000217,9.57e-13,2;CL:0000328,9.57e-13,2;CL:0002573,9.57e-13,2;CL:0002376,9.57e-13,2;CL:0000218,9.57e-13,2;CL:0000692,9.57e-13,2;CL:0002377,9.57e-13,2;CL:0002375,9.57e-13,2;CL:0000680,1.58e-09,6;CL:0000187,1.58e-09,6;CL:0000056,1.58e-09,6;CL:0002613,5.41e-09,3;CL:0000215,8.49e-09,3;CL:0000222,3.07e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.40e-14!52;UBERON:0005068!3.40e-14!52;UBERON:0006241!3.40e-14!52;UBERON:0007135!3.40e-14!52;UBERON:0000073!2.22e-13!75;UBERON:0001016!2.22e-13!75;UBERON:0002020!7.70e-13!34;UBERON:0001017!4.81e-12!73;UBERON:0005743!4.81e-12!73;UBERON:0002616!5.83e-11!49;UBERON:0000955!1.69e-10!50;UBERON:0006238!1.69e-10!50;UBERON:0002791!9.42e-10!29;UBERON:0003528!9.42e-10!29;UBERON:0001893!9.42e-10!29;UBERON:0003080!2.12e-09!40;UBERON:0002346!3.15e-09!71;UBERON:0003075!3.15e-09!71;UBERON:0007284!3.15e-09!71;UBERON:0002780!3.24e-09!39;UBERON:0001890!3.24e-09!39;UBERON:0006240!3.24e-09!39;UBERON:0000033!2.45e-08!63;UBERON:0004121!6.79e-08!102;UBERON:0000924!6.79e-08!102;UBERON:0006601!6.79e-08!102;UBERON:0007811!3.26e-07!86;UBERON:0003056!5.27e-07!49;UBERON:0002420!7.05e-07!8;UBERON:0007245!7.05e-07!8;UBERON:0010009!7.05e-07!8;UBERON:0010011!7.05e-07!8;UBERON:0000454!7.05e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.78e-18,3;UBERON:0004237,1.78e-18,3;UBERON:0004695,1.78e-18,3;UBERON:0002111,1.78e-18,3;UBERON:0004178,1.78e-18,3;UBERON:0000947,5.16e-14,4;UBERON:0001637,5.16e-14,4;UBERON:0004573,5.16e-14,4;UBERON:0003509,5.16e-14,4;UBERON:0004571,5.16e-14,4;UBERON:0010191,5.16e-14,4;UBERON:0004572,5.16e-14,4;UBERON:0000055,2.51e-11,5;UBERON:0007500,2.51e-11,5;UBERON:0001981,2.51e-11,5;UBERON:0002049,2.51e-11,5;UBERON:0007798,2.51e-11,5;UBERON:0004537,2.51e-11,5;UBERON:0006965,2.51e-11,5;UBERON:0002021,1.66e-09,10;UBERON:0000411,1.66e-09,10;UBERON:0001950,1.66e-09,10;UBERON:0002020,7.99e-08,34;UBERON:0003528,6.08e-07,29;UBERON:0002791,6.08e-07,29;UBERON:0001893,6.08e-07,29 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0.33575854382378,0,0.516493293766305,8.16574588479667,8.19225842126977,0,0.319088635981346,0.171200729931206,0.34968160967599,0,0,0,0,0.137114433605739,0,0.680346321208558,0,0,0.159992422793407,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,1.6366586336825,1.92616169317078,1.83546752161682,0,0.436050312760893,0,0,0,0,0.167782606057736,0,0.336093799142464,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0.420649922702764,0.571301968807607,0.220868540951614,0.61245399607477,0.958454710182364,0,0,0.255374676170375,0.46081959976873,0.659431438650969,1.82975287204819,2.08365348222704,0.279182999001381,0.56276261003168,0.45839474333043,1.17851434189467,0.711858403995515,0.745597783301202,1.96888102666279,1.20914496170857,0.579728977403356,0,0.679971333707751,0,0,0,0,0.511290967734173,0,0.70667914902068,0.281686839553361,0,0,0,0.432982082022428,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0.599902730993408,0.127070227073065,0.149790639404823,0.457500602818626,0.879580464790051,0.521472960576829,0.511430914660661,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0.136072998302656,0,0.187403449119458,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0.720332286654991,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0.80275294993896,0.586058432961016,0.163934945376675,0,0,0.780877488593277,0.215423397732799,0.238968797952552,0.222798674082394,0.849229592366497,0,0,0,0,0.425820255624806,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0.258717367565509,0,0,0,0.329098041204242,0,0,0,0,0,0.322928853391811,0.120625849856312,0,0,0,1.29797711407357,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0.194915761479505,0,0,0,0,0.0897138566094757,0,0.19318959403219,0,0,0.214368379079066,0,1.12950368523413,1.38097570952153,0,0.343706364687375,0,0,0,0.900642406448441,2.71885445390523,1.03552062350364,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0,0.342869252385415,0,0.476872379894642,0,0,0.25384382367503,0,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0,0,0.385813221962283,0.249810577937946,0,0.644613162144895,0,0,0 | |||
|short_description=p12@Tulp4 | |||
}} |
Revision as of 05:16, 5 August 2015
Short description: | p12@Tulp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Tulp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 0bp_to_ENSMUST00000142030_5end |
EntrezGene: | 68842 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.78e-18 | 3 |
vascular associated smooth muscle cell | 1.78e-18 | 3 |
aortic smooth muscle cell | 1.78e-18 | 3 |
smooth muscle myoblast | 1.78e-18 | 3 |
insulating cell | 9.57e-13 | 2 |
myelin accumulating cell | 9.57e-13 | 2 |
Schwann cell | 9.57e-13 | 2 |
non-myelinating Schwann cell | 9.57e-13 | 2 |
myelinating Schwann cell;;Schwann cell | 9.57e-13 | 2 |
terminal Schwann cell | 9.57e-13 | 2 |
immature Schwann cell | 9.57e-13 | 2 |
Schwann cell precursor | 9.57e-13 | 2 |
muscle precursor cell | 1.58e-09 | 6 |
muscle cell | 1.58e-09 | 6 |
myoblast | 1.58e-09 | 6 |
striatum neuron | 5.41e-09 | 3 |
barrier cell | 8.49e-09 | 3 |
mesodermal cell | 3.07e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.78e-18 | 3 |
blood vessel smooth muscle | 1.78e-18 | 3 |
arterial system smooth muscle | 1.78e-18 | 3 |
artery smooth muscle tissue | 1.78e-18 | 3 |
aorta smooth muscle tissue | 1.78e-18 | 3 |
aorta | 5.16e-14 | 4 |
artery | 5.16e-14 | 4 |
systemic artery | 5.16e-14 | 4 |
arterial blood vessel | 5.16e-14 | 4 |
systemic arterial system | 5.16e-14 | 4 |
aortic system | 5.16e-14 | 4 |
arterial system | 5.16e-14 | 4 |
vessel | 2.51e-11 | 5 |
epithelial tube open at both ends | 2.51e-11 | 5 |
blood vessel | 2.51e-11 | 5 |
vasculature | 2.51e-11 | 5 |
vascular system | 2.51e-11 | 5 |
blood vasculature | 2.51e-11 | 5 |
vascular cord | 2.51e-11 | 5 |
occipital lobe | 1.66e-09 | 10 |
visual cortex | 1.66e-09 | 10 |
neocortex | 1.66e-09 | 10 |
gray matter | 7.99e-08 | 34 |
brain grey matter | 6.08e-07 | 29 |
regional part of telencephalon | 6.08e-07 | 29 |
telencephalon | 6.08e-07 | 29 |