FFCP PHASE1:Mm9::chr1:112856387..112856393,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:112856387..112856393,- | |||
|description=CAGE_peak_at_chr1:112856387..112856393,- | |description=CAGE_peak_at_chr1:112856387..112856393,- | ||
|id=chr1:112856387..112856393,- | |id=chr1:112856387..112856393,- | ||
|ontology_enrichment_celltype=CL:0000107!1.30e-37!9;CL:0000221!4.45e-14!44;CL:0000133!4.45e-14!44;CL:0000630!6.17e-13!3;CL:0002319!2.68e-12!43;CL:0000540!2.06e-11!33;CL:0000047!2.06e-11!33;CL:0000031!2.06e-11!33;CL:0000404!2.06e-11!33;CL:0000055!2.80e-10!50;CL:0000325!1.83e-09!2;CL:0000217!1.83e-09!2;CL:0000328!1.83e-09!2;CL:0002573!1.83e-09!2;CL:0002376!1.83e-09!2;CL:0000218!1.83e-09!2;CL:0000692!1.83e-09!2;CL:0002377!1.83e-09!2;CL:0002375!1.83e-09!2;CL:0000393!2.11e-09!39;CL:0000211!2.11e-09!39;CL:0002321!5.51e-08!70;CL:0000220!5.51e-08!70 | |ontology_enrichment_celltype=CL:0000107!1.30e-37!9;CL:0000221!4.45e-14!44;CL:0000133!4.45e-14!44;CL:0000630!6.17e-13!3;CL:0002319!2.68e-12!43;CL:0000540!2.06e-11!33;CL:0000047!2.06e-11!33;CL:0000031!2.06e-11!33;CL:0000404!2.06e-11!33;CL:0000055!2.80e-10!50;CL:0000325!1.83e-09!2;CL:0000217!1.83e-09!2;CL:0000328!1.83e-09!2;CL:0002573!1.83e-09!2;CL:0002376!1.83e-09!2;CL:0000218!1.83e-09!2;CL:0000692!1.83e-09!2;CL:0002377!1.83e-09!2;CL:0002375!1.83e-09!2;CL:0000393!2.11e-09!39;CL:0000211!2.11e-09!39;CL:0002321!5.51e-08!70;CL:0000220!5.51e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,7.86e-78,9;CL:0000540,4.47e-21,33;CL:0000047,4.47e-21,33;CL:0000031,4.47e-21,33;CL:0000404,4.47e-21,33;CL:0002319,5.82e-20,43;CL:0000221,1.69e-19,44;CL:0000133,1.69e-19,44;CL:0000393,8.86e-18,39;CL:0000211,8.86e-18,39;CL:0002321,4.32e-12,70;CL:0000723,2.51e-07,91;CL:0000048,2.51e-07,91;CL:0000034,7.79e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.35e-45!11;UBERON:0002410!1.30e-37!9;UBERON:0000011!6.93e-14!3;UBERON:0000013!1.02e-13!3;UBERON:0002005!3.52e-13!3;UBERON:0005428!3.52e-13!3;UBERON:0000073!1.34e-08!75;UBERON:0001016!1.34e-08!75;UBERON:0004121!1.07e-07!102;UBERON:0000924!1.07e-07!102;UBERON:0006601!1.07e-07!102 | |ontology_enrichment_uberon=UBERON:0000010!1.35e-45!11;UBERON:0002410!1.30e-37!9;UBERON:0000011!6.93e-14!3;UBERON:0000013!1.02e-13!3;UBERON:0002005!3.52e-13!3;UBERON:0005428!3.52e-13!3;UBERON:0000073!1.34e-08!75;UBERON:0001016!1.34e-08!75;UBERON:0004121!1.07e-07!102;UBERON:0000924!1.07e-07!102;UBERON:0006601!1.07e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,9.83e-79,11;UBERON:0002410,7.86e-78,9;UBERON:0000011,1.68e-27,3;UBERON:0000013,3.80e-27,3;UBERON:0010313,5.19e-26,3;UBERON:0002342,5.19e-26,3;UBERON:0002005,5.19e-26,3;UBERON:0005428,5.19e-26,3;UBERON:0005062,5.19e-26,3;UBERON:0001016,2.99e-11,75;UBERON:0001017,2.80e-09,73;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.681535739998656,2.41828992341714,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,1.57754109708128,1.56175497718655,1.29254038639679,1.67278158566786,3.7875774594007,4.52922449262132,3.64329631507405,2.33804686329049,1.97643888973262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.681535739998656,2.41828992341714,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,1.57754109708128,1.56175497718655,1.29254038639679,1.67278158566786,3.7875774594007,4.52922449262132,3.64329631507405,2.33804686329049,1.97643888973262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:112856387..112856393,- | |short_description=p@chr1:112856387..112856393,- | ||
}} | }} |
Latest revision as of 15:26, 4 August 2015
Short description: | p@chr1:112856387..112856393, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:112856387..112856393, - |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 7.86e-78 | 9 |
neuron | 4.47e-21 | 33 |
neuronal stem cell | 4.47e-21 | 33 |
neuroblast | 4.47e-21 | 33 |
electrically signaling cell | 4.47e-21 | 33 |
neural cell | 5.82e-20 | 43 |
ectodermal cell | 1.69e-19 | 44 |
neurectodermal cell | 1.69e-19 | 44 |
electrically responsive cell | 8.86e-18 | 39 |
electrically active cell | 8.86e-18 | 39 |
embryonic cell | 4.32e-12 | 70 |
somatic stem cell | 2.51e-07 | 91 |
multi fate stem cell | 2.51e-07 | 91 |
stem cell | 7.79e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 9.83e-79 | 11 |
autonomic nervous system | 7.86e-78 | 9 |
parasympathetic nervous system | 1.68e-27 | 3 |
sympathetic nervous system | 3.80e-27 | 3 |
neural crest-derived structure | 5.19e-26 | 3 |
neural crest | 5.19e-26 | 3 |
enteric nervous system | 5.19e-26 | 3 |
vagal neural crest | 5.19e-26 | 3 |
neural fold | 5.19e-26 | 3 |
nervous system | 2.99e-11 | 75 |
central nervous system | 2.80e-09 | 73 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |