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CL:0000076

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Name:squamous epithelial cell
Namespace:FANTOM


Ontology association

Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.



link to ontology dataset


data

Parents

is_a:CL:0000066(epithelial cell)



Children


is a:CL:0000071 (blood vessel endothelial cell),CL:0000077 (mesothelial cell),CL:0000240 (stratified squamous epithelial cell),CL:0000575 (corneal epithelial cell)
derives from:FF:0102024 (squamous cell carcinoma cell line sample)

Ontology Tree: Loaded from BioPortal


FF samples

It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens) Mouse (Mus musculus)



Enrichment analysis: top 100 FFCP enriched with this ontology term
TOP 100 FANTOM5 Cage Peaks enriched with CL:0000076 (squamous epithelial cell), sorted by p-values
Analyst: Hideya Kawaji



link to source dataset
human : data

mouse : data

P-valueFFCPShort description
4.01e-41FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_0ed4a3c11d68531ab3c730242386966dp@chr18:33046982..33046991, -
4.01e-41FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_0ed4a3c11d68531ab3c730242386966dp@chr18:33046982..33046991, -
7.09e-34FFCP PHASE1:Hg19::chr7:139741849..139741879,-#_21c9d8faeb544156c0acf9c3d540b5f7p12@PARP12
7.09e-34FFCP PHASE2:Hg19::chr7:139741849..139741879,-#_21c9d8faeb544156c0acf9c3d540b5f7p12@PARP12
9.9e-34FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_f7d3f6d1aaed2da2f1a7610cd6caf578p1@MIR216A
9.9e-34FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_f7d3f6d1aaed2da2f1a7610cd6caf578p1@MIR216A
6.61e-33FFCP PHASE2:Hg19::chr6:78171774..78171792,+#_1f80586e1ef999f3c0c6b65cd342e5aep@chr6:78171774..78171792, +
6.61e-33FFCP PHASE1:Hg19::chr6:78171774..78171792,+#_1f80586e1ef999f3c0c6b65cd342e5aep@chr6:78171774..78171792, +
1.58e-32FFCP PHASE2:Hg19::chr18:33047157..33047168,-#_fb04eb88c2f920e0333da37d7ebc4935p@chr18:33047157..33047168, -
1.58e-32FFCP PHASE1:Hg19::chr18:33047157..33047168,-#_fb04eb88c2f920e0333da37d7ebc4935p@chr18:33047157..33047168, -
6.55e-32FFCP PHASE1:Hg19::chr7:139741594..139741615,-#_2ac036d005a688273a47f675e89a1d9cp5@PARP12
6.55e-32FFCP PHASE2:Hg19::chr7:139741594..139741615,-#_2ac036d005a688273a47f675e89a1d9cp5@PARP12
9.29e-32FFCP PHASE2:Hg19::chr4:145566874..145566889,+#_2c18878af97a00b3739503da5db0320bp15@HHIP
9.29e-32FFCP PHASE1:Hg19::chr4:145566874..145566889,+#_2c18878af97a00b3739503da5db0320bp15@HHIP
1.88e-31FFCP PHASE1:Hg19::chr12:118112251..118112272,-#_51c9b7cb826be7d7e7ae4dc83fef876dp12@KSR2
1.88e-31FFCP PHASE2:Hg19::chr12:118112251..118112272,-#_51c9b7cb826be7d7e7ae4dc83fef876dp12@KSR2
2.75e-31FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_9603a88e17fc5739dee25f2a94fa40fap@chr3:43538305..43538325, -
2.75e-31FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_9603a88e17fc5739dee25f2a94fa40fap@chr3:43538305..43538325, -
6.38e-30FFCP PHASE1:Hg19::chr10:50153703..50153720,+#_877b0fb89ec378bb607eb84a4f4ee232p7@WDFY4
6.38e-30FFCP PHASE2:Hg19::chr10:50153703..50153720,+#_877b0fb89ec378bb607eb84a4f4ee232p7@WDFY4
1.0e-29FFCP PHASE2:Hg19::chr2:36796813..36796868,-#_b50bdd8d9695786eadb876f4902559f7p@chr2:36796813..36796868, -
1.0e-29FFCP PHASE1:Hg19::chr2:36796813..36796868,-#_b50bdd8d9695786eadb876f4902559f7p@chr2:36796813..36796868, -
1.02e-29FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_49b93ce8a0ee42a61ec0cc5232925282p@chrX:71299684..71299699, +
1.02e-29FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_49b93ce8a0ee42a61ec0cc5232925282p@chrX:71299684..71299699, +
3.22e-29FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_0d041820adea83f09ddf3ecfe51a0960p6@WDFY4
3.22e-29FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_0d041820adea83f09ddf3ecfe51a0960p6@WDFY4
8.8e-29FFCP PHASE1:Hg19::chr12:7585997..7586021,-#_df5a511c5b99c4622cfec5295cc84239p@chr12:7585997..7586021, -
8.8e-29FFCP PHASE2:Hg19::chr12:7585997..7586021,-#_df5a511c5b99c4622cfec5295cc84239p@chr12:7585997..7586021, -
4.75e-28FFCP PHASE2:Hg19::chr12:52080755..52080778,+#_da53d6c497354c30ef8c80f812959a87p@chr12:52080755..52080778, +
4.75e-28FFCP PHASE1:Hg19::chr12:52080755..52080778,+#_da53d6c497354c30ef8c80f812959a87p@chr12:52080755..52080778, +
5.89e-28FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_0c364aa7c4f5f5d73cd227ab2d0364bfp2@BMX
5.89e-28FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_0c364aa7c4f5f5d73cd227ab2d0364bfp2@BMX
8.93e-28FFCP PHASE1:Hg19::chr3:58034268..58034295,+#_cc9b39523b734246ed242391c5adc946p@chr3:58034268..58034295, +
8.93e-28FFCP PHASE2:Hg19::chr3:58034268..58034295,+#_cc9b39523b734246ed242391c5adc946p@chr3:58034268..58034295, +
1.03e-27FFCP PHASE2:Hg19::chr14:75469820..75469826,+#_ae3c4d484c04d447ab1e0b7f100da36cp4@EIF2B2
1.03e-27FFCP PHASE1:Hg19::chr14:75469820..75469826,+#_ae3c4d484c04d447ab1e0b7f100da36cp4@EIF2B2
1.63e-27FFCP PHASE1:Hg19::chr7:150329732..150329739,-#_d58884ce6da3d6afec5c7b1a7563d7a5p8@GIMAP6
1.63e-27FFCP PHASE2:Hg19::chr7:150329732..150329739,-#_d58884ce6da3d6afec5c7b1a7563d7a5p8@GIMAP6
1.67e-27FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_563975f4f7926df22e7466727aa1f540p@chr6:3753188..3753192, -
1.67e-27FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_563975f4f7926df22e7466727aa1f540p@chr6:3753188..3753192, -
1.74e-27FFCP PHASE2:Hg19::chr12:12491541..12491552,-#_d92ed2676740ff8e9045a8e6c30fefa5p11@MANSC1
1.74e-27FFCP PHASE1:Hg19::chr12:12491541..12491552,-#_d92ed2676740ff8e9045a8e6c30fefa5p11@MANSC1
1.82e-27FFCP PHASE2:Hg19::chr6:148664333..148664338,-#_fbd328bfeddc6a91b3d27e98fc7219b0p@chr6:148664333..148664338, -
1.82e-27FFCP PHASE1:Hg19::chr6:148664333..148664338,-#_fbd328bfeddc6a91b3d27e98fc7219b0p@chr6:148664333..148664338, -
2.66e-27FFCP PHASE1:Hg19::chr10:99655692..99655725,-#_97f014acbb120c2e8d63e7b9f116b3f0p@chr10:99655692..99655725, -
2.66e-27FFCP PHASE2:Hg19::chr10:99655692..99655725,-#_97f014acbb120c2e8d63e7b9f116b3f0p@chr10:99655692..99655725, -
3.22e-27FFCP PHASE1:Hg19::chr1:6479968..6479986,-#_46fa6aa3df0fc3b97a8e0de4cee72851p1@HES2
3.22e-27FFCP PHASE2:Hg19::chr1:6479968..6479986,-#_46fa6aa3df0fc3b97a8e0de4cee72851p1@HES2
4.93e-27FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_f8acf7b16fcd3176da153a868ee46c8ep1@ENST00000513158
4.93e-27FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_f8acf7b16fcd3176da153a868ee46c8ep1@ENST00000513158
5.58e-27FFCP PHASE2:Hg19::chr15:83953373..83953386,-#_719128b844eb9b27c80be91b440bb79ep2@BNC1
5.58e-27FFCP PHASE1:Hg19::chr15:83953373..83953386,-#_719128b844eb9b27c80be91b440bb79ep2@BNC1
5.61e-27FFCP PHASE2:Hg19::chr9:139563124..139563129,+#_4fb42e1a4c5e6ea025f2f7307495589ep@chr9:139563124..139563129, +
5.61e-27FFCP PHASE1:Hg19::chr9:139563124..139563129,+#_4fb42e1a4c5e6ea025f2f7307495589ep@chr9:139563124..139563129, +
8.05e-27FFCP PHASE2:Hg19::chr12:80084018..80084035,-#_322da4dbda8d3e86f555b571a24a4ab3p17@PAWR
8.05e-27FFCP PHASE1:Hg19::chr12:80084018..80084035,-#_322da4dbda8d3e86f555b571a24a4ab3p17@PAWR
1.95e-26FFCP PHASE1:Hg19::chr19:38794797..38794810,+#_845ea808f255b47cfc5d42bdf1a95055p2@C19orf33
1.95e-26FFCP PHASE2:Hg19::chr19:38794797..38794810,+#_845ea808f255b47cfc5d42bdf1a95055p2@C19orf33
2.17e-26FFCP PHASE1:Hg19::chr6:78171746..78171769,+#_bc1fffa18a848f9e946a25d45d9ad5f2p@chr6:78171746..78171769, +
2.17e-26FFCP PHASE2:Hg19::chr6:78171746..78171769,+#_bc1fffa18a848f9e946a25d45d9ad5f2p@chr6:78171746..78171769, +
3.65e-26FFCP PHASE2:Hg19::chr7:150690812..150690817,+#_845805177440e0cf29a0415a0bf011fdp10@NOS3
3.65e-26FFCP PHASE1:Hg19::chr7:150690812..150690817,+#_845805177440e0cf29a0415a0bf011fdp10@NOS3
4.74e-26FFCP PHASE1:Hg19::chr5:176433333..176433349,-#_aabc9b6bbda6e0b45ce5c1775cf22ceap11@UIMC1
4.74e-26FFCP PHASE2:Hg19::chr5:176433333..176433349,-#_aabc9b6bbda6e0b45ce5c1775cf22ceap11@UIMC1
8.11e-26FFCP PHASE2:Hg19::chr2:237076069..237076110,+#_c7f735a7f852d3026af7d5d8d7ff93e8p1@ENST00000415226, p1@ENST00000483218
8.11e-26FFCP PHASE1:Hg19::chr2:237076069..237076110,+#_c7f735a7f852d3026af7d5d8d7ff93e8p1@ENST00000415226, p1@ENST00000483218
8.2e-26FFCP PHASE2:Hg19::chr5:34656634..34656645,+#_bcd7c391f2720e76cb51e5a6b6b171a7p15@RAI14
8.2e-26FFCP PHASE1:Hg19::chr5:34656634..34656645,+#_bcd7c391f2720e76cb51e5a6b6b171a7p15@RAI14
1.05e-25FFCP PHASE1:Hg19::chr4:79472785..79472796,+#_c335fc4dfe78663ea9dcd5402233dc2fp3@ANXA3
1.05e-25FFCP PHASE2:Hg19::chr4:79472785..79472796,+#_c335fc4dfe78663ea9dcd5402233dc2fp3@ANXA3
1.3e-25FFCP PHASE1:Hg19::chr14:38725228..38725236,-#_db378bfc394b48cb1d70b6be1cabb0c4p5@CLEC14A
1.3e-25FFCP PHASE2:Hg19::chr14:38725228..38725236,-#_db378bfc394b48cb1d70b6be1cabb0c4p5@CLEC14A
1.81e-25FFCP PHASE2:Hg19::chr13:34727644..34727660,-#_8e9e1ce60b3a6783ce841cfecc0da953p@chr13:34727644..34727660, -
1.81e-25FFCP PHASE1:Hg19::chr13:34727644..34727660,-#_8e9e1ce60b3a6783ce841cfecc0da953p@chr13:34727644..34727660, -
1.89e-25FFCP PHASE1:Hg19::chr14:59830398..59830424,+#_8787713b364ac162d31ba17533329fa9p@chr14:59830398..59830424, +
1.89e-25FFCP PHASE2:Hg19::chr14:59830398..59830424,+#_8787713b364ac162d31ba17533329fa9p@chr14:59830398..59830424, +
3.02e-25FFCP PHASE2:Hg19::chr17:62084108..62084111,-#_6b1de2495f8f8caffbdad2c6b3189064p5@ICAM2
3.02e-25FFCP PHASE1:Hg19::chr17:62084108..62084111,-#_6b1de2495f8f8caffbdad2c6b3189064p5@ICAM2
3.33e-25FFCP PHASE2:Hg19::chr1:22264210..22264241,+#_106ff8f439e2e68230245f0532389b38p@chr1:22264210..22264241, +
3.33e-25FFCP PHASE1:Hg19::chr1:22264210..22264241,+#_106ff8f439e2e68230245f0532389b38p@chr1:22264210..22264241, +
4.29e-25FFCP PHASE2:Hg19::chr6:11607864..11607875,+#_2df8e7e4db5c5b50ab0e56e7a2643c23p@chr6:11607864..11607875, +
4.29e-25FFCP PHASE1:Hg19::chr6:11607864..11607875,+#_2df8e7e4db5c5b50ab0e56e7a2643c23p@chr6:11607864..11607875, +
5.52e-25FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_54dfbb7bee2eda40a5b4936af4cfeb28p@chr11:124761247..124761258, -
5.52e-25FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_54dfbb7bee2eda40a5b4936af4cfeb28p@chr11:124761247..124761258, -
6.31e-25FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_c6e6f33d3550cbbf8598d56841c42aafp@chr12:105863705..105863718, +
6.31e-25FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_c6e6f33d3550cbbf8598d56841c42aafp@chr12:105863705..105863718, +
1.14e-24FFCP PHASE1:Hg19::chr14:38725249..38725254,-#_42721c056c76554b37d35754d8a2f6ccp6@CLEC14A
1.14e-24FFCP PHASE2:Hg19::chr14:38725249..38725254,-#_42721c056c76554b37d35754d8a2f6ccp6@CLEC14A
1.17e-24FFCP PHASE1:Hg19::chr9:139541134..139541139,+#_bc81f65ec8986fb32300dd8cb0cd8044p@chr9:139541134..139541139, +
1.17e-24FFCP PHASE2:Hg19::chr9:139541134..139541139,+#_bc81f65ec8986fb32300dd8cb0cd8044p@chr9:139541134..139541139, +
1.26e-24FFCP PHASE2:Hg19::chr4:85791667..85791699,-#_d2c2751de3411d62611dc2a982d901bdp@chr4:85791667..85791699, -
1.26e-24FFCP PHASE1:Hg19::chr4:85791667..85791699,-#_d2c2751de3411d62611dc2a982d901bdp@chr4:85791667..85791699, -
1.58e-24FFCP PHASE2:Hg19::chr3:148599249..148599271,+#_e164af0010c15f8c119e11b4390307dap2@CPA3
1.58e-24FFCP PHASE1:Hg19::chr3:148599249..148599271,+#_e164af0010c15f8c119e11b4390307dap2@CPA3
2.44e-24FFCP PHASE2:Hg19::chr9:139543445..139543462,+#_bee8f1ee1f75580ecd6fbf1c1444478ep@chr9:139543445..139543462, +
2.44e-24FFCP PHASE1:Hg19::chr9:139543445..139543462,+#_bee8f1ee1f75580ecd6fbf1c1444478ep@chr9:139543445..139543462, +
3.04e-24FFCP PHASE2:Hg19::chr12:96830523..96830532,+#_2dd2e9ea65514429f8e1249171cdc194p@chr12:96830523..96830532, +
3.04e-24FFCP PHASE1:Hg19::chr12:96830523..96830532,+#_2dd2e9ea65514429f8e1249171cdc194p@chr12:96830523..96830532, +
4.4e-24FFCP PHASE1:Hg19::chr20:50721803..50721857,-#_472ce9d5f9f4a873e546b50f9da9b96ap2@ZFP64
4.4e-24FFCP PHASE2:Hg19::chr20:50721803..50721857,-#_472ce9d5f9f4a873e546b50f9da9b96ap2@ZFP64