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CL:0000066

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Name:epithelial cell
Namespace:FANTOM
Definition:"A cell that is usually found in a two-dimensional sheet with a free surface. The cell has a cytoskeleton that allows for tight cell to cell contact and for cell polarity where apical part is directed towards the lumen and the basal part to the basal lamina." [FB:ma, GOC:tfm, MESH:A.11.436]
Xrefs:
links:

BTO:0000414
FBbt:00000124
FMA:66768

WBbt:0003672
Synonyms: "epitheliocyte" EXACT []


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000548(animal cell)



Children


is a:CL:0000068 (duct epithelial cell),CL:0000075 (columnar/cuboidal epithelial cell),CL:0000076 (squamous epithelial cell),CL:0000079 (stratified epithelial cell),CL:0000082 (epithelial cell of lung),CL:0000083 (epithelial cell of pancreas),CL:0000098 (sensory epithelial cell),CL:0000150 (glandular epithelial cell),CL:0000182 (hepatocyte),CL:0000244 (transitional epithelial cell),CL:0000666 (fenestrated cell),CL:0002076 (endo-epithelial cell),CL:0002077 (ecto-epithelial cell),CL:0002078 (meso-epithelial cell),CL:0002222 (vertebrate lens cell),CL:0002327 (mammary gland epithelial cell),CL:0002518 (kidney epithelial cell),CL:0002535 (epithelial cell of cervix),CL:0002536 (amniotic epithelial cell),CL:0002565 (iris pigment epithelial cell),CL:0002577 (placental epithelial cell),CL:0002586 (retinal pigment epithelial cell),CL:0005012 (multi-ciliated epithelial cell),CL:1000415 (epithelial cell of gall bladder)
derives from:FF:0101120 (epithelial cell line sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000066 (epithelial cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
9.35e-72FFCP PHASE1:Hg19::chr19:38794797..38794810,+#_4e6ded3e4b8c013f62042ce6d2ce9cd9p2@C19orf33
9.35e-72FFCP PHASE2:Hg19::chr19:38794797..38794810,+#_4e6ded3e4b8c013f62042ce6d2ce9cd9p2@C19orf33
4.87e-66FFCP PHASE1:Hg19::chr8:144815966..144815986,-#_f83836debae0e7b7ebf007f003390786p2@FAM83H
4.87e-66FFCP PHASE2:Hg19::chr8:144815966..144815986,-#_f83836debae0e7b7ebf007f003390786p2@FAM83H
4.44e-63FFCP PHASE1:Hg19::chr18:47376197..47376227,-#_dc4b45f9b4ec57d7eb4fab164cf0b487p2@MYO5B
4.44e-63FFCP PHASE2:Hg19::chr18:47376197..47376227,-#_dc4b45f9b4ec57d7eb4fab164cf0b487p2@MYO5B
1.05e-60FFCP PHASE1:Hg19::chr16:1728305..1728324,+#_74b15a328f47dc368f25c08e2f1c3c49p2@HN1L
1.05e-60FFCP PHASE2:Hg19::chr16:1728305..1728324,+#_74b15a328f47dc368f25c08e2f1c3c49p2@HN1L
3.33e-60FFCP PHASE2:Hg19::chr1:16482527..16482546,-#_e7ce4805f8483365662978052fc79562p2@EPHA2
3.33e-60FFCP PHASE1:Hg19::chr1:16482527..16482546,-#_e7ce4805f8483365662978052fc79562p2@EPHA2
4.95e-60FFCP PHASE2:Hg19::chr5:68710906..68710983,+#_4e73b16520adb091f3f9b5082146e1dap1@MARVELD2
4.95e-60FFCP PHASE1:Hg19::chr5:68710906..68710983,+#_4e73b16520adb091f3f9b5082146e1dap1@MARVELD2
2.28e-59FFCP PHASE1:Hg19::chr19:751122..751139,+#_00f5700f51d5ceb473819ba12963104ap1@C19orf21
2.28e-59FFCP PHASE2:Hg19::chr19:751122..751139,+#_00f5700f51d5ceb473819ba12963104ap1@C19orf21
2.41e-59FFCP PHASE2:Hg19::chr1:955448..955508,+#_f7e49d9a54ef1ee7c8f3a36df7ac1f38p1@AGRN
2.41e-59FFCP PHASE1:Hg19::chr1:955448..955508,+#_f7e49d9a54ef1ee7c8f3a36df7ac1f38p1@AGRN
4.14e-59FFCP PHASE1:Hg19::chr2:54784868..54784919,+#_4110e6a44f834cee3fa1eebd3a573e6cp@chr2:54784868..54784919, +
4.14e-59FFCP PHASE2:Hg19::chr2:54784868..54784919,+#_4110e6a44f834cee3fa1eebd3a573e6cp@chr2:54784868..54784919, +
5.64e-59FFCP PHASE2:Hg19::chr16:1728272..1728296,+#_a5b6da62e334961a74c477a19e2caf41p1@HN1L
5.64e-59FFCP PHASE1:Hg19::chr16:1728272..1728296,+#_a5b6da62e334961a74c477a19e2caf41p1@HN1L
8.84e-59FFCP PHASE2:Hg19::chr1:6479968..6479986,-#_a6404775c6d50314120b1a0a5763fbbbp1@HES2
8.84e-59FFCP PHASE1:Hg19::chr1:6479968..6479986,-#_a6404775c6d50314120b1a0a5763fbbbp1@HES2
1.35e-58FFCP PHASE2:Hg19::chr8:144815914..144815961,-#_73048bb8d734464ea87b06a8e9634759p1@FAM83H
1.35e-58FFCP PHASE1:Hg19::chr8:144815914..144815961,-#_73048bb8d734464ea87b06a8e9634759p1@FAM83H
7.96e-58FFCP PHASE1:Hg19::chr19:38794829..38794901,+#_06b08002f08f08022dd1a8b6e431a813p1@C19orf33
7.96e-58FFCP PHASE2:Hg19::chr19:38794829..38794901,+#_06b08002f08f08022dd1a8b6e431a813p1@C19orf33
1.93e-57FFCP PHASE2:Hg19::chr12:53342893..53342911,+#_9d5ed3da7726713689c80eaedd8755c3p1@KRT18
1.93e-57FFCP PHASE1:Hg19::chr12:53342893..53342911,+#_9d5ed3da7726713689c80eaedd8755c3p1@KRT18
2.5e-57FFCP PHASE2:Hg19::chr19:751104..751121,+#_fed9af0b99d62ccef444e3e477d3d4e5p2@C19orf21
2.5e-57FFCP PHASE1:Hg19::chr19:751104..751121,+#_fed9af0b99d62ccef444e3e477d3d4e5p2@C19orf21
7.82e-57FFCP PHASE1:Hg19::chr1:33207381..33207471,+#_5ebb019dbab99ea949bee3bbee1a5ec6p2@KIAA1522
7.82e-57FFCP PHASE2:Hg19::chr1:33207381..33207471,+#_5ebb019dbab99ea949bee3bbee1a5ec6p2@KIAA1522
2.03e-56FFCP PHASE1:Hg19::chr12:52585791..52585806,-#_5d8af02eb9168b9229b01a55ccfe8bfap1@KRT80
2.03e-56FFCP PHASE2:Hg19::chr12:52585791..52585806,-#_5d8af02eb9168b9229b01a55ccfe8bfap1@KRT80
3.8e-56FFCP PHASE1:Hg19::chr16:68679173..68679184,+#_571d22303402803a8bfe213bddbdd143p2@CDH3
3.8e-56FFCP PHASE2:Hg19::chr16:68679173..68679184,+#_571d22303402803a8bfe213bddbdd143p2@CDH3
6.8e-56FFCP PHASE2:Hg19::chr1:27189631..27189648,+#_15e3f6478c0a0ba6bbf09b166c648cfcp1@SFN
6.8e-56FFCP PHASE1:Hg19::chr1:27189631..27189648,+#_15e3f6478c0a0ba6bbf09b166c648cfcp1@SFN
4.25e-55FFCP PHASE1:Hg19::chr1:16482554..16482576,-#_f19e11100e6b67c090b23d5fe794835ep1@EPHA2
4.25e-55FFCP PHASE2:Hg19::chr1:16482554..16482576,-#_f19e11100e6b67c090b23d5fe794835ep1@EPHA2
8.93e-55FFCP PHASE1:Hg19::chr20:361391..361410,+#_172728af2ffe8c28d7538ebdfe75f627p2@TRIB3
8.93e-55FFCP PHASE2:Hg19::chr20:361391..361410,+#_172728af2ffe8c28d7538ebdfe75f627p2@TRIB3
1.64e-54FFCP PHASE1:Hg19::chr17:75277512..75277592,+#_abcc8ae8933ba1d17edb068a2b1e6fabp2@SEPT9
1.64e-54FFCP PHASE2:Hg19::chr17:75277512..75277592,+#_abcc8ae8933ba1d17edb068a2b1e6fabp2@SEPT9
1.98e-54FFCP PHASE2:Hg19::chr1:160990954..160990973,-#_d22b9db85cc1532e7e147e735726a8cap3@F11R
1.98e-54FFCP PHASE1:Hg19::chr1:160990954..160990973,-#_d22b9db85cc1532e7e147e735726a8cap3@F11R
4.24e-54FFCP PHASE1:Hg19::chr1:35246775..35246797,+#_0c616103451b23e4c413429ac475fca8p2@GJB3
4.24e-54FFCP PHASE2:Hg19::chr1:35246775..35246797,+#_0c616103451b23e4c413429ac475fca8p2@GJB3
6.39e-54FFCP PHASE2:Hg19::chr17:4843943..4843963,+#_4fa268db98f5d95cd346020b4f24f14dp3@RNF167
6.39e-54FFCP PHASE1:Hg19::chr17:4843943..4843963,+#_4fa268db98f5d95cd346020b4f24f14dp3@RNF167
6.87e-53FFCP PHASE2:Hg19::chr22:46933332..46933398,-#_acf4a0d8829870c459678f576af67392p2@CELSR1
6.87e-53FFCP PHASE1:Hg19::chr22:46933332..46933398,-#_acf4a0d8829870c459678f576af67392p2@CELSR1
1.17e-52FFCP PHASE1:Hg19::chr8:128306960..128306989,-#_2e95e2340481ef1667d0d6609a637973p@chr8:128306960..128306989, -
1.17e-52FFCP PHASE2:Hg19::chr8:128306960..128306989,-#_2e95e2340481ef1667d0d6609a637973p@chr8:128306960..128306989, -
1.44e-52FFCP PHASE1:Hg19::chr6:10415484..10415508,-#_35c3a3d69e404541ba946347202ca20cp3@TFAP2A
1.44e-52FFCP PHASE2:Hg19::chr6:10415484..10415508,-#_35c3a3d69e404541ba946347202ca20cp3@TFAP2A
1.83e-52FFCP PHASE2:Hg19::chr6:30851840..30851902,+#_43b6c92e80b2926decba16128bfb76ffp4@DDR1
1.83e-52FFCP PHASE1:Hg19::chr6:30851840..30851902,+#_43b6c92e80b2926decba16128bfb76ffp4@DDR1
1.91e-52FFCP PHASE2:Hg19::chr8:82644741..82644791,+#_4fd23d3cd57f536dcaa7935143b5e55dp2@CHMP4C
1.91e-52FFCP PHASE1:Hg19::chr8:82644741..82644791,+#_4fd23d3cd57f536dcaa7935143b5e55dp2@CHMP4C
2.25e-52FFCP PHASE2:Hg19::chr16:68269971..68270059,-#_feb260772e480adecc88c62581caa3a0p1@ESRP2
2.25e-52FFCP PHASE1:Hg19::chr16:68269971..68270059,-#_feb260772e480adecc88c62581caa3a0p1@ESRP2
2.38e-52FFCP PHASE1:Hg19::chr12:80084737..80084763,-#_c8823ca06fb3afb6a78f7ff1c83c5280p3@PAWR
2.38e-52FFCP PHASE2:Hg19::chr12:80084737..80084763,-#_c8823ca06fb3afb6a78f7ff1c83c5280p3@PAWR
2.82e-52FFCP PHASE1:Hg19::chr8:144815895..144815912,-#_5a8bb3f8ba5d599d34f9cf46a64adfc5p4@FAM83H
2.82e-52FFCP PHASE2:Hg19::chr8:144815895..144815912,-#_5a8bb3f8ba5d599d34f9cf46a64adfc5p4@FAM83H
7.56e-52FFCP PHASE2:Hg19::chr1:35246802..35246823,+#_e72a66c2d677709ab550f4364c5bbd56p1@GJB3
7.56e-52FFCP PHASE1:Hg19::chr1:35246802..35246823,+#_e72a66c2d677709ab550f4364c5bbd56p1@GJB3
1.08e-51FFCP PHASE1:Mm9::chr2:167904248..167904260,+#_8de8dcfb47d691695b68213348e7fa79p@chr2:167904248..167904260, +
1.08e-51FFCP PHASE2:Mm9::chr2:167904248..167904260,+#_8de8dcfb47d691695b68213348e7fa79p@chr2:167904248..167904260, +
1.74e-51FFCP PHASE1:Hg19::chr1:24127235..24127253,-#_817e2cf411579a70db262b48bbf5ccf9p1@GALE
1.74e-51FFCP PHASE2:Hg19::chr1:24127235..24127253,-#_817e2cf411579a70db262b48bbf5ccf9p1@GALE
1.86e-51FFCP PHASE1:Hg19::chr22:46933490..46933535,-#_dbf285db2aab3509ca0d0121fb02a303p1@CELSR1
1.86e-51FFCP PHASE2:Hg19::chr22:46933490..46933535,-#_dbf285db2aab3509ca0d0121fb02a303p1@CELSR1
3.79e-51FFCP PHASE1:Hg19::chr12:80084768..80084821,-#_f66a966d45e1d6af3d4590650b9ecfd4p2@PAWR
3.79e-51FFCP PHASE2:Hg19::chr12:80084768..80084821,-#_f66a966d45e1d6af3d4590650b9ecfd4p2@PAWR
4.19e-51FFCP PHASE2:Hg19::chr20:361506..361517,+#_0b2a8b1767d510df5e783a2e111849a9p4@TRIB3
4.19e-51FFCP PHASE1:Hg19::chr20:361506..361517,+#_0b2a8b1767d510df5e783a2e111849a9p4@TRIB3
5.4e-51FFCP PHASE1:Hg19::chr20:361478..361491,+#_33e97809d9d37928168333b59edae118p5@TRIB3
5.4e-51FFCP PHASE2:Hg19::chr20:361478..361491,+#_33e97809d9d37928168333b59edae118p5@TRIB3
1.19e-50FFCP PHASE1:Hg19::chr19:36001122..36001196,-#_71a0a005cca29b5f8be320369e9f15f5p6@DMKN
1.19e-50FFCP PHASE2:Hg19::chr19:36001122..36001196,-#_71a0a005cca29b5f8be320369e9f15f5p6@DMKN
1.51e-50FFCP PHASE1:Hg19::chr2:27975692..27975750,+#_839437b0b3fb1e1c6f8f3362256ca26ap@chr2:27975692..27975750, +
1.51e-50FFCP PHASE2:Hg19::chr2:27975692..27975750,+#_839437b0b3fb1e1c6f8f3362256ca26ap@chr2:27975692..27975750, +
1.65e-50FFCP PHASE2:Hg19::chr11:394196..394258,+#_133f9c5e398af2f1aca7b3970779cf88p1@PKP3
1.65e-50FFCP PHASE1:Hg19::chr11:394196..394258,+#_133f9c5e398af2f1aca7b3970779cf88p1@PKP3
3.48e-50FFCP PHASE1:Hg19::chr20:60942361..60942376,-#_04d452389a9c0b823e811ee1032e8b88p1@LAMA5
3.48e-50FFCP PHASE2:Hg19::chr20:60942361..60942376,-#_04d452389a9c0b823e811ee1032e8b88p1@LAMA5
6.26e-50FFCP PHASE2:Hg19::chr22:46373034..46373058,-#_38b347a05b4a556862e4a685284c2b75p1@WNT7B
6.26e-50FFCP PHASE1:Hg19::chr22:46373034..46373058,-#_38b347a05b4a556862e4a685284c2b75p1@WNT7B
6.63e-50FFCP PHASE2:Hg19::chr17:7284402..7284414,+#_746f33edee2f8da7c136242ceab2b471p1@TNK1
6.63e-50FFCP PHASE1:Hg19::chr17:7284402..7284414,+#_746f33edee2f8da7c136242ceab2b471p1@TNK1
7.47e-50FFCP PHASE1:Hg19::chr14:23451753..23451767,-#_f0c1f61c4d3122e2ece0dde3fd121526p2@AJUBA
7.47e-50FFCP PHASE2:Hg19::chr14:23451753..23451767,-#_f0c1f61c4d3122e2ece0dde3fd121526p2@AJUBA
2.33e-49FFCP PHASE1:Hg19::chr1:155100387..155100398,+#_831482b15b8501e52ef771614c7aea1cp3@EFNA1
2.33e-49FFCP PHASE2:Hg19::chr1:155100387..155100398,+#_831482b15b8501e52ef771614c7aea1cp3@EFNA1
2.38e-49FFCP PHASE2:Hg19::chr14:71275492..71275543,+#_6138d1897235c219007784e52bb71305p@chr14:71275492..71275543, +
2.38e-49FFCP PHASE1:Hg19::chr14:71275492..71275543,+#_6138d1897235c219007784e52bb71305p@chr14:71275492..71275543, +
2.92e-49FFCP PHASE1:Hg19::chr4:79472888..79472970,+#_346bbbafc54aa15c3e5e532706499401p1@ANXA3
2.92e-49FFCP PHASE2:Hg19::chr4:79472888..79472970,+#_346bbbafc54aa15c3e5e532706499401p1@ANXA3