Personal tools

CL:0000838

From FANTOM5_SSTAR

Jump to: navigation, search
Name:lymphoid lineage restricted progenitor cell
Namespace:FANTOM
Definition:"A progenitor cell restricted to the lymphoid lineage." [GOC:add, GOC:tfm]
Xrefs:
links:

BTO:0004731

FMA:70338
Synonyms: "lymphoid progenitor cell" BROAD []
Comments:Note that this is a class of cell types, not an identified single cell type.


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0002031(hematopoietic lineage restricted progenitor cell)
disjoint_from:CL:0000839(myeloid lineage restricted progenitor cell)



Children


is a:CL:0000825 (pro-NK cell),CL:0000826 (pro-B cell),CL:0000827 (pro-T cell)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.




Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000838 (lymphoid lineage restricted progenitor cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
3.81e-84FFCP PHASE1:Hg19::chr5:150521260..150521277,-#_11012cd08a06c2df6e51e83325059004p5@ANXA6
3.81e-84FFCP PHASE2:Hg19::chr5:150521260..150521277,-#_11012cd08a06c2df6e51e83325059004p5@ANXA6
2.59e-80FFCP PHASE2:Hg19::chr11:67206142..67206156,-#_09fc26915aa3305365a6ff3e398ca967p@chr11:67206142..67206156, -
2.59e-80FFCP PHASE1:Hg19::chr11:67206142..67206156,-#_09fc26915aa3305365a6ff3e398ca967p@chr11:67206142..67206156, -
2.5e-78FFCP PHASE1:Hg19::chr9:140356580..140356585,+#_9e22b2ee4ab683f49d3d45061feeebc9p@chr9:140356580..140356585, +
2.5e-78FFCP PHASE2:Hg19::chr9:140356580..140356585,+#_9e22b2ee4ab683f49d3d45061feeebc9p@chr9:140356580..140356585, +
5.72e-76FFCP PHASE1:Hg19::chr12:9822355..9822366,+#_d7fe76c25e25c58d0d190b3e40cd2c94p3@CLEC2D
5.72e-76FFCP PHASE2:Hg19::chr12:9822355..9822366,+#_d7fe76c25e25c58d0d190b3e40cd2c94p3@CLEC2D
2.33e-74FFCP PHASE2:Hg19::chr1:27953007..27953025,-#_04fbf9f13ae2cd246809447a061f8b19p12@FGR
2.33e-74FFCP PHASE1:Hg19::chr1:27953007..27953025,-#_04fbf9f13ae2cd246809447a061f8b19p12@FGR
3.52e-74FFCP PHASE1:Hg19::chr9:35650572..35650659,-#_33a5528b3b4be34bf609e99f48c8d366p2@SIT1
3.52e-74FFCP PHASE2:Hg19::chr9:35650572..35650659,-#_33a5528b3b4be34bf609e99f48c8d366p2@SIT1
8.62e-74FFCP PHASE2:Hg19::chr17:38020481..38020506,-#_fbc308d1c0de8e18558aac5e0a2f6c85p7@IKZF3
8.62e-74FFCP PHASE1:Hg19::chr17:38020481..38020506,-#_fbc308d1c0de8e18558aac5e0a2f6c85p7@IKZF3
2.43e-73FFCP PHASE1:Hg19::chr6:31540403..31540430,-#_d166ebaf6b83762a16457d3d57e57d1bp1@LOC100287329
2.43e-73FFCP PHASE2:Hg19::chr6:31540403..31540430,-#_d166ebaf6b83762a16457d3d57e57d1bp1@LOC100287329
5.96e-73FFCP PHASE1:Mm9::chr4:32335511..32335532,+#_3f2c9e4d1f61192d17723a6126190f4bp@chr4:32335511..32335532, +
5.96e-73FFCP PHASE2:Mm9::chr4:32335511..32335532,+#_3f2c9e4d1f61192d17723a6126190f4bp@chr4:32335511..32335532, +
6.05e-73FFCP PHASE1:Hg19::chr17:37934188..37934202,-#_1ca07968d6fcc9c3c770c798010c8febp8@IKZF3
6.05e-73FFCP PHASE2:Hg19::chr17:37934188..37934202,-#_1ca07968d6fcc9c3c770c798010c8febp8@IKZF3
7.04e-73FFCP PHASE2:Hg19::chr1:207096529..207096554,-#_f7f7e433b21786f823f74fb09a1f2c88p5@FAIM3
7.04e-73FFCP PHASE1:Hg19::chr1:207096529..207096554,-#_f7f7e433b21786f823f74fb09a1f2c88p5@FAIM3
7.63e-73FFCP PHASE1:Hg19::chr11:118754537..118754552,+#_df622601f8e6a014b7a702d3d9cc8516p3@CXCR5
7.63e-73FFCP PHASE2:Hg19::chr11:118754537..118754552,+#_df622601f8e6a014b7a702d3d9cc8516p3@CXCR5
1.47e-72FFCP PHASE2:Hg19::chr8:71564073..71564104,+#_aae2a24721752070a42d47bdd568e9f4p@chr8:71564073..71564104, +
1.47e-72FFCP PHASE1:Hg19::chr8:71564073..71564104,+#_aae2a24721752070a42d47bdd568e9f4p@chr8:71564073..71564104, +
3.17e-72FFCP PHASE2:Hg19::chr11:64107589..64107604,-#_5cbc29d3e8f5b2dd460beb4ded633f30p@chr11:64107589..64107604, -
3.17e-72FFCP PHASE1:Hg19::chr11:64107589..64107604,-#_5cbc29d3e8f5b2dd460beb4ded633f30p@chr11:64107589..64107604, -
3.62e-72FFCP PHASE1:Mm9::chr4:32422919..32422935,+#_626a323720b9db2b7fc1bdb4684ba784p@chr4:32422919..32422935, +
3.62e-72FFCP PHASE1:Mm9::chr5:123440486..123440504,-#_626a323720b9db2b7fc1bdb4684ba784p@chr5:123440486..123440504, -
3.62e-72FFCP PHASE1:Mm9::chr5:123440767..123440778,+#_626a323720b9db2b7fc1bdb4684ba784p@chr5:123440767..123440778, +
3.62e-72FFCP PHASE2:Mm9::chr4:32422919..32422935,+#_626a323720b9db2b7fc1bdb4684ba784p@chr4:32422919..32422935, +
3.62e-72FFCP PHASE2:Mm9::chr7:132751140..132751183,+#_626a323720b9db2b7fc1bdb4684ba784p@chr7:132751140..132751183, +
3.62e-72FFCP PHASE1:Mm9::chr6:99215016..99215036,+#_626a323720b9db2b7fc1bdb4684ba784p@chr6:99215016..99215036, +
3.62e-72FFCP PHASE2:Mm9::chr6:99215016..99215036,+#_626a323720b9db2b7fc1bdb4684ba784p@chr6:99215016..99215036, +
3.62e-72FFCP PHASE1:Mm9::chr7:132751140..132751183,+#_626a323720b9db2b7fc1bdb4684ba784p@chr7:132751140..132751183, +
3.62e-72FFCP PHASE2:Mm9::chr5:123440486..123440504,-#_626a323720b9db2b7fc1bdb4684ba784p@chr5:123440486..123440504, -
3.62e-72FFCP PHASE2:Mm9::chr5:123440767..123440778,+#_626a323720b9db2b7fc1bdb4684ba784p@chr5:123440767..123440778, +
1.77e-71FFCP PHASE1:Hg19::chr14:23000807..23000874,+#_a855506ab3eeca3abb7362050b62f127p1@TRAJ12
1.77e-71FFCP PHASE2:Hg19::chr14:23000807..23000874,+#_a855506ab3eeca3abb7362050b62f127p1@TRAJ12
5.08e-69FFCP PHASE2:Hg19::chr14:20811696..20811707,+#_da552bf11df0621927cc91dead7762d9p4@PARP2
5.08e-69FFCP PHASE1:Hg19::chr14:20811696..20811707,+#_da552bf11df0621927cc91dead7762d9p4@PARP2
9.05e-69FFCP PHASE1:Hg19::chr17:38020607..38020621,-#_d98f002b9364b8f849e820ad142b3609p9@IKZF3
9.05e-69FFCP PHASE2:Hg19::chr17:38020607..38020621,-#_d98f002b9364b8f849e820ad142b3609p9@IKZF3
1.3e-68FFCP PHASE2:Hg19::chr17:37934204..37934241,-#_8595d6f7129636307b1dabdacfc4fd5dp3@IKZF3
1.3e-68FFCP PHASE1:Hg19::chr17:37934204..37934241,-#_8595d6f7129636307b1dabdacfc4fd5dp3@IKZF3
3.96e-68FFCP PHASE2:Hg19::chr8:28747682..28747705,-#_3ead3f54d3d71ae64842d4d54a2931dcp2@INTS9
3.96e-68FFCP PHASE1:Hg19::chr8:28747682..28747705,-#_3ead3f54d3d71ae64842d4d54a2931dcp2@INTS9
8.17e-68FFCP PHASE1:Hg19::chr22:24823517..24823546,+#_38ee4a5c5617568906a5642eaac39056p5@ADORA2A
8.17e-68FFCP PHASE2:Hg19::chr22:24823517..24823546,+#_38ee4a5c5617568906a5642eaac39056p5@ADORA2A
8.38e-68FFCP PHASE2:Hg19::chr11:64107610..64107648,-#_2390dcfc8c9986a19d6819c355a688dap@chr11:64107610..64107648, -
8.38e-68FFCP PHASE1:Hg19::chr11:64107610..64107648,-#_2390dcfc8c9986a19d6819c355a688dap@chr11:64107610..64107648, -
1.26e-67FFCP PHASE1:Hg19::chr17:38020557..38020572,-#_337dcee9483e40c99a35db6e28c31e1dp4@IKZF3
1.26e-67FFCP PHASE2:Hg19::chr17:38020557..38020572,-#_337dcee9483e40c99a35db6e28c31e1dp4@IKZF3
1.62e-67FFCP PHASE1:Mm9::chr4:63522330..63522352,-#_dc7fec3e9e81474e9cfaa0fe06621e1bp4@Tnfsf8
1.62e-67FFCP PHASE2:Mm9::chr4:63522330..63522352,-#_dc7fec3e9e81474e9cfaa0fe06621e1bp4@Tnfsf8
1.94e-67FFCP PHASE2:Hg19::chr3:107844539..107844555,-#_b5289c57fd9cf7284fc3570aed2e54e4-, p@chr3:107844539..107844555
1.94e-67FFCP PHASE1:Hg19::chr3:107844539..107844555,-#_b5289c57fd9cf7284fc3570aed2e54e4p@chr3:107844539..107844555, -
2.01e-67FFCP PHASE1:Hg19::chr19:39108644..39108658,-#_1325aeb0dd52e678658c7233792fa977p2@MAP4K1
2.01e-67FFCP PHASE2:Hg19::chr19:39108644..39108658,-#_1325aeb0dd52e678658c7233792fa977p2@MAP4K1
4.33e-67FFCP PHASE2:Hg19::chr17:38020516..38020544,-#_9cecee08a1f88e9222bf9cf406eb577ap5@IKZF3
4.33e-67FFCP PHASE1:Hg19::chr17:38020516..38020544,-#_9cecee08a1f88e9222bf9cf406eb577ap5@IKZF3
4.95e-67FFCP PHASE1:Hg19::chr4:40198602..40198614,+#_64b139505628c978e2e204b02d0e04c2p3@RHOH
4.95e-67FFCP PHASE2:Hg19::chr4:40198602..40198614,+#_64b139505628c978e2e204b02d0e04c2p3@RHOH
8.92e-67FFCP PHASE2:Hg19::chr6:159528034..159528048,+#_8244e10f65916615b0354da4a5bfbe56p@chr6:159528034..159528048, +
8.92e-67FFCP PHASE1:Hg19::chr6:159528034..159528048,+#_8244e10f65916615b0354da4a5bfbe56p@chr6:159528034..159528048, +
1.45e-66FFCP PHASE1:Hg19::chr1:207096678..207096699,+#_777e9cb69932cc72ace4b813c124e808p@chr1:207096678..207096699, +
1.45e-66FFCP PHASE2:Hg19::chr1:207096678..207096699,+#_777e9cb69932cc72ace4b813c124e808p@chr1:207096678..207096699, +
1.69e-66FFCP PHASE2:Hg19::chr5:150521234..150521251,-#_b26cd4cbe8e504ee6392fd5593939930p4@ANXA6
1.69e-66FFCP PHASE1:Hg19::chr5:150521234..150521251,-#_b26cd4cbe8e504ee6392fd5593939930p4@ANXA6
3.58e-66FFCP PHASE2:Hg19::chr7:50348268..50348366,+#_b39bca1759c20fdd7964bfb17bee5c98p4@IKZF1
3.58e-66FFCP PHASE1:Hg19::chr7:50348268..50348366,+#_b39bca1759c20fdd7964bfb17bee5c98p4@IKZF1
3.67e-66FFCP PHASE1:Hg19::chr11:67203630..67203643,-#_ff9e6aa74846c0b00bdaa1bcb5508792p2@PTPRCAP
3.67e-66FFCP PHASE2:Hg19::chr11:67203630..67203643,-#_ff9e6aa74846c0b00bdaa1bcb5508792p2@PTPRCAP
5.16e-66FFCP PHASE2:Hg19::chr9:98257510..98257517,-#_cccd33da91511ca7f326413e87dd90eap@chr9:98257510..98257517, -
5.16e-66FFCP PHASE1:Hg19::chr9:98257510..98257517,-#_cccd33da91511ca7f326413e87dd90eap@chr9:98257510..98257517, -
6.69e-66FFCP PHASE1:Mm9::chr4:129252530..129252541,-#_de9caa7c087ed36b7d4b463bbe2ac2fbp@chr4:129252530..129252541, -
6.69e-66FFCP PHASE1:Mm9::chr5:123439299..123439324,+#_de9caa7c087ed36b7d4b463bbe2ac2fbp3@ENSMUST00000148466, p3@uc008zmw.1
6.69e-66FFCP PHASE1:Mm9::chr18:80806450..80806462,-#_de9caa7c087ed36b7d4b463bbe2ac2fbp@chr18:80806450..80806462, -
6.69e-66FFCP PHASE2:Mm9::chr4:129252530..129252541,-#_de9caa7c087ed36b7d4b463bbe2ac2fbp@chr4:129252530..129252541, -
6.69e-66FFCP PHASE2:Mm9::chr18:80806450..80806462,-#_de9caa7c087ed36b7d4b463bbe2ac2fbp@chr18:80806450..80806462, -
6.69e-66FFCP PHASE2:Mm9::chr5:123439299..123439324,+#_de9caa7c087ed36b7d4b463bbe2ac2fbp3@ENSMUST00000148466, p3@uc008zmw.1
7.82e-66FFCP PHASE2:Mm9::chr6:99045714..99045725,+#_9a4e302721b3fa259cce8fb832c424d4p@chr6:99045714..99045725, +
7.82e-66FFCP PHASE1:Mm9::chr6:99045714..99045725,+#_9a4e302721b3fa259cce8fb832c424d4p@chr6:99045714..99045725, +
1.07e-65FFCP PHASE2:Mm9::chr17:52301956..52301965,-#_cbe2ea8beff4b3bb0838975d5964a5a0p@chr17:52301956..52301965, -
1.07e-65FFCP PHASE1:Mm9::chr17:52301956..52301965,-#_cbe2ea8beff4b3bb0838975d5964a5a0p@chr17:52301956..52301965, -
1.42e-65FFCP PHASE2:Hg19::chr4:114683412..114683431,-#_ca2ed39fa9f86ee74bf22812183238a1p10@CAMK2D
1.42e-65FFCP PHASE1:Hg19::chr4:114683412..114683431,-#_ca2ed39fa9f86ee74bf22812183238a1p10@CAMK2D
1.75e-65FFCP PHASE1:Hg19::chr13:30951074..30951122,-#_dbf8c7b30f10110947f72536468e9654p1@LINC00426
1.75e-65FFCP PHASE2:Hg19::chr13:30951074..30951122,-#_dbf8c7b30f10110947f72536468e9654p1@LINC00426
2.3e-65FFCP PHASE2:Hg19::chr11:111224819..111224845,+#_6a061115a1ed17c2676c1c52a6330b63p2@CU689419
2.3e-65FFCP PHASE1:Hg19::chr11:111224819..111224845,+#_6a061115a1ed17c2676c1c52a6330b63p2@CU689419
2.93e-65FFCP PHASE2:Mm9::chr11:98801228..98801258,+#_0029812510a4bfa4ea1df259a3007d8ap@chr11:98801228..98801258, +
2.93e-65FFCP PHASE1:Mm9::chr11:98801228..98801258,+#_0029812510a4bfa4ea1df259a3007d8ap@chr11:98801228..98801258, +
4.68e-65FFCP PHASE2:Hg19::chr17:43487793..43487803,-#_526f4a73d118e89cded595732114c833p8@ARHGAP27
4.68e-65FFCP PHASE1:Hg19::chr17:43487793..43487803,-#_526f4a73d118e89cded595732114c833p8@ARHGAP27
5.33e-65FFCP PHASE2:Mm9::chr1:133101276..133101316,+#_b3c9e824001eb21e558866f3e50dfbdep@chr1:133101276..133101316, +
5.33e-65FFCP PHASE1:Mm9::chr11:11590836..11590851,+#_b3c9e824001eb21e558866f3e50dfbdep@chr11:11590836..11590851, +
5.33e-65FFCP PHASE2:Mm9::chr16:45223838..45223848,-#_b3c9e824001eb21e558866f3e50dfbdep@chr16:45223838..45223848, -
5.33e-65FFCP PHASE2:Mm9::chr19:10869146..10869168,-#_b3c9e824001eb21e558866f3e50dfbdep@chr19:10869146..10869168, -