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CL:0002327

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Name:mammary gland epithelial cell
Namespace:FANTOM
Definition:"An epithelial cell of the mammary gland." [GOC:tfm, PMID:19022771]
Xrefs:
links:
BTO:0004300
Synonyms: "breast epithelial cell" EXACT []
Created by:tmeehan
Creation date:2010-09-20T01:49:37Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000066(epithelial cell),CL:0002371(somatic cell)
part_of:UBERON:0001911(mammary gland)



Children


derives from:FF:0000088 (human mammary epithelial cell sample),FF:0101908 (MDA-MB-453 cell sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002327 (mammary gland epithelial cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.72e-89FFCP PHASE1:Hg19::chr12:122439564..122439597,+#_0f2aa49376e6cfd3c5802007e9f7d59bp4@WDR66
5.72e-89FFCP PHASE2:Hg19::chr12:122439564..122439597,+#_0f2aa49376e6cfd3c5802007e9f7d59bp4@WDR66
2.57e-88FFCP PHASE2:Hg19::chr19:15160255..15160260,+#_752277af3f453d3ebed72ce4d1812d2cp4@CASP14
2.57e-88FFCP PHASE1:Hg19::chr19:15160255..15160260,+#_752277af3f453d3ebed72ce4d1812d2cp4@CASP14
2.4e-66FFCP PHASE2:Hg19::chr3:101772894..101772897,+#_0c6ddfe467d1bb69e738375b899bd81ap@chr3:101772894..101772897, +
2.4e-66FFCP PHASE1:Hg19::chr3:101772894..101772897,+#_0c6ddfe467d1bb69e738375b899bd81ap@chr3:101772894..101772897, +
3.35e-66FFCP PHASE2:Hg19::chr17:8021710..8021722,-#_4fd9262532a8ce860194d921f1750a12p5@ALOXE3
3.35e-66FFCP PHASE1:Hg19::chr17:8021710..8021722,-#_4fd9262532a8ce860194d921f1750a12p5@ALOXE3
4.67e-66FFCP PHASE2:Hg19::chr20:49047228..49047236,-#_435bc25d49f3a4bcc2f5d4cd9184a083p@chr20:49047228..49047236, -
4.67e-66FFCP PHASE1:Hg19::chr20:49047228..49047236,-#_435bc25d49f3a4bcc2f5d4cd9184a083p@chr20:49047228..49047236, -
9.51e-64FFCP PHASE1:Hg19::chr3:114168260..114168264,+#_681337e9496f2ecd65d2c7176cb11323p@chr3:114168260..114168264, +
9.51e-64FFCP PHASE2:Hg19::chr3:114168260..114168264,+#_681337e9496f2ecd65d2c7176cb11323p@chr3:114168260..114168264, +
1.46e-63FFCP PHASE2:Hg19::chr2:69026957..69026966,+#_1d47102b0da2a62d8deab0033d2073afp@chr2:69026957..69026966, +
1.46e-63FFCP PHASE1:Hg19::chr2:69026957..69026966,+#_1d47102b0da2a62d8deab0033d2073afp@chr2:69026957..69026966, +
3.1e-50FFCP PHASE1:Hg19::chr1:236686445..236686452,+#_eedbea526b0293360d2cd21efb3e3319p18@LGALS8
3.1e-50FFCP PHASE1:Hg19::chr10:9107734..9107754,-#_eedbea526b0293360d2cd21efb3e3319p@chr10:9107734..9107754, -
3.1e-50FFCP PHASE1:Hg19::chr15:69857557..69857562,+#_eedbea526b0293360d2cd21efb3e3319p2@ENST00000559477
3.1e-50FFCP PHASE1:Hg19::chr1:164559541..164559546,+#_eedbea526b0293360d2cd21efb3e3319p52@PBX1
3.1e-50FFCP PHASE2:Hg19::chr3:4722283..4722286,+#_eedbea526b0293360d2cd21efb3e3319p@chr3:4722283..4722286, +
3.1e-50FFCP PHASE2:Hg19::chr3:169756667..169756675,+#_eedbea526b0293360d2cd21efb3e3319p14@GPR160
3.1e-50FFCP PHASE2:Hg19::chr20:34380919..34380924,+#_eedbea526b0293360d2cd21efb3e3319p@chr20:34380919..34380924, +
3.1e-50FFCP PHASE2:Hg19::chr10:37685495..37685497,+#_eedbea526b0293360d2cd21efb3e3319p@chr10:37685495..37685497, +
3.1e-50FFCP PHASE1:Hg19::chr6:50785279..50785289,+#_eedbea526b0293360d2cd21efb3e3319p@chr6:50785279..50785289, +
3.1e-50FFCP PHASE1:Hg19::chr3:169756638..169756645,+#_eedbea526b0293360d2cd21efb3e3319p15@GPR160
3.1e-50FFCP PHASE2:Hg19::chr1:236686445..236686452,+#_eedbea526b0293360d2cd21efb3e3319p18@LGALS8
3.1e-50FFCP PHASE1:Hg19::chr11:7618431..7618436,+#_eedbea526b0293360d2cd21efb3e3319p34@PPFIBP2
3.1e-50FFCP PHASE1:Hg19::chr8:30584524..30584529,-#_eedbea526b0293360d2cd21efb3e3319p14@GSR
3.1e-50FFCP PHASE2:Hg19::chr10:37451700..37451715,+#_eedbea526b0293360d2cd21efb3e3319+, p@chr10:37451700..37451715
3.1e-50FFCP PHASE1:Hg19::chr11:113212368..113212375,+#_eedbea526b0293360d2cd21efb3e3319p9@TTC12
3.1e-50FFCP PHASE1:Hg19::chr1:53559600..53559623,-#_eedbea526b0293360d2cd21efb3e3319p@chr1:53559600..53559623, -
3.1e-50FFCP PHASE2:Hg19::chr11:829495..829500,+#_eedbea526b0293360d2cd21efb3e3319p23@EFCAB4A
3.1e-50FFCP PHASE1:Hg19::chr1:190447673..190447683,-#_eedbea526b0293360d2cd21efb3e3319p@chr1:190447673..190447683, -
3.1e-50FFCP PHASE1:Hg19::chr10:37685495..37685497,+#_eedbea526b0293360d2cd21efb3e3319p@chr10:37685495..37685497, +
3.1e-50FFCP PHASE1:Hg19::chr7:42429373..42429374,-#_eedbea526b0293360d2cd21efb3e3319p@chr7:42429373..42429374, -
3.1e-50FFCP PHASE1:Hg19::chr7:94277045..94277057,-#_eedbea526b0293360d2cd21efb3e3319p@chr7:94277045..94277057, -
3.1e-50FFCP PHASE1:Hg19::chr9:117379097..117379106,+#_eedbea526b0293360d2cd21efb3e3319p3@AB528759
3.1e-50FFCP PHASE1:Hg19::chr10:37451700..37451715,+#_eedbea526b0293360d2cd21efb3e3319p@chr10:37451700..37451715, +
3.1e-50FFCP PHASE2:Hg19::chr8:58943437..58943442,+#_eedbea526b0293360d2cd21efb3e3319+, p@chr8:58943437..58943442
3.1e-50FFCP PHASE2:Hg19::chr1:53559544..53559570,-#_eedbea526b0293360d2cd21efb3e3319p@chr1:53559544..53559570, -
3.1e-50FFCP PHASE2:Hg19::chr21:43540892..43540907,+#_eedbea526b0293360d2cd21efb3e3319p4@UMODL1
3.1e-50FFCP PHASE2:Hg19::chr6:50785279..50785289,+#_eedbea526b0293360d2cd21efb3e3319p@chr6:50785279..50785289, +
3.1e-50FFCP PHASE2:Hg19::chrX:153603570..153603573,-#_eedbea526b0293360d2cd21efb3e3319-, p@chrX:153603570..153603573
3.1e-50FFCP PHASE1:Hg19::chr5:148231243..148231244,+#_eedbea526b0293360d2cd21efb3e3319p@chr5:148231243..148231244, +
3.1e-50FFCP PHASE2:Hg19::chr10:9107734..9107754,-#_eedbea526b0293360d2cd21efb3e3319p@chr10:9107734..9107754, -
3.1e-50FFCP PHASE2:Hg19::chr8:30584524..30584529,-#_eedbea526b0293360d2cd21efb3e3319p14@GSR
3.1e-50FFCP PHASE2:Hg19::chr10:37555579..37555584,+#_eedbea526b0293360d2cd21efb3e3319p@chr10:37555579..37555584, +
3.1e-50FFCP PHASE2:Hg19::chr14:46389767..46389768,+#_eedbea526b0293360d2cd21efb3e3319p@chr14:46389767..46389768, +
3.1e-50FFCP PHASE2:Hg19::chr7:42429365..42429366,-#_eedbea526b0293360d2cd21efb3e3319p@chr7:42429365..42429366, -
3.1e-50FFCP PHASE1:Hg19::chr16:48281411..48281419,-#_eedbea526b0293360d2cd21efb3e3319p5@ABCC11
3.1e-50FFCP PHASE2:Hg19::chr17:61514114..61514119,-#_eedbea526b0293360d2cd21efb3e3319p@chr17:61514114..61514119, -
3.1e-50FFCP PHASE1:Hg19::chr10:37555579..37555584,+#_eedbea526b0293360d2cd21efb3e3319p@chr10:37555579..37555584, +
3.1e-50FFCP PHASE2:Hg19::chr19:48010224..48010231,-#_eedbea526b0293360d2cd21efb3e3319p@chr19:48010224..48010231, -
3.1e-50FFCP PHASE1:Hg19::chrX:153603570..153603573,-#_eedbea526b0293360d2cd21efb3e3319p@chrX:153603570..153603573, -
3.1e-50FFCP PHASE2:Hg19::chr1:190447673..190447683,-#_eedbea526b0293360d2cd21efb3e3319p@chr1:190447673..190447683, -
3.1e-50FFCP PHASE1:Hg19::chr1:94080175..94080205,-#_eedbea526b0293360d2cd21efb3e3319p@chr1:94080175..94080205, -
3.1e-50FFCP PHASE1:Hg19::chr5:176514238..176514245,+#_eedbea526b0293360d2cd21efb3e3319p18@FGFR4
3.1e-50FFCP PHASE1:Hg19::chr17:61514208..61514213,-#_eedbea526b0293360d2cd21efb3e3319p@chr17:61514208..61514213, -
3.1e-50FFCP PHASE2:Hg19::chr11:113212368..113212375,+#_eedbea526b0293360d2cd21efb3e3319p9@TTC12
3.1e-50FFCP PHASE2:Hg19::chr5:148231243..148231244,+#_eedbea526b0293360d2cd21efb3e3319p@chr5:148231243..148231244, +
3.1e-50FFCP PHASE2:Hg19::chr1:94080175..94080205,-#_eedbea526b0293360d2cd21efb3e3319p@chr1:94080175..94080205, -
3.1e-50FFCP PHASE1:Hg19::chr3:169756667..169756675,+#_eedbea526b0293360d2cd21efb3e3319p14@GPR160
3.1e-50FFCP PHASE2:Hg19::chr15:69857557..69857562,+#_eedbea526b0293360d2cd21efb3e3319p2@ENST00000559477
3.1e-50FFCP PHASE2:Hg19::chr3:189438863..189438865,+#_eedbea526b0293360d2cd21efb3e3319p@chr3:189438863..189438865, +
3.1e-50FFCP PHASE2:Hg19::chr7:94277045..94277057,-#_eedbea526b0293360d2cd21efb3e3319p@chr7:94277045..94277057, -
3.1e-50FFCP PHASE1:Hg19::chr8:30584533..30584543,-#_eedbea526b0293360d2cd21efb3e3319p9@GSR
3.1e-50FFCP PHASE2:Hg19::chr19:11455900..11455910,+#_eedbea526b0293360d2cd21efb3e3319p@chr19:11455900..11455910, +
3.1e-50FFCP PHASE2:Hg19::chr10:37451725..37451728,+#_eedbea526b0293360d2cd21efb3e3319p@chr10:37451725..37451728, +
3.1e-50FFCP PHASE2:Hg19::chr11:67436996..67437009,-#_eedbea526b0293360d2cd21efb3e3319p@chr11:67436996..67437009, -
3.1e-50FFCP PHASE1:Hg19::chr19:11455900..11455910,+#_eedbea526b0293360d2cd21efb3e3319p@chr19:11455900..11455910, +
3.1e-50FFCP PHASE1:Hg19::chr20:34380919..34380924,+#_eedbea526b0293360d2cd21efb3e3319p@chr20:34380919..34380924, +
3.1e-50FFCP PHASE1:Hg19::chr7:42429377..42429382,-#_eedbea526b0293360d2cd21efb3e3319p@chr7:42429377..42429382, -
3.1e-50FFCP PHASE1:Hg19::chr21:43540870..43540878,+#_eedbea526b0293360d2cd21efb3e3319p10@UMODL1
3.1e-50FFCP PHASE2:Hg19::chr12:93806120..93806155,-#_eedbea526b0293360d2cd21efb3e3319p@chr12:93806120..93806155, -
3.1e-50FFCP PHASE2:Hg19::chr5:176514238..176514245,+#_eedbea526b0293360d2cd21efb3e3319p18@FGFR4
3.1e-50FFCP PHASE1:Hg19::chr2:142889081..142889086,-#_eedbea526b0293360d2cd21efb3e3319p11@LRP1B
3.1e-50FFCP PHASE1:Hg19::chr10:37451725..37451728,+#_eedbea526b0293360d2cd21efb3e3319p@chr10:37451725..37451728, +
3.1e-50FFCP PHASE1:Hg19::chr3:4722283..4722286,+#_eedbea526b0293360d2cd21efb3e3319p@chr3:4722283..4722286, +
3.1e-50FFCP PHASE2:Hg19::chr4:160605585..160605628,-#_eedbea526b0293360d2cd21efb3e3319p@chr4:160605585..160605628, -
3.1e-50FFCP PHASE2:Hg19::chr1:53559600..53559623,-#_eedbea526b0293360d2cd21efb3e3319p@chr1:53559600..53559623, -
3.1e-50FFCP PHASE2:Hg19::chr21:43540912..43540915,+#_eedbea526b0293360d2cd21efb3e3319p15@UMODL1
3.1e-50FFCP PHASE2:Hg19::chr8:30584533..30584543,-#_eedbea526b0293360d2cd21efb3e3319p9@GSR
3.1e-50FFCP PHASE1:Hg19::chr11:829495..829500,+#_eedbea526b0293360d2cd21efb3e3319p23@EFCAB4A
3.1e-50FFCP PHASE2:Hg19::chr20:31781321..31781329,+#_eedbea526b0293360d2cd21efb3e3319p2@BPIFA4P
3.1e-50FFCP PHASE2:Hg19::chr10:37637623..37637627,+#_eedbea526b0293360d2cd21efb3e3319p1@VN1R53P
3.1e-50FFCP PHASE2:Hg19::chr7:42429373..42429374,-#_eedbea526b0293360d2cd21efb3e3319p@chr7:42429373..42429374, -
3.1e-50FFCP PHASE1:Hg19::chr1:47366146..47366153,-#_eedbea526b0293360d2cd21efb3e3319p1@CYP4Z2P
3.1e-50FFCP PHASE2:Hg19::chr11:828104..828109,+#_eedbea526b0293360d2cd21efb3e3319p32@EFCAB4A
3.1e-50FFCP PHASE1:Hg19::chr1:189493099..189493102,-#_eedbea526b0293360d2cd21efb3e3319p@chr1:189493099..189493102, -
3.1e-50FFCP PHASE1:Hg19::chr2:149863976..149863986,+#_eedbea526b0293360d2cd21efb3e3319p@chr2:149863976..149863986, +
3.1e-50FFCP PHASE1:Hg19::chr10:37637623..37637627,+#_eedbea526b0293360d2cd21efb3e3319p1@VN1R53P
3.1e-50FFCP PHASE1:Hg19::chr14:46389767..46389768,+#_eedbea526b0293360d2cd21efb3e3319p@chr14:46389767..46389768, +
3.1e-50FFCP PHASE1:Hg19::chr4:160605585..160605628,-#_eedbea526b0293360d2cd21efb3e3319p@chr4:160605585..160605628, -
3.1e-50FFCP PHASE2:Hg19::chr1:164559541..164559546,+#_eedbea526b0293360d2cd21efb3e3319p52@PBX1
3.1e-50FFCP PHASE2:Hg19::chr17:61514163..61514170,-#_eedbea526b0293360d2cd21efb3e3319p@chr17:61514163..61514170, -
3.1e-50FFCP PHASE1:Hg19::chr5:176518002..176518011,+#_eedbea526b0293360d2cd21efb3e3319p19@FGFR4
3.1e-50FFCP PHASE1:Hg19::chr21:43540892..43540907,+#_eedbea526b0293360d2cd21efb3e3319p4@UMODL1
3.1e-50FFCP PHASE1:Hg19::chr8:58943437..58943442,+#_eedbea526b0293360d2cd21efb3e3319p@chr8:58943437..58943442, +
3.1e-50FFCP PHASE1:Hg19::chr15:69857515..69857518,+#_eedbea526b0293360d2cd21efb3e3319p3@ENST00000559477
3.1e-50FFCP PHASE2:Hg19::chr5:176518002..176518011,+#_eedbea526b0293360d2cd21efb3e3319p19@FGFR4
3.1e-50FFCP PHASE2:Hg19::chr1:189493099..189493102,-#_eedbea526b0293360d2cd21efb3e3319p@chr1:189493099..189493102, -