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DOID:3093

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Name:nervous system cancer
Namespace:FANTOM
Definition:"An organ system cancer located_in the nervous sytem that affects the central or peripheral nervous system." [url:http://emedicine.medscape.com/oncology, url:http://en.wikipedia.org/wiki/Nervous_system_disease]
Xrefs:
links:

MSH:D009380
SNOMEDCT_2010_1_31:188306000
UMLS_CUI:C0027665
UMLS_CUI:C0153643

UMLS_CUI:C1334956
Synonyms: "malignant neoplasm of nervous system" EXACT []
"neoplasm of nervous system (disorder)" EXACT [SNOMEDCT_2005_07_31:126950007]
"nervous system neoplasm" EXACT [CSP2005:2012-5157]
"neural neoplasm" EXACT []
"neural tumor" EXACT [NCI2004_11_17:C35562]
"tumor of the nervous system" EXACT [NCI2004_11_17:C3268]
Alt_id: DOID:1193
DOID:3195
DOID:4695

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:0050686(organ system cancer)



Children


is a:DOID:0060116 (sensory system cancer),DOID:1192 (peripheral nervous system neoplasm),DOID:3620 (central nervous system cancer)


Ontology Tree: Loaded from BioPortal

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3093 (nervous system cancer), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.59e-50FFCP PHASE1:Hg19::chr15:36653779..36653789,-#_621b95e2aa6d0e3ab8a57a7eb86f4f0cp@chr15:36653779..36653789, -
5.59e-50FFCP PHASE2:Hg19::chr15:36653779..36653789,-#_621b95e2aa6d0e3ab8a57a7eb86f4f0cp@chr15:36653779..36653789, -
2.27e-44FFCP PHASE2:Hg19::chr7:3284005..3284016,-#_81e229f4ee7d37f6d129b14cdb1afc71p@chr7:3284005..3284016, -
2.27e-44FFCP PHASE1:Hg19::chr7:3284005..3284016,-#_81e229f4ee7d37f6d129b14cdb1afc71p@chr7:3284005..3284016, -
5.98e-34FFCP PHASE1:Hg19::chr18:39766598..39766611,+#_92a5e8f62c80dbda07a388cb0774a743p2@uc002las.1, p2@uc002lat.2, p2@uc002lau.2
5.98e-34FFCP PHASE1:Hg19::chr3:130648803..130648811,-#_92a5e8f62c80dbda07a388cb0774a743p2@ENST00000504737
5.98e-34FFCP PHASE1:Hg19::chr10:54329422..54329434,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:54329422..54329434, -
5.98e-34FFCP PHASE1:Hg19::chr18:70417646..70417651,-#_92a5e8f62c80dbda07a388cb0774a743p@chr18:70417646..70417651, -
5.98e-34FFCP PHASE2:Hg19::chr10:54329447..54329454,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:54329447..54329454, -
5.98e-34FFCP PHASE2:Hg19::chr5:24160807..24160831,-#_92a5e8f62c80dbda07a388cb0774a743p@chr5:24160807..24160831, -
5.98e-34FFCP PHASE1:Hg19::chr4:39344493..39344497,-#_92a5e8f62c80dbda07a388cb0774a743p@chr4:39344493..39344497, -
5.98e-34FFCP PHASE2:Hg19::chr10:28530804..28530813,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:28530804..28530813, -
5.98e-34FFCP PHASE2:Hg19::chr10:28491892..28491902,-#_92a5e8f62c80dbda07a388cb0774a743p7@MPP7
5.98e-34FFCP PHASE1:Hg19::chr10:28509539..28509568,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:28509539..28509568, -
5.98e-34FFCP PHASE1:Hg19::chr5:103248950..103248994,+#_92a5e8f62c80dbda07a388cb0774a743p@chr5:103248950..103248994, +
5.98e-34FFCP PHASE2:Hg19::chr4:39344555..39344565,-#_92a5e8f62c80dbda07a388cb0774a743p@chr4:39344555..39344565, -
5.98e-34FFCP PHASE2:Hg19::chr1:198636194..198636203,-#_92a5e8f62c80dbda07a388cb0774a743p4@ENST00000413577
5.98e-34FFCP PHASE2:Hg19::chr21:26714477..26714509,+#_92a5e8f62c80dbda07a388cb0774a743p@chr21:26714477..26714509, +
5.98e-34FFCP PHASE2:Hg19::chr18:38446239..38446249,-#_92a5e8f62c80dbda07a388cb0774a743p@chr18:38446239..38446249, -
5.98e-34FFCP PHASE2:Hg19::chrY:3781821..3781829,-#_92a5e8f62c80dbda07a388cb0774a743p@chrY:3781821..3781829, -
5.98e-34FFCP PHASE2:Hg19::chr18:70417551..70417561,-#_92a5e8f62c80dbda07a388cb0774a743p@chr18:70417551..70417561, -
5.98e-34FFCP PHASE1:Hg19::chr18:38446239..38446249,-#_92a5e8f62c80dbda07a388cb0774a743p@chr18:38446239..38446249, -
5.98e-34FFCP PHASE2:Hg19::chr10:54329319..54329326,-#_92a5e8f62c80dbda07a388cb0774a743-, p@chr10:54329319..54329326
5.98e-34FFCP PHASE2:Hg19::chr10:28030013..28030015,+#_92a5e8f62c80dbda07a388cb0774a743p@chr10:28030013..28030015, +
5.98e-34FFCP PHASE2:Hg19::chr4:176729849..176729872,+#_92a5e8f62c80dbda07a388cb0774a743p@chr4:176729849..176729872, +
5.98e-34FFCP PHASE2:Hg19::chr10:28509658..28509676,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:28509658..28509676, -
5.98e-34FFCP PHASE1:Hg19::chr10:28527860..28527872,-#_92a5e8f62c80dbda07a388cb0774a743p9@MPP7
5.98e-34FFCP PHASE1:Hg19::chr10:28488010..28488022,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:28488010..28488022, -
5.98e-34FFCP PHASE1:Hg19::chr7:69819605..69819617,+#_92a5e8f62c80dbda07a388cb0774a743p@chr7:69819605..69819617, +
5.98e-34FFCP PHASE1:Hg19::chr10:54329447..54329454,-#_92a5e8f62c80dbda07a388cb0774a743-, p@chr10:54329447..54329454
5.98e-34FFCP PHASE1:Hg19::chr18:70417659..70417666,-#_92a5e8f62c80dbda07a388cb0774a743p@chr18:70417659..70417666, -
5.98e-34FFCP PHASE1:Hg19::chrY:3781821..3781829,-#_92a5e8f62c80dbda07a388cb0774a743p@chrY:3781821..3781829, -
5.98e-34FFCP PHASE2:Hg19::chr5:103227130..103227137,-#_92a5e8f62c80dbda07a388cb0774a743p@chr5:103227130..103227137, -
5.98e-34FFCP PHASE1:Hg19::chr4:39344546..39344551,-#_92a5e8f62c80dbda07a388cb0774a743p@chr4:39344546..39344551, -
5.98e-34FFCP PHASE2:Hg19::chr10:28530831..28530841,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:28530831..28530841, -
5.98e-34FFCP PHASE1:Hg19::chr5:24160807..24160831,-#_92a5e8f62c80dbda07a388cb0774a743p@chr5:24160807..24160831, -
5.98e-34FFCP PHASE1:Hg19::chr10:28509632..28509637,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:28509632..28509637, -
5.98e-34FFCP PHASE2:Hg19::chr18:70417646..70417651,-#_92a5e8f62c80dbda07a388cb0774a743p@chr18:70417646..70417651, -
5.98e-34FFCP PHASE1:Hg19::chr10:54329319..54329326,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:54329319..54329326, -
5.98e-34FFCP PHASE1:Hg19::chr18:70417486..70417495,-#_92a5e8f62c80dbda07a388cb0774a743p@chr18:70417486..70417495, -
5.98e-34FFCP PHASE2:Hg19::chr10:54329365..54329373,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:54329365..54329373, -
5.98e-34FFCP PHASE1:Hg19::chr4:176749234..176749238,+#_92a5e8f62c80dbda07a388cb0774a743p@chr4:176749234..176749238, +
5.98e-34FFCP PHASE1:Hg19::chr10:28530804..28530813,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:28530804..28530813, -
5.98e-34FFCP PHASE1:Hg19::chr10:28491892..28491902,-#_92a5e8f62c80dbda07a388cb0774a743p7@MPP7
5.98e-34FFCP PHASE1:Hg19::chr21:26714477..26714509,+#_92a5e8f62c80dbda07a388cb0774a743p@chr21:26714477..26714509, +
5.98e-34FFCP PHASE1:Hg19::chr18:70423377..70423388,-#_92a5e8f62c80dbda07a388cb0774a743p@chr18:70423377..70423388, -
5.98e-34FFCP PHASE2:Hg19::chr5:103227146..103227159,-#_92a5e8f62c80dbda07a388cb0774a743p@chr5:103227146..103227159, -
5.98e-34FFCP PHASE1:Hg19::chr4:39344555..39344565,-#_92a5e8f62c80dbda07a388cb0774a743p@chr4:39344555..39344565, -
5.98e-34FFCP PHASE1:Hg19::chr10:28030013..28030015,+#_92a5e8f62c80dbda07a388cb0774a743p@chr10:28030013..28030015, +
5.98e-34FFCP PHASE1:Hg19::chr10:28509658..28509676,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:28509658..28509676, -
5.98e-34FFCP PHASE2:Hg19::chr18:38529571..38529575,+#_92a5e8f62c80dbda07a388cb0774a743p@chr18:38529571..38529575, +
5.98e-34FFCP PHASE2:Hg19::chr18:70417659..70417666,-#_92a5e8f62c80dbda07a388cb0774a743p@chr18:70417659..70417666, -
5.98e-34FFCP PHASE1:Hg19::chr18:38529571..38529575,+#_92a5e8f62c80dbda07a388cb0774a743p@chr18:38529571..38529575, +
5.98e-34FFCP PHASE1:Hg19::chr10:54329365..54329373,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:54329365..54329373, -
5.98e-34FFCP PHASE2:Hg19::chr10:54329394..54329397,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:54329394..54329397, -
5.98e-34FFCP PHASE1:Hg19::chr4:176749383..176749408,+#_92a5e8f62c80dbda07a388cb0774a743p@chr4:176749383..176749408, +
5.98e-34FFCP PHASE2:Hg19::chr10:28033640..28033643,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:28033640..28033643, -
5.98e-34FFCP PHASE2:Hg19::chr10:28527477..28527523,+#_92a5e8f62c80dbda07a388cb0774a743p@chr10:28527477..28527523, +
5.98e-34FFCP PHASE1:Hg19::chr10:28530831..28530841,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:28530831..28530841, -
5.98e-34FFCP PHASE1:Hg19::chr5:103227130..103227137,-#_92a5e8f62c80dbda07a388cb0774a743-, p@chr5:103227130..103227137
5.98e-34FFCP PHASE2:Hg19::chr4:39344493..39344497,-#_92a5e8f62c80dbda07a388cb0774a743-, p@chr4:39344493..39344497
5.98e-34FFCP PHASE2:Hg19::chr18:39739175..39739186,+#_92a5e8f62c80dbda07a388cb0774a743p@chr18:39739175..39739186, +
5.98e-34FFCP PHASE2:Hg19::chr4:176749234..176749238,+#_92a5e8f62c80dbda07a388cb0774a743p@chr4:176749234..176749238, +
5.98e-34FFCP PHASE1:Hg19::chr18:39739175..39739186,+#_92a5e8f62c80dbda07a388cb0774a743p@chr18:39739175..39739186, +
5.98e-34FFCP PHASE2:Hg19::chr18:70417486..70417495,-#_92a5e8f62c80dbda07a388cb0774a743p@chr18:70417486..70417495, -
5.98e-34FFCP PHASE2:Hg19::chr5:103248950..103248994,+#_92a5e8f62c80dbda07a388cb0774a743+, p@chr5:103248950..103248994
5.98e-34FFCP PHASE1:Hg19::chr4:176729849..176729872,+#_92a5e8f62c80dbda07a388cb0774a743p@chr4:176729849..176729872, +
5.98e-34FFCP PHASE2:Hg19::chr10:28509539..28509568,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:28509539..28509568, -
5.98e-34FFCP PHASE2:Hg19::chr18:39041105..39041117,-#_92a5e8f62c80dbda07a388cb0774a743p@chr18:39041105..39041117, -
5.98e-34FFCP PHASE2:Hg19::chr18:70423377..70423388,-#_92a5e8f62c80dbda07a388cb0774a743p@chr18:70423377..70423388, -
5.98e-34FFCP PHASE2:Hg19::chr3:130648803..130648811,-#_92a5e8f62c80dbda07a388cb0774a743p2@ENST00000504737
5.98e-34FFCP PHASE1:Hg19::chr18:39041105..39041117,-#_92a5e8f62c80dbda07a388cb0774a743-, p@chr18:39041105..39041117
5.98e-34FFCP PHASE1:Hg19::chr10:54329394..54329397,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:54329394..54329397, -
5.98e-34FFCP PHASE1:Hg19::chr18:70417551..70417561,-#_92a5e8f62c80dbda07a388cb0774a743p@chr18:70417551..70417561, -
5.98e-34FFCP PHASE2:Hg19::chr10:54329422..54329434,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:54329422..54329434, -
5.98e-34FFCP PHASE1:Hg19::chr1:198636194..198636203,-#_92a5e8f62c80dbda07a388cb0774a743p4@ENST00000413577
5.98e-34FFCP PHASE2:Hg19::chr10:28527860..28527872,-#_92a5e8f62c80dbda07a388cb0774a743p9@MPP7
5.98e-34FFCP PHASE2:Hg19::chr10:28488010..28488022,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:28488010..28488022, -
5.98e-34FFCP PHASE1:Hg19::chr5:103227146..103227159,-#_92a5e8f62c80dbda07a388cb0774a743p@chr5:103227146..103227159, -
5.98e-34FFCP PHASE2:Hg19::chr4:39344546..39344551,-#_92a5e8f62c80dbda07a388cb0774a743p@chr4:39344546..39344551, -
5.98e-34FFCP PHASE2:Hg19::chr18:39739223..39739238,+#_92a5e8f62c80dbda07a388cb0774a743p@chr18:39739223..39739238, +
5.98e-34FFCP PHASE2:Hg19::chr4:176749383..176749408,+#_92a5e8f62c80dbda07a388cb0774a743p@chr4:176749383..176749408, +
5.98e-34FFCP PHASE1:Hg19::chr18:39739223..39739238,+#_92a5e8f62c80dbda07a388cb0774a743p@chr18:39739223..39739238, +
5.98e-34FFCP PHASE1:Hg19::chr10:28033640..28033643,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:28033640..28033643, -
5.98e-34FFCP PHASE2:Hg19::chr10:28509632..28509637,-#_92a5e8f62c80dbda07a388cb0774a743p@chr10:28509632..28509637, -
5.98e-34FFCP PHASE1:Hg19::chr10:28527477..28527523,+#_92a5e8f62c80dbda07a388cb0774a743p@chr10:28527477..28527523, +
5.98e-34FFCP PHASE2:Hg19::chr7:69819605..69819617,+#_92a5e8f62c80dbda07a388cb0774a743p@chr7:69819605..69819617, +
5.98e-34FFCP PHASE2:Hg19::chr18:39766598..39766611,+#_92a5e8f62c80dbda07a388cb0774a743p2@uc002las.1, p2@uc002lat.2, p2@uc002lau.2
2.01e-30FFCP PHASE1:Hg19::chr10:28367310..28367318,+#_d0adcd01f0bc12fb7c706b1d5605579dp@chr10:28367310..28367318, +
2.01e-30FFCP PHASE2:Hg19::chr10:28367310..28367318,+#_d0adcd01f0bc12fb7c706b1d5605579dp@chr10:28367310..28367318, +
2.22e-30FFCP PHASE1:Hg19::chr11:103489520..103489526,+#_e4e595f22cb7ecccf1f43588711ab6f9p@chr11:103489520..103489526, +
2.22e-30FFCP PHASE2:Hg19::chr11:103489520..103489526,+#_e4e595f22cb7ecccf1f43588711ab6f9p@chr11:103489520..103489526, +
6.82e-30FFCP PHASE1:Hg19::chr17:13444894..13444917,+#_57356e76c963553487a9b50758fe739fp@chr17:13444894..13444917, +
6.82e-30FFCP PHASE2:Hg19::chr17:13444894..13444917,+#_57356e76c963553487a9b50758fe739fp@chr17:13444894..13444917, +
1.06e-29FFCP PHASE2:Hg19::chr20:4450781..4450802,-#_5e7cf8cd38acfd6387f8e018d6cd4f25-, p@chr20:4450781..4450802
1.06e-29FFCP PHASE1:Hg19::chr20:4450781..4450802,-#_5e7cf8cd38acfd6387f8e018d6cd4f25p@chr20:4450781..4450802, -
1.66e-25FFCP PHASE2:Hg19::chr15:36653709..36653720,-#_8f641385210b6f31092fdcf2c8e9f56ep@chr15:36653709..36653720, -
1.66e-25FFCP PHASE1:Hg19::chr15:36653709..36653720,-#_8f641385210b6f31092fdcf2c8e9f56ep@chr15:36653709..36653720, -
1.81e-25FFCP PHASE2:Hg19::chr10:28367270..28367278,+#_8e9da5ef5308dbac264dd3fa1e7f9d4ep@chr10:28367270..28367278, +
1.81e-25FFCP PHASE1:Hg19::chr10:28367270..28367278,+#_8e9da5ef5308dbac264dd3fa1e7f9d4ep@chr10:28367270..28367278, +