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UBERON:0002067

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Name:dermis
Namespace:FANTOM
Definition:"The dermis is a layer of skin between the epidermis (with which it makes up the skin) and subcutaneous tissues, and is composed of two layers, the papillary and reticular dermis[WP]." [Wikipedia:Dermis, ZFIN:curator]
Xrefs:
links:

AAO:0000128
BTO:0000294
EFO:0000953
EV:0100154
FMA:70323
GAID:1321
[1]
MA:0000152
MAT:0000153
MESH:A.17.815.180
MIAA:0000153
ncithesaurus:Dermis
SCTID:361696001
TAO:0001119
VHOG:0000108
XAO:0000217

ZFA:0001119
Synonyms: "corium" RELATED [BTO:0000294]
"cutis" RELATED [BTO:0000294]
"dermis; corium" RELATED LATIN [Wikipedia:Dermis]
"vertebrate dermis" EXACT []
Comments:Editor notes: Consider adding a layer-of-skin grouping class for all skin layers
Alt_id: UBERON:FMA_70323-MA_0000152-MIAA_0000153-XAO_0000217-ZFA_0001119
Subset: uberon_slim
vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0004120(mesoderm-derived structure),UBERON:0004121(ectoderm-derived structure),UBERON:0010314(structure with developmental contribution from neural crest),UBERON:0013754(integumentary system layer)
develops_from:UBERON:0004016(dermatome),UBERON:0010083(future dermis)
part_of:UBERON:0002097(skin of body)



Children

develops from:UBERON:0004756 (dermal skeletal element)
part of:UBERON:0001992 (papillary layer of dermis),CL:0002551 (fibroblast of dermis)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002067 (dermis), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.31e-68FFCP PHASE2:Hg19::chr1:45087872..45087892,+#_73a5fe415b7ca65484bdfc742826348dp@chr1:45087872..45087892, +
1.31e-68FFCP PHASE1:Hg19::chr1:45087872..45087892,+#_73a5fe415b7ca65484bdfc742826348dp@chr1:45087872..45087892, +
9.25e-50FFCP PHASE1:Hg19::chr7:107707083..107707099,-#_83d7fbf3a7befa7de290a45886be4910p@chr7:107707083..107707099, -
9.25e-50FFCP PHASE2:Hg19::chr7:107707064..107707079,-#_83d7fbf3a7befa7de290a45886be4910p@chr7:107707064..107707079, -
9.25e-50FFCP PHASE1:Hg19::chr7:107707064..107707079,-#_83d7fbf3a7befa7de290a45886be4910p@chr7:107707064..107707079, -
9.25e-50FFCP PHASE2:Hg19::chr7:107707083..107707099,-#_83d7fbf3a7befa7de290a45886be4910p@chr7:107707083..107707099, -
9.89e-40FFCP PHASE1:Hg19::chr10:124254447..124254458,-#_70b5dd352ade128910bdd82040833306p@chr10:124254447..124254458, -
9.89e-40FFCP PHASE2:Hg19::chr10:124254447..124254458,-#_70b5dd352ade128910bdd82040833306p@chr10:124254447..124254458, -
1.21e-39FFCP PHASE1:Hg19::chr1:10228206..10228218,+#_474993e40a080f515fefa529e8cce632p@chr1:10228206..10228218, +
1.21e-39FFCP PHASE2:Hg19::chr1:10228206..10228218,+#_474993e40a080f515fefa529e8cce632+, p@chr1:10228206..10228218
5.08e-38FFCP PHASE1:Hg19::chr6:5498703..5498727,+#_3f9a54ca105947556fa5031d3b942884p@chr6:5498703..5498727, +
5.08e-38FFCP PHASE2:Hg19::chr6:5498703..5498727,+#_3f9a54ca105947556fa5031d3b942884p@chr6:5498703..5498727, +
2.83e-35FFCP PHASE1:Hg19::chr8:128387795..128387801,+#_86141da7369306346e1d7fcfad6e08f6+, p@chr8:128387795..128387801
2.83e-35FFCP PHASE2:Hg19::chr8:128387795..128387801,+#_86141da7369306346e1d7fcfad6e08f6p@chr8:128387795..128387801, +
1.55e-33FFCP PHASE2:Hg19::chr1:45088343..45088354,+#_7bd56040ab10bf8a0e52e3ed8f20d8cap@chr1:45088343..45088354, +
1.55e-33FFCP PHASE1:Hg19::chr1:45088343..45088354,+#_7bd56040ab10bf8a0e52e3ed8f20d8cap@chr1:45088343..45088354, +
5.64e-29FFCP PHASE2:Hg19::chr7:98258032..98258045,+#_610f64bf5c24b08515d2c07ef60c9fe5p@chr7:98258032..98258045, +
5.64e-29FFCP PHASE1:Hg19::chr7:98258032..98258045,+#_610f64bf5c24b08515d2c07ef60c9fe5p@chr7:98258032..98258045, +
7.57e-28FFCP PHASE2:Hg19::chr10:31071229..31071236,+#_046bda63a381043f46a7064c56d8bb9b+, p@chr10:31071229..31071236
7.57e-28FFCP PHASE1:Hg19::chr10:31071229..31071236,+#_046bda63a381043f46a7064c56d8bb9bp@chr10:31071229..31071236, +
1.12e-26FFCP PHASE2:Hg19::chr5:33794920..33794939,-#_9a62e126fea2d1795cb0c0c25f092ca9p@chr5:33794920..33794939, -
1.12e-26FFCP PHASE1:Hg19::chr5:33794920..33794939,-#_9a62e126fea2d1795cb0c0c25f092ca9p@chr5:33794920..33794939, -
1.47e-26FFCP PHASE2:Hg19::chr21:47405899..47405911,+#_497ee5b4c828ab5bbf65f00766dc5c2ep@chr21:47405899..47405911, +
1.47e-26FFCP PHASE1:Hg19::chr21:47405899..47405911,+#_497ee5b4c828ab5bbf65f00766dc5c2ep@chr21:47405899..47405911, +
1.5e-25FFCP PHASE1:Hg19::chr4:89454373..89454379,-#_ff89e28a3d6aea3b34c0121975f4f106p@chr4:89454373..89454379, -
1.5e-25FFCP PHASE2:Hg19::chr4:89454373..89454379,-#_ff89e28a3d6aea3b34c0121975f4f106p@chr4:89454373..89454379, -
1.5e-25FFCP PHASE1:Hg19::chr17:38174999..38175001,+#_ff89e28a3d6aea3b34c0121975f4f106p8@CASC3
1.5e-25FFCP PHASE2:Hg19::chr17:38174999..38175001,+#_ff89e28a3d6aea3b34c0121975f4f106p8@CASC3
2.99e-25FFCP PHASE1:Hg19::chr8:141656896..141656918,-#_8aaa078761cdfb0bca575125dab819fcp@chr8:141656896..141656918, -
2.99e-25FFCP PHASE2:Hg19::chr8:141656896..141656918,-#_8aaa078761cdfb0bca575125dab819fcp@chr8:141656896..141656918, -
3.17e-25FFCP PHASE2:Hg19::chr2:95983133..95983144,+#_734ddac16dfeb01d14d15eef209df0c1p@chr2:95983133..95983144, +
3.17e-25FFCP PHASE1:Hg19::chr2:95983133..95983144,+#_734ddac16dfeb01d14d15eef209df0c1p@chr2:95983133..95983144, +
2.03e-24FFCP PHASE1:Hg19::chr5:33794876..33794902,-#_a3e8e64e44620fb712c82f98eb4fbb82p@chr5:33794876..33794902, -
2.03e-24FFCP PHASE2:Hg19::chr5:33794876..33794902,-#_a3e8e64e44620fb712c82f98eb4fbb82p@chr5:33794876..33794902, -
2.4e-24FFCP PHASE1:Hg19::chr5:174252830..174252847,+#_3961e80021c6c4ac3b3475561ae8c38fp@chr5:174252830..174252847, +
2.4e-24FFCP PHASE2:Hg19::chr5:174252830..174252847,+#_3961e80021c6c4ac3b3475561ae8c38fp@chr5:174252830..174252847, +
2.92e-24FFCP PHASE2:Hg19::chr4:127699583..127699608,-#_b1213e2ceb0b12210879ddf8bef5caebp@chr4:127699583..127699608, -
2.92e-24FFCP PHASE1:Hg19::chr4:127699583..127699608,-#_b1213e2ceb0b12210879ddf8bef5caebp@chr4:127699583..127699608, -
1.68e-23FFCP PHASE2:Hg19::chr4:127876558..127876592,-#_bc534413383b7379f99a99a8fb3c328cp1@ENST00000515428
1.68e-23FFCP PHASE1:Hg19::chr4:127876558..127876592,-#_bc534413383b7379f99a99a8fb3c328cp1@ENST00000515428
2.62e-23FFCP PHASE2:Hg19::chr7:127963997..127964004,-#_99be5715d44e1f0d829194fbc837a0bap@chr7:127963997..127964004, -
2.62e-23FFCP PHASE1:Hg19::chr7:127963997..127964004,-#_99be5715d44e1f0d829194fbc837a0bap@chr7:127963997..127964004, -
3.32e-23FFCP PHASE1:Hg19::chr17:813116..813132,+#_9c331ac2c2def4dfc4c6cd03e66e2d49p@chr17:813116..813132, +
3.32e-23FFCP PHASE2:Hg19::chr17:813116..813132,+#_9c331ac2c2def4dfc4c6cd03e66e2d49p@chr17:813116..813132, +
6.41e-23FFCP PHASE2:Hg19::chr16:85617034..85617043,-#_bcb629a8b3ff824d199c6666b8dd49b2p@chr16:85617034..85617043, -
6.41e-23FFCP PHASE1:Hg19::chr16:85617034..85617043,-#_bcb629a8b3ff824d199c6666b8dd49b2p@chr16:85617034..85617043, -
7.17e-23FFCP PHASE2:Hg19::chr5:177652352..177652356,-#_e619161e9360c085006bd0eeb42eb676p6@AGXT2L2
7.17e-23FFCP PHASE1:Hg19::chr5:174252850..174252859,+#_e619161e9360c085006bd0eeb42eb676p@chr5:174252850..174252859, +
7.17e-23FFCP PHASE2:Hg19::chr5:174252850..174252859,+#_e619161e9360c085006bd0eeb42eb676p@chr5:174252850..174252859, +
7.17e-23FFCP PHASE1:Hg19::chr5:177652352..177652356,-#_e619161e9360c085006bd0eeb42eb676p6@AGXT2L2
4.19e-22FFCP PHASE1:Hg19::chr5:33794904..33794916,-#_ed598c139a2131b8b73c398609bec48dp@chr5:33794904..33794916, -
4.19e-22FFCP PHASE2:Hg19::chr5:33794904..33794916,-#_ed598c139a2131b8b73c398609bec48dp@chr5:33794904..33794916, -
3.14e-21FFCP PHASE1:Hg19::chr11:122051600..122051617,+#_6f54d0e495c3bbd898fc5fd9f46b4d80p@chr11:122051600..122051617, +
3.14e-21FFCP PHASE2:Hg19::chr11:122051600..122051617,+#_6f54d0e495c3bbd898fc5fd9f46b4d80p@chr11:122051600..122051617, +
7.71e-21FFCP PHASE1:Hg19::chr21:36208749..36208768,+#_9d79ad6f447872beae5f10b3e1476678p@chr21:36208749..36208768, +
7.71e-21FFCP PHASE2:Hg19::chr21:36208749..36208768,+#_9d79ad6f447872beae5f10b3e1476678p@chr21:36208749..36208768, +
8.88e-21FFCP PHASE1:Hg19::chr20:940152..940156,-#_7506eb14b15990149eb496937df87027p@chr20:940152..940156, -
8.88e-21FFCP PHASE2:Hg19::chr20:940152..940156,-#_7506eb14b15990149eb496937df87027p@chr20:940152..940156, -
9.8e-21FFCP PHASE2:Hg19::chr18:52969844..52969895,-#_143c9f5631ccfa4b71c160c60c8c347ap27@TCF4
9.8e-21FFCP PHASE1:Hg19::chr18:52969844..52969895,-#_143c9f5631ccfa4b71c160c60c8c347ap27@TCF4
1.24e-20FFCP PHASE2:Hg19::chr1:45087902..45087912,+#_5a2d99923a3746795931e29a05da8b64+, p@chr1:45087902..45087912
1.24e-20FFCP PHASE1:Hg19::chr1:45087902..45087912,+#_5a2d99923a3746795931e29a05da8b64p@chr1:45087902..45087912, +
1.29e-20FFCP PHASE1:Hg19::chr12:66036219..66036262,-#_42d2c65fd910d903d7eecfdfb1d6f5c2p1@ENST00000544557
1.29e-20FFCP PHASE2:Hg19::chr12:66036219..66036262,-#_42d2c65fd910d903d7eecfdfb1d6f5c2p1@ENST00000544557
1.32e-20FFCP PHASE1:Hg19::chr7:152549181..152549213,+#_c9d0ab832f95fcd100382eb68c9b3f3fp@chr7:152549181..152549213, +
1.32e-20FFCP PHASE2:Hg19::chr7:152549181..152549213,+#_c9d0ab832f95fcd100382eb68c9b3f3fp@chr7:152549181..152549213, +
1.73e-20FFCP PHASE1:Hg19::chr1:119530682..119530692,-#_c5ba0e7673122a5781d0b306c4b1a29cp10@TBX15
1.73e-20FFCP PHASE2:Hg19::chr1:119530682..119530692,-#_c5ba0e7673122a5781d0b306c4b1a29cp10@TBX15
2.11e-20FFCP PHASE1:Hg19::chr17:73682761..73682766,+#_76845917640f73793a5284815887a905p@chr17:73682761..73682766, +
2.11e-20FFCP PHASE2:Hg19::chr17:73682761..73682766,+#_76845917640f73793a5284815887a905p@chr17:73682761..73682766, +
4.35e-19FFCP PHASE1:Hg19::chr14:38371323..38371347,-#_c28d560026fc89e3a7f451ebbc0a1ca6p1@ENST00000554257, p1@uc001wuk.1
4.35e-19FFCP PHASE2:Hg19::chr14:38371323..38371347,-#_c28d560026fc89e3a7f451ebbc0a1ca6p1@ENST00000554257, p1@uc001wuk.1
4.67e-19FFCP PHASE1:Hg19::chr21:47404148..47404163,+#_067d3581df4479a43f054699b98c6079p@chr21:47404148..47404163, +
4.67e-19FFCP PHASE2:Hg19::chr21:47404148..47404163,+#_067d3581df4479a43f054699b98c6079p@chr21:47404148..47404163, +
5.29e-19FFCP PHASE2:Hg19::chr4:5754385..5754405,+#_28b5033bd52d339a14409772175ff83ap3@EVC
5.29e-19FFCP PHASE1:Hg19::chr4:5754385..5754405,+#_28b5033bd52d339a14409772175ff83ap3@EVC
1.22e-18FFCP PHASE2:Hg19::chr2:177022022..177022060,+#_06fc5fd1fc973e779bd0bccfa3523cf6p@chr2:177022022..177022060, +
1.22e-18FFCP PHASE1:Hg19::chr2:177022022..177022060,+#_06fc5fd1fc973e779bd0bccfa3523cf6p@chr2:177022022..177022060, +
1.35e-18FFCP PHASE1:Hg19::chr12:5198401..5198415,+#_02b5c23bbd882832a4773914bb5deb2ep@chr12:5198401..5198415, +
1.35e-18FFCP PHASE1:Hg19::chr12:2163623..2163634,+#_02b5c23bbd882832a4773914bb5deb2ep@chr12:2163623..2163634, +
1.35e-18FFCP PHASE2:Hg19::chr12:5198401..5198415,+#_02b5c23bbd882832a4773914bb5deb2ep@chr12:5198401..5198415, +
1.35e-18FFCP PHASE2:Hg19::chr12:2163623..2163634,+#_02b5c23bbd882832a4773914bb5deb2ep@chr12:2163623..2163634, +
1.51e-17FFCP PHASE1:Hg19::chr2:201474023..201474035,+#_21c1055b7d754aeb90af6a110e2dcfb0p5@AOX1
1.51e-17FFCP PHASE2:Hg19::chr2:201474023..201474035,+#_21c1055b7d754aeb90af6a110e2dcfb0p5@AOX1
3.53e-17FFCP PHASE1:Hg19::chr12:66036083..66036098,-#_3bfc1a4bf3509f0c05cc4d3fb614314cp3@ENST00000539653
3.53e-17FFCP PHASE2:Hg19::chr12:66036083..66036098,-#_3bfc1a4bf3509f0c05cc4d3fb614314cp3@ENST00000539653
4.17e-17FFCP PHASE2:Hg19::chrX:118362928..118362933,+#_c9daf3dffe3124a44434e27e33199ef8p@chrX:118362928..118362933, +
4.17e-17FFCP PHASE1:Hg19::chrX:118362928..118362933,+#_c9daf3dffe3124a44434e27e33199ef8p@chrX:118362928..118362933, +
4.92e-17FFCP PHASE1:Hg19::chr4:81159520..81159523,+#_02b625b5f69b0559649f7fc0c2df37c4p@chr4:81159520..81159523, +
4.92e-17FFCP PHASE2:Hg19::chr4:81159520..81159523,+#_02b625b5f69b0559649f7fc0c2df37c4p@chr4:81159520..81159523, +
7.89e-17FFCP PHASE2:Hg19::chr2:177502906..177502920,-#_d3c4197e4f45cbb8c05259525af8057bp2@ENST00000295549, p2@uc002ukz.1
7.89e-17FFCP PHASE1:Hg19::chr2:177502906..177502920,-#_d3c4197e4f45cbb8c05259525af8057bp2@ENST00000295549, p2@uc002ukz.1
8.61e-17FFCP PHASE2:Hg19::chr1:85987126..85987173,-#_3fae0e5e2bb1461ffb9b9a6907faa3fdp@chr1:85987126..85987173, -
8.61e-17FFCP PHASE1:Hg19::chr1:85987126..85987173,-#_3fae0e5e2bb1461ffb9b9a6907faa3fdp@chr1:85987126..85987173, -
8.66e-17FFCP PHASE1:Hg19::chr3:139000423..139000454,+#_aad0518a5dabf6662a30d4cdf2f9ccacp3@MRPS22
8.66e-17FFCP PHASE2:Hg19::chr3:139000423..139000454,+#_aad0518a5dabf6662a30d4cdf2f9ccacp3@MRPS22
9.03e-17FFCP PHASE2:Hg19::chr17:46627545..46627560,+#_4965deb446ec377d8d65e14c10795d43+, p@chr17:46627545..46627560
9.03e-17FFCP PHASE1:Hg19::chr17:46627545..46627560,+#_4965deb446ec377d8d65e14c10795d43p@chr17:46627545..46627560, +
1.05e-16FFCP PHASE2:Hg19::chr20:4451008..4451026,-#_8bc478fb7fa770443d3be8933d96ec52p@chr20:4451008..4451026, -
1.05e-16FFCP PHASE1:Hg19::chr20:4451008..4451026,-#_8bc478fb7fa770443d3be8933d96ec52p@chr20:4451008..4451026, -










Property "Property value" (as page type) with input value "UBPROP:0000001 "A collagenous layer of the skin subjacent to the epidermis and covering the hypodermis. It contains various types of cells (e.g. fibroblasts, pigment cells, nerve, blood vessels and scales. Le Guellec et al, 2004.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.