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UBERON:0004120

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Name:mesoderm-derived structure
Namespace:FANTOM
Definition:"An anatomical structure that develops (entirely or partially) from the mesoderm." [UBERON:cjm]
Comments:Grouping term for query purposes
Subset: grouping_class

Ontology association

Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.



link to ontology dataset


data

Parents

is_a:UBERON:0000061(anatomical structure)
develops_from:UBERON:0000926(mesoderm)



Children

is a:UBERON:0000042 (serous membrane),UBERON:0000056 (ureter),UBERON:0000057 (urethra),UBERON:0000074 (renal glomerulus),UBERON:0000077 (mixed endoderm/mesoderm-derived structure),UBERON:0000080 (mesonephros),UBERON:0000162 (cloaca),UBERON:0000305 (amnion),UBERON:0000412 (dermal papilla),UBERON:0000415 (artery wall),UBERON:0000946 (cardial valve),UBERON:0000948 (heart),UBERON:0000990 (reproductive system),UBERON:0001103 (diaphragm),UBERON:0001130 (vertebral column),UBERON:0001178 (visceral peritoneum),UBERON:0001235 (adrenal cortex),UBERON:0001236 (adrenal medulla),UBERON:0001255 (urinary bladder),UBERON:0001256 (wall of urinary bladder),UBERON:0001259 (mucosa of urinary bladder),UBERON:0001468 (intervertebral joint),UBERON:0001601 (extra-ocular muscle),UBERON:0001694 (petrous part of temporal bone),UBERON:0001703 (neurocranium),UBERON:0001839 (bony labyrinth),UBERON:0001844 (cochlea),UBERON:0001981 (blood vessel),UBERON:0001992 (papillary layer of dermis),UBERON:0002067 (dermis),UBERON:0002072 (hypodermis),UBERON:0002120 (pronephros),UBERON:0002190 (subcutaneous adipose tissue),UBERON:0002242 (nucleus pulposus),UBERON:0002319 (mesangium),UBERON:0002321 (extraglomerular mesangium),UBERON:0002328 (notochord),UBERON:0002331 (umbilical cord),UBERON:0002363 (dura mater),UBERON:0002385 (muscle tissue),UBERON:0002390 (hematopoietic system),UBERON:0002517 (basicranium),UBERON:0003077 (paraxial mesoderm),UBERON:0003081 (lateral plate mesoderm),UBERON:0003089 (sclerotome),UBERON:0003112 (olfactory region),UBERON:0003124 (chorion),UBERON:0003220 (metanephric mesenchyme),UBERON:0003422 (mesenchyme of umbilical cord),UBERON:0003688 (omentum)... further results

Ontology Tree: Loaded from BioPortal


FF samples

It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens) Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term
TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004120 (mesoderm-derived structure), sorted by p-values
Analyst: Hideya Kawaji



link to source dataset
human : data

mouse : data

P-valueFFCPShort description
6.38e-40FFCP PHASE1:Hg19::chrX:153637534..153637567,-#_c2e8100d50c0adc4e0eecfbbc08bbdc5p1@DNASE1L1
6.38e-40FFCP PHASE2:Hg19::chrX:153637534..153637567,-#_c2e8100d50c0adc4e0eecfbbc08bbdc5p1@DNASE1L1
6.15e-39FFCP PHASE2:Hg19::chr1:228270784..228270847,+#_d66f81ef1a968667e6f80ec1a6d2bcf6p2@ARF1
6.15e-39FFCP PHASE1:Hg19::chr1:228270784..228270847,+#_d66f81ef1a968667e6f80ec1a6d2bcf6p2@ARF1
9.61e-38FFCP PHASE1:Hg19::chr12:54812992..54813035,-#_9a8131e6e6c8af551630285202bc5036p1@ITGA5
9.61e-38FFCP PHASE2:Hg19::chr12:54812992..54813035,-#_9a8131e6e6c8af551630285202bc5036p1@ITGA5
1.56e-36FFCP PHASE1:Hg19::chr7:143078379..143078454,+#_16a51478e4c3c04587df485fac0085cfp1@ZYX
1.56e-36FFCP PHASE2:Hg19::chr7:143078379..143078454,+#_16a51478e4c3c04587df485fac0085cfp1@ZYX
2.82e-36FFCP PHASE2:Hg19::chr4:103747936..103747993,-#_6241710e33cb19c4d15c2c8faaac20c1p6@UBE2D3
2.82e-36FFCP PHASE1:Hg19::chr4:103747936..103747993,-#_6241710e33cb19c4d15c2c8faaac20c1p6@UBE2D3
5.32e-36FFCP PHASE1:Hg19::chr15:90358115..90358195,-#_2e8b9808128d4af1e1fb5a7738c444cap3@ANPEP
5.32e-36FFCP PHASE2:Hg19::chr15:90358115..90358195,-#_2e8b9808128d4af1e1fb5a7738c444cap3@ANPEP
8.45e-36FFCP PHASE2:Hg19::chr5:180229791..180229829,-#_539cd179c2c4cccd853fe5444cff520bp1@MGAT1
8.45e-36FFCP PHASE1:Hg19::chr5:180229791..180229829,-#_539cd179c2c4cccd853fe5444cff520bp1@MGAT1
1.6e-35FFCP PHASE1:Hg19::chr11:504446..504486,-#_fe79a00f66484038e10ad0026e455613p4@RNH1
1.6e-35FFCP PHASE2:Hg19::chr11:504446..504486,-#_fe79a00f66484038e10ad0026e455613p4@RNH1
2.85e-35FFCP PHASE2:Hg19::chr19:44174330..44174355,-#_de5290ead407ec63da59caa22523d46fp2@PLAUR
2.85e-35FFCP PHASE1:Hg19::chr19:44174330..44174355,-#_de5290ead407ec63da59caa22523d46fp2@PLAUR
3.37e-35FFCP PHASE1:Hg19::chr1:21616690..21616719,-#_386a68fbe2061a840422daae90606a9cp4@ECE1
3.37e-35FFCP PHASE2:Hg19::chr1:21616690..21616719,-#_386a68fbe2061a840422daae90606a9cp4@ECE1
5.03e-35FFCP PHASE2:Hg19::chr7:143079458..143079487,+#_3b4b8104986876eead499918606fb6d5p4@ZYX
5.03e-35FFCP PHASE1:Hg19::chr7:143079458..143079487,+#_3b4b8104986876eead499918606fb6d5p4@ZYX
1.17e-34FFCP PHASE2:Hg19::chr4:15704679..15704733,+#_1cd73bb2280b2c190f4e67102790a044p1@BST1
1.17e-34FFCP PHASE1:Hg19::chr4:15704679..15704733,+#_1cd73bb2280b2c190f4e67102790a044p1@BST1
1.75e-34FFCP PHASE1:Hg19::chrX:153637522..153637533,-#_1746e8398ab7218089fd6379fb6fd762p4@DNASE1L1
1.75e-34FFCP PHASE2:Hg19::chrX:153637522..153637533,-#_1746e8398ab7218089fd6379fb6fd762p4@DNASE1L1
1.89e-34FFCP PHASE2:Hg19::chr19:50015870..50015934,+#_dd94cf526174030025339db141df48d4p2@FCGRT
1.89e-34FFCP PHASE1:Hg19::chr19:50015870..50015934,+#_dd94cf526174030025339db141df48d4p2@FCGRT
2.1e-34FFCP PHASE1:Hg19::chr12:54813229..54813273,-#_0f298a34295f411cd998bcc39c4e1ed8p3@ITGA5
2.1e-34FFCP PHASE2:Hg19::chr12:54813229..54813273,-#_0f298a34295f411cd998bcc39c4e1ed8p3@ITGA5
4.33e-34FFCP PHASE2:Hg19::chr19:44174310..44174329,-#_3f2d1b8ae27922107778c0191bccd7e6p1@PLAUR
4.33e-34FFCP PHASE1:Hg19::chr19:44174310..44174329,-#_3f2d1b8ae27922107778c0191bccd7e6p1@PLAUR
7.52e-34FFCP PHASE1:Hg19::chr1:221052776..221052799,+#_f619a14ef55f1e78421722fc4ea14692p1@HLX
7.52e-34FFCP PHASE2:Hg19::chr1:221052776..221052799,+#_f619a14ef55f1e78421722fc4ea14692p1@HLX
8.49e-34FFCP PHASE2:Hg19::chr4:159093517..159093533,-#_b1413464e64297d37fdc2972295dc883p1@FAM198B
8.49e-34FFCP PHASE1:Hg19::chr4:159093517..159093533,-#_b1413464e64297d37fdc2972295dc883p1@FAM198B
3.78e-33FFCP PHASE1:Hg19::chr15:90358048..90358103,-#_4aabb581bc69f390c3d1d90a426097b0p1@ANPEP
3.78e-33FFCP PHASE2:Hg19::chr15:90358048..90358103,-#_4aabb581bc69f390c3d1d90a426097b0p1@ANPEP
3.32e-32FFCP PHASE1:Hg19::chr7:97911007..97911027,+#_51edcff67e78f8087662ad3c40ff4bdcp3@BRI3
3.32e-32FFCP PHASE2:Hg19::chr7:97911007..97911027,+#_51edcff67e78f8087662ad3c40ff4bdcp3@BRI3
5.72e-32FFCP PHASE2:Hg19::chr7:97910981..97911006,+#_e13bcfff9a301d9cd665bb83b97049ebp1@BRI3
5.72e-32FFCP PHASE1:Hg19::chr7:97910981..97911006,+#_e13bcfff9a301d9cd665bb83b97049ebp1@BRI3
5.73e-32FFCP PHASE2:Hg19::chr19:54371114..54371180,+#_a109e000f58d8a925cd2faa66a619e88p1@MYADM
5.73e-32FFCP PHASE1:Hg19::chr19:54371114..54371180,+#_a109e000f58d8a925cd2faa66a619e88p1@MYADM
7.25e-32FFCP PHASE1:Hg19::chr4:103747996..103748022,-#_5e731a25649a1b8025ec6d1a9fcd542cp4@UBE2D3
7.25e-32FFCP PHASE2:Hg19::chr4:103747996..103748022,-#_5e731a25649a1b8025ec6d1a9fcd542cp4@UBE2D3
7.82e-32FFCP PHASE1:Hg19::chr19:50015936..50015981,+#_3cf65d96ebf7ecb377c82d23ffddebbep3@FCGRT
7.82e-32FFCP PHASE2:Hg19::chr19:50015936..50015981,+#_3cf65d96ebf7ecb377c82d23ffddebbep3@FCGRT
8.33e-32FFCP PHASE2:Hg19::chr8:134584101..134584143,-#_43cd1f089be69d23b77eed7fab21430fp2@ST3GAL1
8.33e-32FFCP PHASE1:Hg19::chr8:134584101..134584143,-#_43cd1f089be69d23b77eed7fab21430fp2@ST3GAL1
1.49e-31FFCP PHASE1:Hg19::chr7:143078652..143078754,+#_c0d47709141434a4aeac9bf2badd7d40p2@ZYX
1.49e-31FFCP PHASE2:Hg19::chr7:143078652..143078754,+#_c0d47709141434a4aeac9bf2badd7d40p2@ZYX
2.42e-31FFCP PHASE2:Hg19::chr1:17944856..17944906,+#_7fc3c50a978696142221dfbdd0c1d970p3@ARHGEF10L
2.42e-31FFCP PHASE1:Hg19::chr1:17944856..17944906,+#_7fc3c50a978696142221dfbdd0c1d970p3@ARHGEF10L
2.88e-31FFCP PHASE1:Hg19::chr12:65153154..65153171,-#_d230a4b6114260c92b23bd7ae77268a8p2@GNS
2.88e-31FFCP PHASE2:Hg19::chr12:65153154..65153171,-#_d230a4b6114260c92b23bd7ae77268a8p2@GNS
8.04e-31FFCP PHASE1:Hg19::chr1:221053049..221053075,+#_ae797ebccde076e210f26ab6ca1ea0d1p3@HLX
8.04e-31FFCP PHASE2:Hg19::chr1:221053049..221053075,+#_ae797ebccde076e210f26ab6ca1ea0d1p3@HLX
8.77e-31FFCP PHASE2:Hg19::chr1:87170448..87170539,+#_e76ff13f79be608165eb87c34c14bf4cp1@SH3GLB1
8.77e-31FFCP PHASE1:Hg19::chr1:87170448..87170539,+#_e76ff13f79be608165eb87c34c14bf4cp1@SH3GLB1
9.41e-31FFCP PHASE1:Hg19::chr10:104403641..104403699,+#_563a0200e18ccc46f2b716b7c951d861p@chr10:104403641..104403699, +
9.41e-31FFCP PHASE2:Hg19::chr10:104403641..104403699,+#_563a0200e18ccc46f2b716b7c951d861p@chr10:104403641..104403699, +
9.71e-31FFCP PHASE2:Hg19::chr4:80994210..80994284,-#_ddeec7e617dfc71be3646cb7465c1ffdp2@ANTXR2
9.71e-31FFCP PHASE1:Hg19::chr4:80994210..80994284,-#_ddeec7e617dfc71be3646cb7465c1ffdp2@ANTXR2
9.83e-31FFCP PHASE1:Hg19::chr4:122618095..122618161,-#_9ac25bd1d45e609b5116dd16f24d2ba9p1@ANXA5
9.83e-31FFCP PHASE2:Hg19::chr4:122618095..122618161,-#_9ac25bd1d45e609b5116dd16f24d2ba9p1@ANXA5
1.49e-30FFCP PHASE1:Hg19::chr9:130616952..130616973,-#_93ed591b3e81b87330d6d14328bea52ep3@ENG
1.49e-30FFCP PHASE2:Hg19::chr9:130616952..130616973,-#_93ed591b3e81b87330d6d14328bea52ep3@ENG
1.87e-30FFCP PHASE2:Hg19::chr1:20987936..20987969,-#_1f2937f34dae190bdb9c9b837e6dc9f8p2@DDOST
1.87e-30FFCP PHASE1:Hg19::chr1:20987936..20987969,-#_1f2937f34dae190bdb9c9b837e6dc9f8p2@DDOST
3.28e-30FFCP PHASE1:Hg19::chrX:46433193..46433237,+#_8433ad40fe02e8e2c13150a91c183a10p1@CHST7
3.28e-30FFCP PHASE2:Hg19::chrX:46433193..46433237,+#_8433ad40fe02e8e2c13150a91c183a10p1@CHST7
3.51e-30FFCP PHASE1:Hg19::chr17:81037473..81037498,+#_ed8359ff5f89a30ef1b96c39172e5087p1@METRNL
3.51e-30FFCP PHASE2:Hg19::chr17:81037473..81037498,+#_ed8359ff5f89a30ef1b96c39172e5087p1@METRNL
3.8e-30FFCP PHASE2:Hg19::chr6:146864960..146864999,+#_c02c7fa752e26e30163b491be03d6ac6p1@RAB32
3.8e-30FFCP PHASE1:Hg19::chr6:146864960..146864999,+#_c02c7fa752e26e30163b491be03d6ac6p1@RAB32
5.98e-30FFCP PHASE1:Hg19::chr3:50273625..50273655,+#_e6a472bed369c576fd67da90946c9765p1@GNAI2
5.98e-30FFCP PHASE2:Hg19::chr3:50273625..50273655,+#_e6a472bed369c576fd67da90946c9765p1@GNAI2
6.52e-30FFCP PHASE1:Hg19::chr7:143077956..143078096,-#_653a4396044c7d5c04d8aecec4b8642bp1@ENST00000429630
6.52e-30FFCP PHASE2:Hg19::chr7:143077956..143078096,-#_653a4396044c7d5c04d8aecec4b8642bp1@ENST00000429630
7.62e-30FFCP PHASE2:Hg19::chr9:35732119..35732199,-#_e1263e1100c72c067f27fed2c130ba40p1@TLN1
7.62e-30FFCP PHASE1:Hg19::chr9:35732119..35732199,-#_e1263e1100c72c067f27fed2c130ba40p1@TLN1
9.35e-30FFCP PHASE2:Hg19::chr5:114938090..114938226,-#_74913505d050632c3e344472474f2181p1@TICAM2, p2@TMED7-TICAM2
9.35e-30FFCP PHASE1:Hg19::chr5:114938090..114938226,-#_74913505d050632c3e344472474f2181p1@TICAM2, p2@TMED7-TICAM2
1.51e-29FFCP PHASE1:Hg19::chr1:59762730..59762773,+#_71d7a46dcf94d790ac6053829d7d8534p1@FGGY
1.51e-29FFCP PHASE2:Hg19::chr1:59762730..59762773,+#_71d7a46dcf94d790ac6053829d7d8534p1@FGGY
1.57e-29FFCP PHASE2:Hg19::chr11:67120956..67120972,-#_296fbdc92c86b20aec1f98a6c3ba0963p2@POLD4
1.57e-29FFCP PHASE1:Hg19::chr11:67120956..67120972,-#_296fbdc92c86b20aec1f98a6c3ba0963p2@POLD4
1.96e-29FFCP PHASE1:Hg19::chr11:504867..504925,-#_f32c12e18610522056af521897caedddp3@RNH1
1.96e-29FFCP PHASE2:Hg19::chr11:504867..504925,-#_f32c12e18610522056af521897caedddp3@RNH1
3.49e-29FFCP PHASE2:Hg19::chr4:159092525..159092574,-#_376b9e5df3ebdefa75c504d0ef73a403p4@FAM198B
3.49e-29FFCP PHASE1:Hg19::chr4:159092525..159092574,-#_376b9e5df3ebdefa75c504d0ef73a403p4@FAM198B
5.21e-29FFCP PHASE1:Hg19::chr3:148709310..148709337,+#_6b19620f80f06b3664151c101954a8adp1@GYG1
5.21e-29FFCP PHASE2:Hg19::chr3:148709310..148709337,+#_6b19620f80f06b3664151c101954a8adp1@GYG1
6.23e-29FFCP PHASE1:Hg19::chr8:146078927..146078951,-#_fee4afdee1d57f2162c849809599e4ddp4@COMMD5
6.23e-29FFCP PHASE2:Hg19::chr8:146078927..146078951,-#_fee4afdee1d57f2162c849809599e4ddp4@COMMD5
7.59e-29FFCP PHASE2:Hg19::chr4:10118348..10118395,-#_7ea0c0c0433fc75e34a2bc598c068f19p1@WDR1
7.59e-29FFCP PHASE1:Hg19::chr4:10118348..10118395,-#_7ea0c0c0433fc75e34a2bc598c068f19p1@WDR1
8.57e-29FFCP PHASE1:Hg19::chr12:53694132..53694153,-#_84dc8cf4deb5904e5a119cb9bac1ac6cp1@ENST00000550263
8.57e-29FFCP PHASE2:Hg19::chr12:53694132..53694153,-#_84dc8cf4deb5904e5a119cb9bac1ac6cp1@ENST00000550263