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UBERON:0004121

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Name:ectoderm-derived structure
Namespace:FANTOM
Definition:"An anatomical structure that develops (entirely or partially) from the ectoderm." [UBERON:cjm]
Comments:Grouping term for query purposes
Subset: grouping_class

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000061(anatomical structure)
develops_from:UBERON:0000924(ectoderm)



Children

is a:UBERON:0000004 (olfactory apparatus),UBERON:0000012 (somatic nervous system),UBERON:0000014 (zone of skin),UBERON:0000019 (camera-type eye),UBERON:0000078 (mixed ectoderm/mesoderm/endoderm-derived structure),UBERON:0000166 (oral opening),UBERON:0000200 (gyrus),UBERON:0000349 (limbic system),UBERON:0000412 (dermal papilla),UBERON:0000941 (cranial nerve II),UBERON:0000955 (brain),UBERON:0000965 (lens of camera-type eye),UBERON:0000966 (retina),UBERON:0001017 (central nervous system),UBERON:0001708 (jaw skeleton),UBERON:0001723 (tongue),UBERON:0001726 (papilla of tongue),UBERON:0001781 (layer of retina),UBERON:0001798 (vitreous body),UBERON:0001801 (anterior segment of eyeball),UBERON:0001802 (posterior segment of eyeball),UBERON:0001811 (conjunctiva),UBERON:0001826 (nasal cavity mucosa),UBERON:0001846 (internal ear),UBERON:0001849 (membranous labyrinth),UBERON:0001855 (cochlear duct of membranous labyrinth),UBERON:0001869 (cerebral hemisphere),UBERON:0001896 (medulla oblongata),UBERON:0001911 (mammary gland),UBERON:0001992 (papillary layer of dermis),UBERON:0002022 (insula),UBERON:0002025 (stratum basale of epidermis),UBERON:0002067 (dermis),UBERON:0002073 (hair follicle),UBERON:0002097 (skin of body),UBERON:0002196 (adenohypophysis),UBERON:0002227 (spiral organ of cochlea),UBERON:0002240 (spinal cord),UBERON:0002242 (nucleus pulposus),UBERON:0002259 (corpora quadrigemina),UBERON:0002328 (notochord),UBERON:0002342 (neural crest),UBERON:0002346 (neurectoderm),UBERON:0002360 (meninx),UBERON:0002419 (skin gland),UBERON:0002499 (cochlear labyrinth),UBERON:0002616 (regional part of brain),UBERON:0003023 (pontine tegmentum),UBERON:0003056 (pre-chordal neural plate),UBERON:0003072 (optic cup)... further results

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004121 (ectoderm-derived structure), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
3.23e-62FFCP PHASE1:Hg19::chr11:31839488..31839515,-#_aeed1f5bb432077d79480aff08b74453p3@PAX6
3.23e-62FFCP PHASE2:Hg19::chr11:31839488..31839515,-#_aeed1f5bb432077d79480aff08b74453p3@PAX6
6.65e-62FFCP PHASE2:Hg19::chr1:197237352..197237414,+#_c8b4b751cb12195ecfb140d54cd8063fp2@CRB1
6.65e-62FFCP PHASE1:Hg19::chr1:197237352..197237414,+#_c8b4b751cb12195ecfb140d54cd8063fp2@CRB1
1.04e-61FFCP PHASE2:Hg19::chr5:11588907..11588967,-#_e0d094702ed381fc44aaa36522d9d53dp3@CTNND2
1.04e-61FFCP PHASE1:Hg19::chr5:11588907..11588967,-#_e0d094702ed381fc44aaa36522d9d53dp3@CTNND2
1.02e-60FFCP PHASE1:Hg19::chr5:87980761..87980821,-#_dd530520728ebc7415fbe6627ad3efc2p4@LINC00461
1.02e-60FFCP PHASE2:Hg19::chr5:87980761..87980821,-#_dd530520728ebc7415fbe6627ad3efc2p4@LINC00461
6.2e-60FFCP PHASE2:Hg19::chr6:123100738..123100763,+#_b0c082b0827a2d50d4dabe8925928435p2@FABP7
6.2e-60FFCP PHASE1:Hg19::chr6:123100738..123100763,+#_b0c082b0827a2d50d4dabe8925928435p2@FABP7
1.12e-59FFCP PHASE2:Hg19::chr11:62475005..62475041,-#_332ce5a2baae004e905ea08963a73458p6@BSCL2
1.12e-59FFCP PHASE1:Hg19::chr11:62475005..62475041,-#_332ce5a2baae004e905ea08963a73458p6@BSCL2
1.34e-59FFCP PHASE1:Hg19::chr4:165305086..165305179,-#_672f9916fc82bfcf3ff9a93b0b951bdap2@MARCH1
1.34e-59FFCP PHASE2:Hg19::chr4:165305086..165305179,-#_672f9916fc82bfcf3ff9a93b0b951bdap2@MARCH1
1.88e-59FFCP PHASE1:Hg19::chr18:59000657..59000672,+#_929cd116586c0d17c8aa9786c45d5e0cp1@CDH20
1.88e-59FFCP PHASE2:Hg19::chr18:59000657..59000672,+#_929cd116586c0d17c8aa9786c45d5e0cp1@CDH20
8.39e-59FFCP PHASE1:Hg19::chrX:13835398..13835429,-#_883bc2a2c682f45d8fccf305c0e8a00ep6@GPM6B
8.39e-59FFCP PHASE2:Hg19::chrX:13835398..13835429,-#_883bc2a2c682f45d8fccf305c0e8a00ep6@GPM6B
9.87e-59FFCP PHASE1:Hg19::chr17:54230819..54230848,+#_4e527aac956937cf604f3ec29d1c594ap1@ANKFN1
9.87e-59FFCP PHASE2:Hg19::chr17:54230819..54230848,+#_4e527aac956937cf604f3ec29d1c594ap1@ANKFN1
2.74e-58FFCP PHASE2:Hg19::chr8:132053136..132053177,-#_eb67d1ec239ce093126c87e793f8df79p2@ADCY8
2.74e-58FFCP PHASE1:Hg19::chr8:132053136..132053177,-#_eb67d1ec239ce093126c87e793f8df79p2@ADCY8
3.3e-58FFCP PHASE1:Hg19::chr11:62474885..62474903,-#_8b5db85de12e0dcf4a8d8d6d0820ea87p5@BSCL2
3.3e-58FFCP PHASE2:Hg19::chr11:62474885..62474903,-#_8b5db85de12e0dcf4a8d8d6d0820ea87p5@BSCL2
3.49e-58FFCP PHASE2:Hg19::chr9:19789028..19789050,-#_c04c15213470c0d4c6146d5c8d0e2d43p1@SLC24A2
3.49e-58FFCP PHASE1:Hg19::chr9:19789028..19789050,-#_c04c15213470c0d4c6146d5c8d0e2d43p1@SLC24A2
1.03e-57FFCP PHASE2:Hg19::chr2:210526233..210526258,+#_7ec70f35c625ea6335bcf3784cb2b32bp9@MAP2
1.03e-57FFCP PHASE1:Hg19::chr2:210526233..210526258,+#_7ec70f35c625ea6335bcf3784cb2b32bp9@MAP2
2.3e-57FFCP PHASE1:Hg19::chr8:30496078..30496130,+#_2b1f0d1cc844935433ecbde7c9af20b3p1@LOC100507341
2.3e-57FFCP PHASE2:Hg19::chr8:30496078..30496130,+#_2b1f0d1cc844935433ecbde7c9af20b3p1@LOC100507341
2.58e-57FFCP PHASE2:Hg19::chr10:62149542..62149590,-#_a5d22696d4fec535ee16027fe9f672dbp1@ANK3
2.58e-57FFCP PHASE1:Hg19::chr10:62149542..62149590,-#_a5d22696d4fec535ee16027fe9f672dbp1@ANK3
2.86e-57FFCP PHASE1:Hg19::chr11:105481612..105481624,+#_6df24d1ddff43f168fac7d5e06301aa1p2@GRIA4
2.86e-57FFCP PHASE2:Hg19::chr11:105481612..105481624,+#_6df24d1ddff43f168fac7d5e06301aa1p2@GRIA4
3.09e-57FFCP PHASE2:Hg19::chr8:9953136..9953190,+#_a31cf71963d3ce82876a55bc1cdd65c7p3@MSRA
3.09e-57FFCP PHASE1:Hg19::chr8:9953136..9953190,+#_a31cf71963d3ce82876a55bc1cdd65c7p3@MSRA
7.06e-57FFCP PHASE2:Hg19::chr12:106976678..106976708,+#_dc9fd962cf0390a0b39b36af959a8338p2@RFX4
7.06e-57FFCP PHASE1:Hg19::chr12:106976678..106976708,+#_dc9fd962cf0390a0b39b36af959a8338p2@RFX4
9.33e-57FFCP PHASE1:Hg19::chr2:210526166..210526232,+#_7e2d2e42fd32c80293bbfa0329b0d016p5@MAP2
9.33e-57FFCP PHASE2:Hg19::chr2:210526166..210526232,+#_7e2d2e42fd32c80293bbfa0329b0d016p5@MAP2
9.72e-57FFCP PHASE1:Hg19::chr5:11904580..11904619,-#_73ca2422e4672c01cf0a0e9706717d5dp6@CTNND2
9.72e-57FFCP PHASE2:Hg19::chr5:11904580..11904619,-#_73ca2422e4672c01cf0a0e9706717d5dp6@CTNND2
1.1e-56FFCP PHASE2:Hg19::chr17:43972989..43973035,-#_73905aacfa1ce2c26ee622888ec1208dp1@LOC100128977
1.1e-56FFCP PHASE1:Hg19::chr17:43972989..43973035,-#_73905aacfa1ce2c26ee622888ec1208dp1@LOC100128977
1.39e-56FFCP PHASE1:Hg19::chr19:46932128..46932207,-#_92633ed088d9bde391a5e8b6bfa5f811p@chr19:46932128..46932207, -
1.39e-56FFCP PHASE1:Hg19::chr5:87437585..87437647,+#_92633ed088d9bde391a5e8b6bfa5f811p@chr5:87437585..87437647, +
1.39e-56FFCP PHASE2:Hg19::chr19:46932128..46932207,-#_92633ed088d9bde391a5e8b6bfa5f811p@chr19:46932128..46932207, -
1.39e-56FFCP PHASE2:Hg19::chr5:87437585..87437647,+#_92633ed088d9bde391a5e8b6bfa5f811p@chr5:87437585..87437647, +
1.4e-56FFCP PHASE1:Hg19::chr11:105481405..105481472,+#_b8195be00f3ca3adafcf87df1687eb15p1@GRIA4
1.4e-56FFCP PHASE2:Hg19::chr11:105481405..105481472,+#_b8195be00f3ca3adafcf87df1687eb15p1@GRIA4
1.65e-56FFCP PHASE2:Hg19::chr4:176733558..176733609,-#_8eedb2dc871f751ad59e62b927d5e8e9p7@GPM6A
1.65e-56FFCP PHASE1:Hg19::chr4:176733558..176733609,-#_8eedb2dc871f751ad59e62b927d5e8e9p7@GPM6A
2.03e-56FFCP PHASE2:Hg19::chr1:205012293..205012326,+#_d8851b1b60f4a0d7c7436cdf9e6eae02p2@CNTN2
2.03e-56FFCP PHASE1:Hg19::chr1:205012293..205012326,+#_d8851b1b60f4a0d7c7436cdf9e6eae02p2@CNTN2
5.74e-56FFCP PHASE1:Hg19::chr4:176733377..176733424,-#_a94fa51bee20af439a5af8b85f0260f9p1@GPM6A
5.74e-56FFCP PHASE2:Hg19::chr4:176733377..176733424,-#_a94fa51bee20af439a5af8b85f0260f9p1@GPM6A
7.08e-56FFCP PHASE2:Hg19::chr12:20848486..20848542,+#_952e98e933b3268ebeab837458707bf0p1@SLCO1C1
7.08e-56FFCP PHASE1:Hg19::chr12:20848486..20848542,+#_952e98e933b3268ebeab837458707bf0p1@SLCO1C1
7.16e-56FFCP PHASE1:Hg19::chr9:19789059..19789070,-#_d45b08ebb750a93ec30ddb0ce1f0853fp2@SLC24A2
7.16e-56FFCP PHASE2:Hg19::chr9:19789059..19789070,-#_d45b08ebb750a93ec30ddb0ce1f0853fp2@SLC24A2
7.49e-56FFCP PHASE2:Hg19::chr11:105480793..105480845,+#_b2fd2f086c396827ebc8f3e37459dbb1p3@GRIA4
7.49e-56FFCP PHASE1:Hg19::chr11:105480793..105480845,+#_b2fd2f086c396827ebc8f3e37459dbb1p3@GRIA4
1.31e-55FFCP PHASE1:Hg19::chr3:181417353..181417371,+#_3a4d1819e2837cf9538a32d186bdd4d2p1@SOX2-OT
1.31e-55FFCP PHASE2:Hg19::chr3:181417353..181417371,+#_3a4d1819e2837cf9538a32d186bdd4d2p1@SOX2-OT
1.32e-55FFCP PHASE2:Hg19::chr4:176733425..176733439,-#_1784a5dc1d3e27b56441580827ee386ep8@GPM6A
1.32e-55FFCP PHASE1:Hg19::chr4:176733425..176733439,-#_1784a5dc1d3e27b56441580827ee386ep8@GPM6A
1.35e-55FFCP PHASE1:Hg19::chr8:9953735..9953778,+#_ed41ed1a79f09c4557132a511e615558p@chr8:9953735..9953778, +
1.35e-55FFCP PHASE2:Hg19::chr8:9953735..9953778,+#_ed41ed1a79f09c4557132a511e615558p@chr8:9953735..9953778, +
1.39e-55FFCP PHASE2:Hg19::chr3:47933982..47934047,-#_a99d140139b3daa36b60fc578799c801p3@MAP4
1.39e-55FFCP PHASE1:Hg19::chr3:47933982..47934047,-#_a99d140139b3daa36b60fc578799c801p3@MAP4
1.59e-55FFCP PHASE2:Hg19::chr3:181417374..181417407,+#_835dc45e16b704599660bbafb1367c9ep2@SOX2-OT
1.59e-55FFCP PHASE1:Hg19::chr3:181417374..181417407,+#_835dc45e16b704599660bbafb1367c9ep2@SOX2-OT
1.87e-55FFCP PHASE1:Hg19::chr21:42219168..42219187,-#_02af06e9cd13374a0a7c44d49c227f1dp2@DSCAM
1.87e-55FFCP PHASE2:Hg19::chr21:42219168..42219187,-#_02af06e9cd13374a0a7c44d49c227f1dp2@DSCAM
2.95e-55FFCP PHASE1:Hg19::chr12:99288536..99288653,-#_c75fb64c17a636ed4f90be1048b70c76p1@ANKS1B
2.95e-55FFCP PHASE2:Hg19::chr12:99288536..99288653,-#_c75fb64c17a636ed4f90be1048b70c76p1@ANKS1B
4.14e-55FFCP PHASE1:Hg19::chr17:49124154..49124169,-#_1948d2d34a2814015819470a4297828ep6@SPAG9
4.14e-55FFCP PHASE2:Hg19::chr17:49124154..49124169,-#_1948d2d34a2814015819470a4297828ep6@SPAG9
7.57e-55FFCP PHASE1:Hg19::chr12:106976774..106976788,+#_365c6e86eb9e8af239cdec42b092b976p1@RFX4
7.57e-55FFCP PHASE2:Hg19::chr12:106976774..106976788,+#_365c6e86eb9e8af239cdec42b092b976p1@RFX4
7.83e-55FFCP PHASE1:Hg19::chr17:42984601..42984636,-#_f9f8d592defba5024a722ff288c6308bp2@GFAP
7.83e-55FFCP PHASE2:Hg19::chr17:42984601..42984636,-#_f9f8d592defba5024a722ff288c6308bp2@GFAP
8.99e-55FFCP PHASE1:Hg19::chr2:210444402..210444423,+#_929d3befec608e3750cd24efbceb3f1bp11@MAP2
8.99e-55FFCP PHASE2:Hg19::chr2:210444402..210444423,+#_929d3befec608e3750cd24efbceb3f1bp11@MAP2
9.16e-55FFCP PHASE2:Hg19::chrX:151619746..151619815,-#_cf67bb678a1290e84efd16b6b0c8240fp1@GABRA3
9.16e-55FFCP PHASE1:Hg19::chrX:151619746..151619815,-#_cf67bb678a1290e84efd16b6b0c8240fp1@GABRA3
1.03e-54FFCP PHASE2:Hg19::chr14:60097524..60097538,-#_f14d4758b89289581ddd97b2fdb0bfd1p3@RTN1
1.03e-54FFCP PHASE1:Hg19::chr14:60097524..60097538,-#_f14d4758b89289581ddd97b2fdb0bfd1p3@RTN1
1.14e-54FFCP PHASE1:Hg19::chr2:210444267..210444287,+#_d0db3346fde2209a0a9f86a5e369c8cep7@MAP2
1.14e-54FFCP PHASE2:Hg19::chr2:210444267..210444287,+#_d0db3346fde2209a0a9f86a5e369c8cep7@MAP2
1.16e-54FFCP PHASE1:Hg19::chr17:43972010..43972027,+#_f69b2c77a66f08ccb0832a56230b7b3ap4@MAPT
1.16e-54FFCP PHASE2:Hg19::chr17:43972010..43972027,+#_f69b2c77a66f08ccb0832a56230b7b3ap4@MAPT
1.28e-54FFCP PHASE1:Hg19::chr19:10563567..10563617,+#_3a63f1323beb3be125debe5d92928bc8p1@PDE4A
1.28e-54FFCP PHASE1:Hg19::chr2:210444345..210444394,+#_3a63f1323beb3be125debe5d92928bc8p3@MAP2
1.28e-54FFCP PHASE2:Hg19::chr2:210444345..210444394,+#_3a63f1323beb3be125debe5d92928bc8p3@MAP2
1.28e-54FFCP PHASE2:Hg19::chr19:10563567..10563617,+#_3a63f1323beb3be125debe5d92928bc8p1@PDE4A
2.04e-54FFCP PHASE2:Hg19::chrX:13835124..13835142,-#_68d5d6c4bdf2d7011a211380044aabbfp5@GPM6B
2.04e-54FFCP PHASE1:Hg19::chrX:13835124..13835142,-#_68d5d6c4bdf2d7011a211380044aabbfp5@GPM6B
2.23e-54FFCP PHASE2:Hg19::chr1:177134024..177134052,-#_998ec847647bacb6a1e14471aef37b17p2@ASTN1
2.23e-54FFCP PHASE1:Hg19::chr1:177134024..177134052,-#_998ec847647bacb6a1e14471aef37b17p2@ASTN1