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UBERON:0004151

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Name:cardiac chamber
Namespace:FANTOM
Definition:"A cardiac chamber surrounds an enclosed cavity within the heart" [GO:0003205]
Xrefs:
links:

FMA:7095
OpenCyc:Mx4rmexpjPdAEduAAAAOpmP6tw

SCTID:276456008
Synonyms: "chamber of heart" EXACT []
"heart chamber" EXACT []
Comments:generic enough to cover FBbt:00003156 heart chamber but this is a cavity. GO defines it as the cavity. TODO - move subclasses. Note this also includes sinus venosus

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000064(organ part),UBERON:0004120(mesoderm-derived structure)
part_of:UBERON:0000948(heart)



Children

is a:UBERON:0002081 (cardiac atrium),UBERON:0002082 (cardiac ventricle)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004151 (cardiac chamber), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.16e-117FFCP PHASE2:Hg19::chr2:179585314..179585321,-#_4793eb66e5cf4bacc42acbf7d8da92a3p@chr2:179585314..179585321, -
1.16e-117FFCP PHASE1:Hg19::chr2:179585314..179585321,-#_4793eb66e5cf4bacc42acbf7d8da92a3-, p@chr2:179585314..179585321
9.74e-88FFCP PHASE1:Hg19::chr1:11905799..11905806,-#_f0d704bc4df8cc26e110c25582f31a0ep@chr1:11905799..11905806, -
9.74e-88FFCP PHASE2:Hg19::chr1:11905799..11905806,-#_f0d704bc4df8cc26e110c25582f31a0ep@chr1:11905799..11905806, -
9.74e-88FFCP PHASE1:Hg19::chr1:11907265..11907271,-#_f0d704bc4df8cc26e110c25582f31a0ep9@NPPA
9.74e-88FFCP PHASE2:Hg19::chr1:11907265..11907271,-#_f0d704bc4df8cc26e110c25582f31a0ep9@NPPA
1.52e-87FFCP PHASE1:Hg19::chr20:55732283..55732288,-#_1bce306d93f5549e8031ae42cc01a784p@chr20:55732283..55732288, -
1.52e-87FFCP PHASE2:Hg19::chr20:55732283..55732288,-#_1bce306d93f5549e8031ae42cc01a784p@chr20:55732283..55732288, -
1.52e-87FFCP PHASE1:Hg19::chr1:1154360..1154365,-#_1bce306d93f5549e8031ae42cc01a784p@chr1:1154360..1154365, -
1.52e-87FFCP PHASE2:Hg19::chr1:1154360..1154365,-#_1bce306d93f5549e8031ae42cc01a784p@chr1:1154360..1154365, -
4.06e-85FFCP PHASE2:Hg19::chr1:78408547..78408558,+#_cd351a2f063cbb520d541c4b6a3e035ep@chr1:78408547..78408558, +
4.06e-85FFCP PHASE1:Hg19::chr1:78408547..78408558,+#_cd351a2f063cbb520d541c4b6a3e035ep@chr1:78408547..78408558, +
9.61e-85FFCP PHASE1:Hg19::chr2:179396338..179396348,-#_e6e5615ac83270f81a2bf7c76583c2c2p@chr2:179396338..179396348, -
9.61e-85FFCP PHASE2:Hg19::chr2:179396338..179396348,-#_e6e5615ac83270f81a2bf7c76583c2c2p@chr2:179396338..179396348, -
9.61e-85FFCP PHASE1:Hg19::chr1:11907441..11907453,-#_e6e5615ac83270f81a2bf7c76583c2c2p3@NPPA
9.61e-85FFCP PHASE2:Hg19::chr1:11907441..11907453,-#_e6e5615ac83270f81a2bf7c76583c2c2p3@NPPA
1.28e-84FFCP PHASE1:Hg19::chr1:11907940..11907947,-#_e92fe02bc6e4dd8ff7d8cc496769d057p2@NPPA
1.28e-84FFCP PHASE2:Hg19::chr1:11907940..11907947,-#_e92fe02bc6e4dd8ff7d8cc496769d057p2@NPPA
2.27e-84FFCP PHASE1:Hg19::chrX:112324334..112324339,-#_3f1a8f99905a7e7caa35f6f5a030f51dp@chrX:112324334..112324339, -
2.27e-84FFCP PHASE2:Hg19::chrX:112324334..112324339,-#_3f1a8f99905a7e7caa35f6f5a030f51dp@chrX:112324334..112324339, -
1.29e-74FFCP PHASE1:Hg19::chr20:44035965..44035976,+#_eda2eafd9d55cc70720fd9c44e9adbb3p30@DBNDD2
1.29e-74FFCP PHASE2:Hg19::chr20:44035965..44035976,+#_eda2eafd9d55cc70720fd9c44e9adbb3p30@DBNDD2
1.66e-74FFCP PHASE2:Hg19::chr2:179504505..179504514,-#_8ff53d7190e118e4552ec390df26de53p@chr2:179504505..179504514, -
1.66e-74FFCP PHASE1:Hg19::chr2:179504505..179504514,-#_8ff53d7190e118e4552ec390df26de53p@chr2:179504505..179504514, -
3.54e-74FFCP PHASE2:Hg19::chr3:131523446..131523459,-#_6355d6ee7fc609662e894c66a0cb9f25p@chr3:131523446..131523459, -
3.54e-74FFCP PHASE1:Hg19::chr1:201328779..201328797,-#_6355d6ee7fc609662e894c66a0cb9f25p@chr1:201328779..201328797, -
3.54e-74FFCP PHASE2:Hg19::chr1:201328779..201328797,-#_6355d6ee7fc609662e894c66a0cb9f25p@chr1:201328779..201328797, -
3.54e-74FFCP PHASE1:Hg19::chr3:131523446..131523459,-#_6355d6ee7fc609662e894c66a0cb9f25p@chr3:131523446..131523459, -
5.84e-74FFCP PHASE2:Hg19::chr1:206838422..206838456,+#_158afd2de3a4f7bb378e4186bd8ef764p@chr1:206838422..206838456, +
5.84e-74FFCP PHASE1:Hg19::chr1:206838422..206838456,+#_158afd2de3a4f7bb378e4186bd8ef764p@chr1:206838422..206838456, +
2.04e-73FFCP PHASE2:Hg19::chr3:16940540..16940554,+#_708adbf28481f959c3777ac41f9c932fp@chr3:16940540..16940554, +
2.04e-73FFCP PHASE1:Hg19::chr3:16940540..16940554,+#_708adbf28481f959c3777ac41f9c932fp@chr3:16940540..16940554, +
7.85e-67FFCP PHASE1:Hg19::chr1:201328328..201328343,-#_e9f55e80dc6f02b3f6a69fc8097f5398p@chr1:201328328..201328343, -
7.85e-67FFCP PHASE2:Hg19::chr1:201328328..201328343,-#_e9f55e80dc6f02b3f6a69fc8097f5398p@chr1:201328328..201328343, -
9.82e-67FFCP PHASE1:Hg19::chr2:179399691..179399696,-#_5ff51ccd2b60335f7dcf3269b42dde82p@chr2:179399691..179399696, -
9.82e-67FFCP PHASE2:Hg19::chr2:179399691..179399696,-#_5ff51ccd2b60335f7dcf3269b42dde82p@chr2:179399691..179399696, -
1.92e-66FFCP PHASE2:Hg19::chr7:123302841..123302854,+#_05fa294516d670c9ff5da965ae3fb2afp@chr7:123302841..123302854, +
1.92e-66FFCP PHASE1:Hg19::chr7:123302841..123302854,+#_05fa294516d670c9ff5da965ae3fb2afp@chr7:123302841..123302854, +
2.39e-66FFCP PHASE2:Hg19::chr15:86272097..86272099,+#_c19505a5634f1ba6f4a9d5759b2102b7p@chr15:86272097..86272099, +
2.39e-66FFCP PHASE1:Hg19::chr10:92678409..92678410,-#_c19505a5634f1ba6f4a9d5759b2102b7p@chr10:92678409..92678410, -
2.39e-66FFCP PHASE1:Hg19::chr1:11907474..11907481,-#_c19505a5634f1ba6f4a9d5759b2102b7p10@NPPA
2.39e-66FFCP PHASE1:Hg19::chr5:99390735..99390743,-#_c19505a5634f1ba6f4a9d5759b2102b7p@chr5:99390735..99390743, -
2.39e-66FFCP PHASE2:Hg19::chr1:11907474..11907481,-#_c19505a5634f1ba6f4a9d5759b2102b7p10@NPPA
2.39e-66FFCP PHASE1:Hg19::chr17:79385898..79385905,-#_c19505a5634f1ba6f4a9d5759b2102b7p@chr17:79385898..79385905, -
2.39e-66FFCP PHASE2:Hg19::chr1:43676416..43676417,-#_c19505a5634f1ba6f4a9d5759b2102b7p@chr1:43676416..43676417, -
2.39e-66FFCP PHASE1:Hg19::chr1:43676416..43676417,-#_c19505a5634f1ba6f4a9d5759b2102b7p@chr1:43676416..43676417, -
2.39e-66FFCP PHASE1:Hg19::chr15:86272097..86272099,+#_c19505a5634f1ba6f4a9d5759b2102b7p@chr15:86272097..86272099, +
2.39e-66FFCP PHASE2:Hg19::chr17:79385898..79385905,-#_c19505a5634f1ba6f4a9d5759b2102b7p@chr17:79385898..79385905, -
2.39e-66FFCP PHASE2:Hg19::chr5:99390735..99390743,-#_c19505a5634f1ba6f4a9d5759b2102b7p@chr5:99390735..99390743, -
2.39e-66FFCP PHASE2:Hg19::chr10:92678409..92678410,-#_c19505a5634f1ba6f4a9d5759b2102b7-, p@chr10:92678409..92678410
2.4e-66FFCP PHASE1:Hg19::chr7:44179972..44179982,-#_7dc2f22b532c4bb45a10a1619c13b360p2@MYL7
2.4e-66FFCP PHASE2:Hg19::chr12:56091538..56091540,-#_7dc2f22b532c4bb45a10a1619c13b360p@chr12:56091538..56091540, -
2.4e-66FFCP PHASE2:Hg19::chr5:80555040..80555044,+#_7dc2f22b532c4bb45a10a1619c13b360p@chr5:80555040..80555044, +
2.4e-66FFCP PHASE1:Hg19::chr12:56091538..56091540,-#_7dc2f22b532c4bb45a10a1619c13b360p@chr12:56091538..56091540, -
2.4e-66FFCP PHASE1:Hg19::chr1:11905830..11905839,-#_7dc2f22b532c4bb45a10a1619c13b360p@chr1:11905830..11905839, -
2.4e-66FFCP PHASE1:Hg19::chr5:80555040..80555044,+#_7dc2f22b532c4bb45a10a1619c13b360p@chr5:80555040..80555044, +
2.4e-66FFCP PHASE2:Hg19::chr7:44179972..44179982,-#_7dc2f22b532c4bb45a10a1619c13b360p2@MYL7
2.4e-66FFCP PHASE2:Hg19::chr1:11905830..11905839,-#_7dc2f22b532c4bb45a10a1619c13b360p@chr1:11905830..11905839, -
3.01e-66FFCP PHASE1:Hg19::chr10:127569398..127569410,-#_761ed3a2abd0884dc70ba1d07b74def0p5@DHX32
3.01e-66FFCP PHASE2:Hg19::chr10:127569398..127569410,-#_761ed3a2abd0884dc70ba1d07b74def0p5@DHX32
3.35e-66FFCP PHASE1:Hg19::chr1:11906020..11906041,+#_e6760969cff9bf7efbdc63b3ca1a43c4p@chr1:11906020..11906041, +
3.35e-66FFCP PHASE2:Hg19::chr1:11906020..11906041,+#_e6760969cff9bf7efbdc63b3ca1a43c4p@chr1:11906020..11906041, +
3.35e-66FFCP PHASE1:Hg19::chr14:23854188..23854193,-#_e6760969cff9bf7efbdc63b3ca1a43c4p@chr14:23854188..23854193, -
3.35e-66FFCP PHASE1:Hg19::chr7:44180643..44180652,-#_e6760969cff9bf7efbdc63b3ca1a43c4p3@MYL7
3.35e-66FFCP PHASE2:Hg19::chr14:23854188..23854193,-#_e6760969cff9bf7efbdc63b3ca1a43c4p@chr14:23854188..23854193, -
3.35e-66FFCP PHASE1:Hg19::chr12:4735761..4735787,-#_e6760969cff9bf7efbdc63b3ca1a43c4p@chr12:4735761..4735787, -
3.35e-66FFCP PHASE2:Hg19::chr7:44180643..44180652,-#_e6760969cff9bf7efbdc63b3ca1a43c4p3@MYL7
3.35e-66FFCP PHASE2:Hg19::chr12:4735761..4735787,-#_e6760969cff9bf7efbdc63b3ca1a43c4p@chr12:4735761..4735787, -
3.76e-66FFCP PHASE1:Hg19::chrX:121555838..121555874,+#_4473824453022ac01d87d4903f9e49e4p@chrX:121555838..121555874, +
3.76e-66FFCP PHASE2:Hg19::chrX:121555838..121555874,+#_4473824453022ac01d87d4903f9e49e4p@chrX:121555838..121555874, +
4.68e-66FFCP PHASE2:Hg19::chr7:44178491..44178498,-#_ac73fbb79bbbaeaf4d74d46e4bbf4f78p@chr7:44178491..44178498, -
4.68e-66FFCP PHASE1:Hg19::chr7:44178491..44178498,-#_ac73fbb79bbbaeaf4d74d46e4bbf4f78p@chr7:44178491..44178498, -
5.88e-66FFCP PHASE1:Hg19::chr2:179648899..179648909,-#_ecd9c285b12423fa390356ff14b7fdd5p@chr2:179648899..179648909, -
5.88e-66FFCP PHASE2:Hg19::chr2:179648899..179648909,-#_ecd9c285b12423fa390356ff14b7fdd5p@chr2:179648899..179648909, -
6.53e-66FFCP PHASE1:Hg19::chr9:38311053..38311058,+#_d8a3dc25b55248d21bf6191dae25adc9p@chr9:38311053..38311058, +
6.53e-66FFCP PHASE1:Hg19::chr2:15679051..15679071,-#_d8a3dc25b55248d21bf6191dae25adc9p@chr2:15679051..15679071, -
6.53e-66FFCP PHASE2:Hg19::chr12:114886577..114886589,-#_d8a3dc25b55248d21bf6191dae25adc9-, p@chr12:114886577..114886589
6.53e-66FFCP PHASE1:Hg19::chr20:32029111..32029122,-#_d8a3dc25b55248d21bf6191dae25adc9p@chr20:32029111..32029122, -
6.53e-66FFCP PHASE2:Hg19::chr2:15679051..15679071,-#_d8a3dc25b55248d21bf6191dae25adc9p@chr2:15679051..15679071, -
6.53e-66FFCP PHASE2:Hg19::chr11:20070858..20070863,-#_d8a3dc25b55248d21bf6191dae25adc9p5@NAV2-AS2
6.53e-66FFCP PHASE1:Hg19::chr11:20070858..20070863,-#_d8a3dc25b55248d21bf6191dae25adc9p5@NAV2-AS2
6.53e-66FFCP PHASE1:Hg19::chr12:114886577..114886589,-#_d8a3dc25b55248d21bf6191dae25adc9p@chr12:114886577..114886589, -
6.53e-66FFCP PHASE2:Hg19::chr20:32029111..32029122,-#_d8a3dc25b55248d21bf6191dae25adc9-, p@chr20:32029111..32029122
6.53e-66FFCP PHASE2:Hg19::chr9:38311053..38311058,+#_d8a3dc25b55248d21bf6191dae25adc9p@chr9:38311053..38311058, +
7.35e-66FFCP PHASE1:Hg19::chr6:36812225..36812238,-#_239150bd39b63bb1286c680e0dafd4a7p@chr6:36812225..36812238, -
7.35e-66FFCP PHASE2:Hg19::chr6:36812225..36812238,-#_239150bd39b63bb1286c680e0dafd4a7p@chr6:36812225..36812238, -
1.79e-65FFCP PHASE2:Hg19::chr4:62999501..62999517,+#_ed4a0814db5773f01e0ff470bc6ec4c9p@chr4:62999501..62999517, +
1.79e-65FFCP PHASE1:Hg19::chr4:62999501..62999517,+#_ed4a0814db5773f01e0ff470bc6ec4c9p@chr4:62999501..62999517, +
2.98e-60FFCP PHASE1:Hg19::chr5:79029312..79029328,+#_1f7d65b25ebf4e1e732a434e921befc4p9@CMYA5
2.98e-60FFCP PHASE2:Hg19::chr5:79029312..79029328,+#_1f7d65b25ebf4e1e732a434e921befc4p9@CMYA5
3.65e-60FFCP PHASE2:Hg19::chr1:201328177..201328208,-#_beb98853c82cc88174ec6dc6a040ebc9p@chr1:201328177..201328208, -
3.65e-60FFCP PHASE2:Hg19::chr4:47833348..47833366,+#_beb98853c82cc88174ec6dc6a040ebc9p@chr4:47833348..47833366, +
3.65e-60FFCP PHASE1:Hg19::chr4:47833348..47833366,+#_beb98853c82cc88174ec6dc6a040ebc9p@chr4:47833348..47833366, +
3.65e-60FFCP PHASE1:Hg19::chr1:201328177..201328208,-#_beb98853c82cc88174ec6dc6a040ebc9p@chr1:201328177..201328208, -
4.46e-60FFCP PHASE2:Hg19::chr2:71576703..71576714,+#_df793800a25fb58cfb6d3b15f09521f8p15@ZNF638
4.46e-60FFCP PHASE2:Hg19::chr5:145439648..145439659,+#_df793800a25fb58cfb6d3b15f09521f8p1@FJ695509
4.46e-60FFCP PHASE1:Hg19::chr5:145439648..145439659,+#_df793800a25fb58cfb6d3b15f09521f8p1@FJ695509
4.46e-60FFCP PHASE1:Hg19::chr2:71576703..71576714,+#_df793800a25fb58cfb6d3b15f09521f8p15@ZNF638
6.68e-60FFCP PHASE2:Hg19::chr15:86227895..86227898,+#_a3f6a60c3a87444637d2500dc14803dep54@AKAP13
6.68e-60FFCP PHASE1:Hg19::chr15:86227895..86227898,+#_a3f6a60c3a87444637d2500dc14803dep54@AKAP13