UBERON:0002102
From FANTOM5_SSTAR
Name: | forelimb | ||
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Namespace: | FANTOM | ||
Definition: | "A (free) limb that is connected to a pectoral girdle. The extent of this structure includes autopod, stylopod and zeugopod regions when present, but excludes the pectoral girdle and its parts." [UBERONREF:0000003, Wikipedia:Forelimb] | ||
Xrefs: |
| ||
Synonyms: |
"anteriormost limb" EXACT [] "fore limb" EXACT [] "foreleg" RELATED [] "forelimb" EXACT [] "free part of upper limb" EXACT [FMA:24878] "free upper limb" EXACT [FMA:24878, UBERONREF:0000003] "membrum superius" EXACT [FMA:7183, FMA:TA] "pectoral limb" EXACT [] "superior member" EXACT [] "upper extremity" EXACT [] "upper limb" EXACT [] | ||
Comments: | AO notes: note that this corresponds to FMA:'free upper limb' (a limb segment), NOT 'upper limb'. Both MA and FMA consider shoulder (and shoulder bones) part of upper limb. Usage notes: Note distinction between arm and forelimb. hand is part of forelimb, but not part of arm | ||
Alt_id: | UBERON:FMA_7183-MA_0000025-MIAA_0000394-XAO_0003030 | ||
Subset: | uberon_slim |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0002101(limb),UBERON:0004710(pectoral appendage) |
---|---|
develops_from: | UBERON:0005417(forelimb bud) |
part_of: | UBERON:0010708(pectoral complex),UBERON:0000153(anterior region of body),UBERON:0010708(pectoral complex) |
Children
is a: | UBERON:0000024 (forelimb wing) |
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derives from: | FF:0011277 (mouse forelimb- embryo E17 sample),FF:0011278 (mouse forelimb- embryo E18 sample),FF:0011314 (mouse forelimb- embryo E11 sample),FF:0011322 (mouse forelimb- embryo E12 sample),FF:0011331 (mouse forelimb- embryo E13 sample),FF:0011342 (mouse forelimb- embryo E14 sample),FF:0011351 (mouse forelimb- embryo E15 sample) |
part of: | UBERON:0002398 (manus),UBERON:0003531 (forelimb skin),UBERON:0008785 (upper limb segment) |
Ontology Tree: Loaded from BioPortal
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10232-103I7 (chicken wing buds, day03 (HH20))
- 10286-104F7 (Skin - palm, donor1)
- 10314-104I8
- 10342-105C9
- 1517-43C4 (forelimb, embryo E17)
- 1520-43B5 (forelimb, embryo E18)
- 335-25E2 (forelimb, embryo E11)
- 359-14H2 (forelimb, embryo E12)
- 384-1E2 (forelimb, embryo E13)
- 413-26A8 (forelimb, embryo E14)
... further results Mouse (Mus musculus)
- 10232-103I7 (chicken wing buds, day03 (HH20))
- 10286-104F7 (Skin - palm, donor1)
- 10314-104I8
- 10342-105C9
- 1517-43C4 (forelimb, embryo E17)
- 1520-43B5 (forelimb, embryo E18)
- 335-25E2 (forelimb, embryo E11)
- 359-14H2 (forelimb, embryo E12)
- 384-1E2 (forelimb, embryo E13)
- 413-26A8 (forelimb, embryo E14)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002102 (forelimb), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
1.33e-86 | FFCP PHASE2:Mm9::chr2:74499300..74499309,-#_f0d8f2944531a749fb1a8d195dc6650e | p5@Evx2 |
1.33e-86 | FFCP PHASE1:Mm9::chr2:74499300..74499309,-#_f0d8f2944531a749fb1a8d195dc6650e | p5@Evx2 |
2.4e-74 | FFCP PHASE2:Mm9::chr5:120256413..120256428,-#_9568b07d0918292100cb409905703231 | p@chr5:120256413..120256428, - |
2.4e-74 | FFCP PHASE2:Mm9::chr2:165983686..165983720,-#_9568b07d0918292100cb409905703231 | p@chr2:165983686..165983720, - |
2.4e-74 | FFCP PHASE1:Mm9::chr2:165983686..165983720,-#_9568b07d0918292100cb409905703231 | -, p@chr2:165983686..165983720 |
2.4e-74 | FFCP PHASE1:Mm9::chr5:120256413..120256428,-#_9568b07d0918292100cb409905703231 | p@chr5:120256413..120256428, - |
2.4e-74 | FFCP PHASE2:Mm9::chr15:51484092..51484121,-#_9568b07d0918292100cb409905703231 | p@chr15:51484092..51484121, - |
2.4e-74 | FFCP PHASE1:Mm9::chr15:51484092..51484121,-#_9568b07d0918292100cb409905703231 | p@chr15:51484092..51484121, - |
1.21e-61 | FFCP PHASE2:Mm9::chr2:74505324..74505330,+#_a1a79208981c5772e1cd95371cc2a16b | p@chr2:74505324..74505330, + |
1.21e-61 | FFCP PHASE1:Mm9::chr2:74505324..74505330,+#_a1a79208981c5772e1cd95371cc2a16b | p@chr2:74505324..74505330, + |
2.24e-61 | FFCP PHASE1:Mm9::chr2:74506264..74506286,+#_5151331ec7c551b9fcf68952b2214549 | p1@Hoxd13 |
2.24e-61 | FFCP PHASE2:Mm9::chr2:74506264..74506286,+#_5151331ec7c551b9fcf68952b2214549 | p1@Hoxd13 |
3.63e-52 | FFCP PHASE2:Mm9::chr2:74513064..74513089,+#_2ecdc27ed7f4086441e7b5d93e475847 | p2@Hoxd12 |
3.63e-52 | FFCP PHASE1:Mm9::chr2:74513064..74513089,+#_2ecdc27ed7f4086441e7b5d93e475847 | p2@Hoxd12 |
4.62e-52 | FFCP PHASE1:Mm9::chr2:74499251..74499258,-#_c125e5e5e8f72295540ee1b6d6ba7493 | p4@Evx2 |
4.62e-52 | FFCP PHASE2:Mm9::chr2:74499251..74499258,-#_c125e5e5e8f72295540ee1b6d6ba7493 | p4@Evx2 |
5.88e-52 | FFCP PHASE1:Mm9::chr2:33574246..33574257,-#_2014925bfde2ad059d5c03728be68fd2 | p3@ENSMUST00000130532 |
5.88e-52 | FFCP PHASE2:Mm9::chr2:33574246..33574257,-#_2014925bfde2ad059d5c03728be68fd2 | p3@ENSMUST00000130532 |
5.28e-50 | FFCP PHASE2:Mm9::chr2:74521516..74521525,+#_742a44e4cbc08cf391376e6eb378ba61 | p1@ENSMUST00000136302 |
5.28e-50 | FFCP PHASE1:Mm9::chr2:74521516..74521525,+#_742a44e4cbc08cf391376e6eb378ba61 | p1@ENSMUST00000136302 |
9.21e-50 | FFCP PHASE1:Mm9::chr6:51009701..51009744,-#_75845dcde6fb71066e7aac0bb862a527 | p@chr6:51009701..51009744, - |
9.21e-50 | FFCP PHASE2:Mm9::chr6:51009701..51009744,-#_75845dcde6fb71066e7aac0bb862a527 | p@chr6:51009701..51009744, - |
2.92e-48 | FFCP PHASE2:Mm9::chr10:97069737..97069749,+#_f535a560ec87a2ff8b7a9fd2cb09efa3 | p5@Kera |
2.92e-48 | FFCP PHASE1:Mm9::chr10:97069737..97069749,+#_f535a560ec87a2ff8b7a9fd2cb09efa3 | p5@Kera |
4.71e-48 | FFCP PHASE2:Mm9::chr6:52210816..52210831,-#_98cebc32fe6151d0ba23bcd9f4b51727 | p2@Hoxa13 |
4.71e-48 | FFCP PHASE1:Mm9::chr6:52210816..52210831,-#_98cebc32fe6151d0ba23bcd9f4b51727 | p2@Hoxa13 |
6.47e-48 | FFCP PHASE2:Mm9::chr2:74513149..74513159,+#_65afddc71df64195f4c73055756ee429 | p@chr2:74513149..74513159, + |
6.47e-48 | FFCP PHASE1:Mm9::chr2:74513149..74513159,+#_65afddc71df64195f4c73055756ee429 | p@chr2:74513149..74513159, + |
1.4e-44 | FFCP PHASE1:Mm9::chr1:165288513..165288518,+#_20e38d848bfb14fe0cd2e0ab448ccb3e | p@chr1:165288513..165288518, + |
1.4e-44 | FFCP PHASE2:Mm9::chr1:165288513..165288518,+#_20e38d848bfb14fe0cd2e0ab448ccb3e | p@chr1:165288513..165288518, + |
2.07e-41 | FFCP PHASE1:Mm9::chr1:164064835..164064864,-#_6468e6a952f30f862b69d45a42534855 | p3@Dnm3 |
2.07e-41 | FFCP PHASE2:Mm9::chr1:164064835..164064864,-#_6468e6a952f30f862b69d45a42534855 | p3@Dnm3 |
2.91e-40 | FFCP PHASE2:Mm9::chr2:33574267..33574279,-#_cf090ac862f063d7337535027f9b7ebf | p1@ENSMUST00000130532 |
2.91e-40 | FFCP PHASE1:Mm9::chr2:33574267..33574279,-#_cf090ac862f063d7337535027f9b7ebf | p1@ENSMUST00000130532 |
3.67e-40 | FFCP PHASE2:Mm9::chr2:33574309..33574319,-#_407a542867de5283f28f00fca9b09cf0 | p4@ENSMUST00000130532 |
3.67e-40 | FFCP PHASE1:Mm9::chr2:33574309..33574319,-#_407a542867de5283f28f00fca9b09cf0 | p4@ENSMUST00000130532 |
5.46e-39 | FFCP PHASE2:Mm9::chr6:52195000..52195013,+#_7c70997785a5f0c0768529b863c560fd | p3@Hoxa11as |
5.46e-39 | FFCP PHASE1:Mm9::chr6:52195000..52195013,+#_7c70997785a5f0c0768529b863c560fd | p3@Hoxa11as |
6.59e-38 | FFCP PHASE2:Mm9::chr2:74512009..74512012,+#_8c59ed92264d2cc6b76b55fef32526f6 | p@chr2:74512009..74512012, + |
6.59e-38 | FFCP PHASE1:Mm9::chr2:74512009..74512012,+#_8c59ed92264d2cc6b76b55fef32526f6 | +, p@chr2:74512009..74512012 |
1.94e-35 | FFCP PHASE1:Mm9::chr2:33496847..33496857,+#_c4ee3df0f15550b3ceee2e3f0b4ef4bc | p3@ENSMUST00000147294, p3@uc008jia.1 |
1.94e-35 | FFCP PHASE2:Mm9::chr2:33496847..33496857,+#_c4ee3df0f15550b3ceee2e3f0b4ef4bc | p3@ENSMUST00000147294, p3@uc008jia.1 |
9.74e-35 | FFCP PHASE1:Mm9::chr13:89680110..89680115,+#_5742e7fc09cc8d8631cbfa474a4321dc | p6@Hapln1 |
9.74e-35 | FFCP PHASE2:Mm9::chr13:89680110..89680115,+#_5742e7fc09cc8d8631cbfa474a4321dc | p6@Hapln1 |
2.95e-34 | FFCP PHASE1:Mm9::chr9:96754986..96754989,-#_806e0a6d43f550407a3e1d793f359b66 | p3@Acpl2 |
2.95e-34 | FFCP PHASE2:Mm9::chr9:96754986..96754989,-#_806e0a6d43f550407a3e1d793f359b66 | p3@Acpl2 |
6.28e-34 | FFCP PHASE1:Mm9::chr8:23734491..23734495,+#_4fb2a7c9707f6202867ca8d974feccc0 | p1@Dkk4 |
6.28e-34 | FFCP PHASE2:Mm9::chr8:23734491..23734495,+#_4fb2a7c9707f6202867ca8d974feccc0 | p1@Dkk4 |
7.62e-34 | FFCP PHASE1:Mm9::chr2:155770985..155770995,-#_26e52ffd228c5c5532d0b97f64a46c6c | p2@Gdf5 |
7.62e-34 | FFCP PHASE2:Mm9::chr2:155770985..155770995,-#_26e52ffd228c5c5532d0b97f64a46c6c | p2@Gdf5 |
2.0e-33 | FFCP PHASE2:Mm9::chr18:80910310..80910329,-#_960ca435997f1a06b6bcc7d1bd33a899 | p@chr18:80910310..80910329, - |
2.0e-33 | FFCP PHASE1:Mm9::chr18:80910310..80910329,-#_960ca435997f1a06b6bcc7d1bd33a899 | p@chr18:80910310..80910329, - |
1.89e-32 | FFCP PHASE2:Mm9::chr6:52210774..52210787,-#_d7ae9901c26ee9ef1e66e31c0728f48e | p1@Hoxa13 |
1.89e-32 | FFCP PHASE1:Mm9::chr6:52210774..52210787,-#_d7ae9901c26ee9ef1e66e31c0728f48e | p1@Hoxa13 |
6.43e-32 | FFCP PHASE2:Mm9::chr2:33498116..33498124,+#_c2c27d1e59c937731f68c5fea537aaa3 | p@chr2:33498116..33498124, + |
6.43e-32 | FFCP PHASE1:Mm9::chr2:33498116..33498124,+#_c2c27d1e59c937731f68c5fea537aaa3 | p@chr2:33498116..33498124, + |
7.44e-32 | FFCP PHASE2:Mm9::chr2:33496574..33496588,+#_c6978af42d3deaddb84d54248a6aca45 | p4@ENSMUST00000152118, p4@uc008jhz.1 |
7.44e-32 | FFCP PHASE1:Mm9::chr2:33496574..33496588,+#_c6978af42d3deaddb84d54248a6aca45 | p4@ENSMUST00000152118, p4@uc008jhz.1 |
1.09e-30 | FFCP PHASE1:Mm9::chr2:74520075..74520087,+#_0255dc8efd1b8e37f3c7b91fe28ed866 | p6@Hoxd11 |
1.09e-30 | FFCP PHASE2:Mm9::chr2:74520075..74520087,+#_0255dc8efd1b8e37f3c7b91fe28ed866 | p6@Hoxd11 |
2.22e-30 | FFCP PHASE2:Mm9::chr12:34649201..34649205,+#_36e90950c22e14a13eb4c77717937058 | +, p@chr12:34649201..34649205 |
2.22e-30 | FFCP PHASE1:Mm9::chr12:34649201..34649205,+#_36e90950c22e14a13eb4c77717937058 | p@chr12:34649201..34649205, + |
1.6e-29 | FFCP PHASE2:Mm9::chr5:120285104..120285113,+#_8e131bb673c371c077515a9c6d533f47 | p5@Tbx5 |
1.6e-29 | FFCP PHASE1:Mm9::chr5:120285104..120285113,+#_8e131bb673c371c077515a9c6d533f47 | p5@Tbx5 |
4.13e-29 | FFCP PHASE1:Mm9::chr5:120246556..120246565,+#_e26b41d17015e679cd6a0409497ae98a | p@chr5:120246556..120246565, + |
4.13e-29 | FFCP PHASE2:Mm9::chr5:120246556..120246565,+#_e26b41d17015e679cd6a0409497ae98a | p@chr5:120246556..120246565, + |
4.91e-29 | FFCP PHASE2:Mm9::chr5:120246522..120246553,+#_e129c6f94e91b5297bc7ae98810488ed | p@chr5:120246522..120246553, + |
4.91e-29 | FFCP PHASE1:Mm9::chr5:120246522..120246553,+#_e129c6f94e91b5297bc7ae98810488ed | p@chr5:120246522..120246553, + |
5.59e-29 | FFCP PHASE2:Mm9::chr16:77329743..77329754,+#_f710738b3571092e90623f064e34fa0c | p14@2810055G20Rik |
5.59e-29 | FFCP PHASE1:Mm9::chr16:77329743..77329754,+#_f710738b3571092e90623f064e34fa0c | p14@2810055G20Rik |
8.27e-29 | FFCP PHASE1:Mm9::chr3:29912310..29912321,-#_7848fe93286d0f4147259a69e27b4187 | p23@Mecom |
8.27e-29 | FFCP PHASE2:Mm9::chr3:29912310..29912321,-#_7848fe93286d0f4147259a69e27b4187 | p23@Mecom |
6.5e-28 | FFCP PHASE1:Mm9::chr3:99044251..99044260,+#_5825db1b00a41d4989534e250d1fdde9 | p8@Tbx15 |
6.5e-28 | FFCP PHASE2:Mm9::chr3:99044251..99044260,+#_5825db1b00a41d4989534e250d1fdde9 | p8@Tbx15 |
3.95e-27 | FFCP PHASE1:Mm9::chr15:97807283..97807309,-#_47922b095459e378e151c321c284f917 | p@chr15:97807283..97807309, - |
3.95e-27 | FFCP PHASE2:Mm9::chr15:97807283..97807309,-#_47922b095459e378e151c321c284f917 | p@chr15:97807283..97807309, - |
5.23e-27 | FFCP PHASE1:Mm9::chr1:165244244..165244254,-#_74d58d34def530cb6fc75b3a47b28db2 | p8@Prrx1 |
5.23e-27 | FFCP PHASE2:Mm9::chr1:165244244..165244254,-#_74d58d34def530cb6fc75b3a47b28db2 | p8@Prrx1 |
1.4e-26 | FFCP PHASE2:Mm9::chr5:42155277..42155281,-#_8f6a2eb24df77c1ca18a5f7b5db66259 | p2@Nkx3-2 |
1.4e-26 | FFCP PHASE1:Mm9::chr5:42155277..42155281,-#_8f6a2eb24df77c1ca18a5f7b5db66259 | p2@Nkx3-2 |
1.64e-26 | FFCP PHASE1:Mm9::chr16:95807232..95807250,-#_079d5a351fe426c10e8089b001d34971 | p@chr16:95807232..95807250, - |
1.64e-26 | FFCP PHASE2:Mm9::chr16:95807232..95807250,-#_079d5a351fe426c10e8089b001d34971 | p@chr16:95807232..95807250, - |
7.57e-26 | FFCP PHASE1:Mm9::chr3:86116124..86116132,+#_2adcd780b85c1c483a4d0238ff941eb0 | p@chr3:86116124..86116132, + |
7.57e-26 | FFCP PHASE1:Mm9::chr3:37606335..37606337,-#_2adcd780b85c1c483a4d0238ff941eb0 | -, p@chr3:37606335..37606337 |
7.57e-26 | FFCP PHASE1:Mm9::chr4:125973415..125973418,+#_2adcd780b85c1c483a4d0238ff941eb0 | p@chr4:125973415..125973418, + |
7.57e-26 | FFCP PHASE2:Mm9::chr3:37606335..37606337,-#_2adcd780b85c1c483a4d0238ff941eb0 | p@chr3:37606335..37606337, - |
7.57e-26 | FFCP PHASE2:Mm9::chr4:125973415..125973418,+#_2adcd780b85c1c483a4d0238ff941eb0 | p@chr4:125973415..125973418, + |
7.57e-26 | FFCP PHASE2:Mm9::chr3:86116124..86116132,+#_2adcd780b85c1c483a4d0238ff941eb0 | p@chr3:86116124..86116132, + |
1.07e-25 | FFCP PHASE2:Mm9::chr17:68300324..68300336,-#_17a07503088e277c8c4c88516e18663e | p5@Arhgap28 |
1.07e-25 | FFCP PHASE1:Mm9::chr17:68300324..68300336,-#_17a07503088e277c8c4c88516e18663e | p5@Arhgap28 |
2.33e-25 | FFCP PHASE2:Mm9::chr7:75096968..75096978,+#_bcda3de63c0252a346aa0770d75d3a3f | p9@Igf1r |
2.33e-25 | FFCP PHASE1:Mm9::chr7:75096968..75096978,+#_bcda3de63c0252a346aa0770d75d3a3f | p9@Igf1r |
2.93e-25 | FFCP PHASE2:Mm9::chr15:101936581..101936594,+#_c5d02982519cf6c1d724b173427f6aa7 | p@chr15:101936581..101936594, + |
2.93e-25 | FFCP PHASE1:Mm9::chr15:101936581..101936594,+#_c5d02982519cf6c1d724b173427f6aa7 | p@chr15:101936581..101936594, + |
2.99e-25 | FFCP PHASE1:Mm9::chr17:23882313..23882330,-#_8313030b5d0b83ce249d108f61202ff0 | p@chr17:23882313..23882330, - |
2.99e-25 | FFCP PHASE2:Mm9::chr17:23882313..23882330,-#_8313030b5d0b83ce249d108f61202ff0 | p@chr17:23882313..23882330, - |
3.52e-25 | FFCP PHASE2:Mm9::chr2:155771018..155771042,-#_7feca5689396a266558283cfa70428fb | p1@Gdf5 |
3.52e-25 | FFCP PHASE1:Mm9::chr2:155771018..155771042,-#_7feca5689396a266558283cfa70428fb | p1@Gdf5 |
2.77e-24 | FFCP PHASE1:Mm9::chr15:77137392..77137399,-#_74ecbf71c40274e64452ea5113b0df61 | p16@Rbfox2 |
2.77e-24 | FFCP PHASE2:Mm9::chr15:77137392..77137399,-#_74ecbf71c40274e64452ea5113b0df61 | p16@Rbfox2 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Upper limb, which connects the manus with the pectoral girdle.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.