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UBERON:0002405

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Name:immune system
Namespace:FANTOM
Definition:"Anatomical system that protects the body from foreign substances, cells, and tissues by producing the immune response and that includes especially the thymus, spleen, lymphoid tissue, lymphocytes including the B cells and T cells, and antibodies." [NLM:immune+system, Wikipedia:Immune_system]
Xrefs:
links:

AAO:0011003
BILA:0000104
FMA:9825
GAID:328
MA:0002711
MESH:A.15.382
ncithesaurus:Immune_System
OpenCyc:Mx4rvWNkm5wpEbGdrcN5Y29ycA
SCTID:362590003
TAO:0001159
VHOG:0001247
XAO:0003152

ZFA:0001159
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_9825-MA_0002711-XAO_0003152-ZFA_0001159
Subset: uberon_slim
vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000467(anatomical system)
disjoint_from:UBERON:0002416(integumental system),UBERON:0002423(hepatobiliary system),UBERON:0004456(entire sense organ system)



Children

disjoint from:UBERON:0000949 (endocrine system),UBERON:0000990 (reproductive system),UBERON:0001004 (respiratory system),UBERON:0001007 (digestive system),UBERON:0001008 (renal system),UBERON:0001009 (circulatory system),UBERON:0001016 (nervous system),UBERON:0001033 (gustatory system),UBERON:0001434 (skeletal system),UBERON:0002204 (musculoskeletal system),UBERON:0002294 (biliary system),UBERON:0002330 (exocrine system),UBERON:0002390 (hematopoietic system)
part of:CL:0000738 (leukocyte),UBERON:0002106 (spleen),UBERON:0002370 (thymus),UBERON:0002371 (bone marrow),UBERON:0002465 (lymphoid system),UBERON:0005057 (immune organ),UBERON:0005562 (thymus primordium)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002405 (immune system), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
7.86e-103FFCP PHASE1:Hg19::chr1:161187824..161187847,+#_f04738958b767004a48281a58084edb6p@chr1:161187824..161187847, +
7.86e-103FFCP PHASE2:Hg19::chr1:161187824..161187847,+#_f04738958b767004a48281a58084edb6p@chr1:161187824..161187847, +
3.11e-98FFCP PHASE1:Hg19::chr16:50313426..50313459,+#_8b6cc8bb6b0fb209f437c48b99bbca70p@chr16:50313426..50313459, +
3.11e-98FFCP PHASE2:Hg19::chr16:50313426..50313459,+#_8b6cc8bb6b0fb209f437c48b99bbca70p@chr16:50313426..50313459, +
1.87e-96FFCP PHASE1:Hg19::chr1:161188746..161188758,+#_7836a647c165b721cc84c67cda4e8d98p@chr1:161188746..161188758, +
1.87e-96FFCP PHASE2:Hg19::chr1:161188746..161188758,+#_7836a647c165b721cc84c67cda4e8d98p@chr1:161188746..161188758, +
2.36e-95FFCP PHASE2:Hg19::chr1:161188661..161188679,+#_0ef797085235fd62fb1badf4458d0cbcp@chr1:161188661..161188679, +
2.36e-95FFCP PHASE1:Hg19::chr1:161188661..161188679,+#_0ef797085235fd62fb1badf4458d0cbcp@chr1:161188661..161188679, +
2.31e-92FFCP PHASE1:Hg19::chr4:159727272..159727307,+#_0b3ccdfa43be8c928a79abf0389931b9p7@FNIP2
2.31e-92FFCP PHASE2:Hg19::chr4:159727272..159727307,+#_0b3ccdfa43be8c928a79abf0389931b9p7@FNIP2
8.32e-92FFCP PHASE1:Hg19::chr19:18288651..18288682,+#_bc4206de4156c3d81448bc077462a555p5@IFI30
8.32e-92FFCP PHASE2:Hg19::chr19:18288651..18288682,+#_bc4206de4156c3d81448bc077462a555p5@IFI30
6.63e-91FFCP PHASE2:Hg19::chr4:185314151..185314178,-#_b4341d1965f5ed3e5ace3de425ca6fb6p@chr4:185314151..185314178, -
6.63e-91FFCP PHASE1:Hg19::chr4:185314151..185314178,-#_b4341d1965f5ed3e5ace3de425ca6fb6p@chr4:185314151..185314178, -
2.23e-90FFCP PHASE2:Hg19::chr7:77050554..77050601,+#_19c710b896653b31c64e51ef20dd0e7ep@chr7:77050554..77050601, +
2.23e-90FFCP PHASE1:Hg19::chr7:77050554..77050601,+#_19c710b896653b31c64e51ef20dd0e7ep@chr7:77050554..77050601, +
4.39e-90FFCP PHASE1:Hg19::chr18:2847062..2847071,+#_c80550db7e9536f2f8dbba0bd975c5eap7@EMILIN2
4.39e-90FFCP PHASE2:Hg19::chr18:2847062..2847071,+#_c80550db7e9536f2f8dbba0bd975c5eap7@EMILIN2
5.36e-89FFCP PHASE2:Hg19::chr17:7482481..7482508,-#_49d141d286a8eaaada8ee37e3a972ac8p@chr17:7482481..7482508, -
5.36e-89FFCP PHASE1:Hg19::chr17:7482481..7482508,-#_49d141d286a8eaaada8ee37e3a972ac8p@chr17:7482481..7482508, -
2.0e-88FFCP PHASE1:Hg19::chr4:185314125..185314143,-#_cd05e8ab035b92ca916ea4a06a614227p@chr4:185314125..185314143, -
2.0e-88FFCP PHASE2:Hg19::chr4:185314125..185314143,-#_cd05e8ab035b92ca916ea4a06a614227p@chr4:185314125..185314143, -
2.39e-88FFCP PHASE1:Hg19::chr1:111743000..111743011,+#_d3f7c7998a2647a4d58e5d077d972d57p8@CHI3L2
2.39e-88FFCP PHASE2:Hg19::chr1:111743000..111743011,+#_d3f7c7998a2647a4d58e5d077d972d57p8@CHI3L2
2.46e-88FFCP PHASE1:Hg19::chr19:18288828..18288861,+#_5a15a643cc970050936b5c7778e72e1ap7@IFI30
2.46e-88FFCP PHASE2:Hg19::chr19:18288828..18288861,+#_5a15a643cc970050936b5c7778e72e1ap7@IFI30
1.07e-87FFCP PHASE2:Hg19::chr4:185314188..185314207,-#_544c8dc3a59df3c55fbc02f17fac0812p@chr4:185314188..185314207, -
1.07e-87FFCP PHASE1:Hg19::chr4:185314188..185314207,-#_544c8dc3a59df3c55fbc02f17fac0812p@chr4:185314188..185314207, -
3.43e-87FFCP PHASE1:Hg19::chr1:161188686..161188721,+#_b3084553dc9447291fb089ea04ae9f2fp@chr1:161188686..161188721, +
3.43e-87FFCP PHASE2:Hg19::chr1:161188686..161188721,+#_b3084553dc9447291fb089ea04ae9f2f+, p@chr1:161188686..161188721
1.51e-86FFCP PHASE1:Hg19::chr4:3387239..3387324,-#_dae8c6e948f53c3feba9c00344599c74p@chr4:3387239..3387324, -
1.51e-86FFCP PHASE2:Hg19::chr4:3387239..3387324,-#_dae8c6e948f53c3feba9c00344599c74p@chr4:3387239..3387324, -
4.76e-86FFCP PHASE2:Hg19::chr7:2832730..2832791,+#_8692f22a0f543448b5aa0fcf02a87029p@chr7:2832730..2832791, +
4.76e-86FFCP PHASE1:Hg19::chr7:2832730..2832791,+#_8692f22a0f543448b5aa0fcf02a87029+, p@chr7:2832730..2832791
1.19e-85FFCP PHASE1:Hg19::chr5:180242646..180242657,-#_ab22e60957938afa71f2286c95f0112fp15@MGAT1
1.19e-85FFCP PHASE2:Hg19::chr5:180242646..180242657,-#_ab22e60957938afa71f2286c95f0112fp15@MGAT1
1.83e-85FFCP PHASE1:Hg19::chr1:161188826..161188842,+#_b5232bfda69abea263d28b323c5325b6p@chr1:161188826..161188842, +
1.83e-85FFCP PHASE2:Hg19::chr1:161188826..161188842,+#_b5232bfda69abea263d28b323c5325b6p@chr1:161188826..161188842, +
1.01e-84FFCP PHASE2:Hg19::chr17:7483714..7483726,+#_faffad48dd6298a7eee2b1b373f8348ep@chr17:7483714..7483726, +
1.01e-84FFCP PHASE1:Hg19::chr17:7483714..7483726,+#_faffad48dd6298a7eee2b1b373f8348ep@chr17:7483714..7483726, +
1.19e-84FFCP PHASE1:Hg19::chr17:40168698..40168726,-#_0e749e31020a5e629ccccefeeed78106p1@AK126179
1.19e-84FFCP PHASE2:Hg19::chr17:40168698..40168726,-#_0e749e31020a5e629ccccefeeed78106p1@AK126179
7.07e-84FFCP PHASE2:Hg19::chr2:145429606..145429658,+#_cee7eb3cb5ff959a2bd04178b117be78p@chr2:145429606..145429658, +
7.07e-84FFCP PHASE1:Hg19::chr2:145429606..145429658,+#_cee7eb3cb5ff959a2bd04178b117be78p@chr2:145429606..145429658, +
9.51e-84FFCP PHASE1:Hg19::chr2:119726719..119726744,+#_099e9bd6b654d9ea3299245488fcbb56p@chr2:119726719..119726744, +
9.51e-84FFCP PHASE2:Hg19::chr2:119726719..119726744,+#_099e9bd6b654d9ea3299245488fcbb56p@chr2:119726719..119726744, +
9.61e-84FFCP PHASE2:Hg19::chr20:1517945..1517963,-#_4516a0358dafd8885e2f9a73b9119cc1p@chr20:1517945..1517963, -
9.61e-84FFCP PHASE1:Hg19::chr20:1517945..1517963,-#_4516a0358dafd8885e2f9a73b9119cc1p@chr20:1517945..1517963, -
1.61e-83FFCP PHASE2:Hg19::chr19:18283959..18283993,+#_5adaf159dd23255a2817a54410d48467p@chr19:18283959..18283993, +
1.61e-83FFCP PHASE1:Hg19::chr19:18283959..18283993,+#_5adaf159dd23255a2817a54410d48467p@chr19:18283959..18283993, +
3.47e-83FFCP PHASE1:Hg19::chr1:155959853..155959881,-#_d1b9661981898852df6a6d6eca8d6378p11@ARHGEF2
3.47e-83FFCP PHASE2:Hg19::chr1:155959853..155959881,-#_d1b9661981898852df6a6d6eca8d6378p11@ARHGEF2
3.54e-83FFCP PHASE1:Hg19::chr17:72542163..72542182,-#_b5d8b68fd02058b8fc421b80a92a08b1p2@CD300C
3.54e-83FFCP PHASE2:Hg19::chr17:72542163..72542182,-#_b5d8b68fd02058b8fc421b80a92a08b1p2@CD300C
3.78e-83FFCP PHASE2:Hg19::chr19:18286116..18286156,+#_ad00d4dadaadd6554b30287eb771a80cp@chr19:18286116..18286156, +
3.78e-83FFCP PHASE1:Hg19::chr19:18286116..18286156,+#_ad00d4dadaadd6554b30287eb771a80cp@chr19:18286116..18286156, +
1.52e-82FFCP PHASE1:Hg19::chr2:38358217..38358244,+#_4d5cc917ce0caa6716dac1b1ed96debcp1@CYP1B1-AS1
1.52e-82FFCP PHASE2:Hg19::chr2:38358217..38358244,+#_4d5cc917ce0caa6716dac1b1ed96debcp1@CYP1B1-AS1
3.08e-82FFCP PHASE2:Hg19::chr15:65174546..65174583,-#_3cfd9460878e6180522de19b1ec6fc7ap@chr15:65174546..65174583, -
3.08e-82FFCP PHASE1:Hg19::chr15:65174546..65174583,-#_3cfd9460878e6180522de19b1ec6fc7ap@chr15:65174546..65174583, -
9.01e-82FFCP PHASE2:Hg19::chr3:149531627..149531651,+#_afe025c09a8e1ce988da798a0ee3def2p7@RNF13
9.01e-82FFCP PHASE1:Hg19::chr3:149531627..149531651,+#_afe025c09a8e1ce988da798a0ee3def2p7@RNF13
1.25e-81FFCP PHASE2:Hg19::chr1:161187774..161187799,+#_8ba9e833a152f8f627eff2997a4dea8c+, p@chr1:161187774..161187799
1.25e-81FFCP PHASE1:Hg19::chr1:161187774..161187799,+#_8ba9e833a152f8f627eff2997a4dea8cp@chr1:161187774..161187799, +
1.36e-81FFCP PHASE2:Hg19::chr9:137264970..137264982,+#_0e894dc13f37ab6a6bf1b1ef84071358p@chr9:137264970..137264982, +
1.36e-81FFCP PHASE1:Hg19::chr9:137264970..137264982,+#_0e894dc13f37ab6a6bf1b1ef84071358p@chr9:137264970..137264982, +
1.38e-81FFCP PHASE2:Hg19::chr19:52299474..52299504,-#_8c8214494abd0d28be834978a94f4a8cp@chr19:52299474..52299504, -
1.38e-81FFCP PHASE1:Hg19::chr19:52299474..52299504,-#_8c8214494abd0d28be834978a94f4a8cp@chr19:52299474..52299504, -
1.88e-81FFCP PHASE1:Hg19::chr5:131280548..131280574,-#_7e5166eb8c5073e8d5bf0fd2d53ff339p1@ENST00000425320
1.88e-81FFCP PHASE2:Hg19::chr5:131280548..131280574,-#_7e5166eb8c5073e8d5bf0fd2d53ff339p1@ENST00000425320
4.02e-81FFCP PHASE2:Hg19::chr19:18288064..18288080,+#_850a313d089f85e817a10105a23bb981p@chr19:18288064..18288080, +
4.02e-81FFCP PHASE1:Hg19::chr19:18288064..18288080,+#_850a313d089f85e817a10105a23bb981p@chr19:18288064..18288080, +
1.01e-80FFCP PHASE1:Hg19::chr10:73648356..73648408,-#_593cd7f34197bfcbfd65d679d1b79539p@chr10:73648356..73648408, -
1.01e-80FFCP PHASE2:Hg19::chr10:73648356..73648408,-#_593cd7f34197bfcbfd65d679d1b79539p@chr10:73648356..73648408, -
1.48e-80FFCP PHASE2:Hg19::chr6:163836917..163836950,-#_f6983995631eaaeb81557084165a51eep@chr6:163836917..163836950, -
1.48e-80FFCP PHASE1:Hg19::chr6:163836917..163836950,-#_f6983995631eaaeb81557084165a51eep@chr6:163836917..163836950, -
2.43e-80FFCP PHASE2:Hg19::chr9:19230548..19230598,+#_d05383d5265ac9ba9529da54a04619a4p@chr9:19230548..19230598, +
2.43e-80FFCP PHASE1:Hg19::chr9:19230548..19230598,+#_d05383d5265ac9ba9529da54a04619a4p@chr9:19230548..19230598, +
8.18e-80FFCP PHASE2:Hg19::chr2:145276939..145276960,+#_a0b967a60d545f0c3d15ca9530403e8dp2@ZEB2-AS1
8.18e-80FFCP PHASE1:Hg19::chr2:145276939..145276960,+#_a0b967a60d545f0c3d15ca9530403e8dp2@ZEB2-AS1
8.22e-80FFCP PHASE2:Hg19::chr12:51402938..51402955,-#_57db0174e9a3e57db5e7b344a15a2490p7@SLC11A2
8.22e-80FFCP PHASE1:Hg19::chr12:51402938..51402955,-#_57db0174e9a3e57db5e7b344a15a2490p7@SLC11A2
8.44e-80FFCP PHASE2:Hg19::chrX:37664331..37664352,+#_67c99957d0161a874636e5406b3eec99p@chrX:37664331..37664352, +
8.44e-80FFCP PHASE1:Hg19::chrX:37664331..37664352,+#_67c99957d0161a874636e5406b3eec99p@chrX:37664331..37664352, +
1.12e-79FFCP PHASE1:Hg19::chrX:153286067..153286101,-#_e75226b7dc536fda2f7dd645fc9f0acep@chrX:153286067..153286101, -
1.12e-79FFCP PHASE2:Hg19::chrX:153286067..153286101,-#_e75226b7dc536fda2f7dd645fc9f0acep@chrX:153286067..153286101, -
1.21e-79FFCP PHASE2:Hg19::chr8:116588888..116588904,+#_a23a22e809e8a13198857ef35644b77bp@chr8:116588888..116588904, +
1.21e-79FFCP PHASE1:Hg19::chr8:116588888..116588904,+#_a23a22e809e8a13198857ef35644b77bp@chr8:116588888..116588904, +
1.25e-79FFCP PHASE2:Hg19::chr1:145610717..145610730,+#_d0d77a4699850320096a1755e22160c3p4@RNF115
1.25e-79FFCP PHASE1:Hg19::chr1:145610717..145610730,+#_d0d77a4699850320096a1755e22160c3p4@RNF115
1.7e-79FFCP PHASE1:Hg19::chr19:18285973..18285996,+#_ae12c45630b43e16de9d291361c79c59p@chr19:18285973..18285996, +
1.7e-79FFCP PHASE2:Hg19::chr19:18285973..18285996,+#_ae12c45630b43e16de9d291361c79c59p@chr19:18285973..18285996, +
2.0e-79FFCP PHASE2:Hg19::chr2:129283966..129283970,+#_76db8c75c2458cc9f980c3a6d8ff31d9p@chr2:129283966..129283970, +
2.0e-79FFCP PHASE1:Hg19::chr2:129283966..129283970,+#_76db8c75c2458cc9f980c3a6d8ff31d9p@chr2:129283966..129283970, +
2.34e-79FFCP PHASE2:Hg19::chr1:150724282..150724308,-#_3f2e492256b15ff9f0d20d33b1265408p8@CTSS
2.34e-79FFCP PHASE1:Hg19::chr1:150724282..150724308,-#_3f2e492256b15ff9f0d20d33b1265408p8@CTSS
2.51e-79FFCP PHASE1:Hg19::chr17:4643027..4643036,-#_a995b8bf3c77f369304ec246cffdf37cp10@CXCL16
2.51e-79FFCP PHASE2:Hg19::chr17:4643027..4643036,-#_a995b8bf3c77f369304ec246cffdf37cp10@CXCL16
3.43e-79FFCP PHASE1:Hg19::chr1:26602990..26603008,+#_60a1b9c0b92ee80d3f1334e0019ba680p@chr1:26602990..26603008, +
3.43e-79FFCP PHASE2:Hg19::chr1:26602990..26603008,+#_60a1b9c0b92ee80d3f1334e0019ba680p@chr1:26602990..26603008, +