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UBERON:0000467

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Name:anatomical system
Namespace:FANTOM
Definition:"Anatomical group that is has as its parts distinct anatomical structures interconnected by anatomical structures at a lower level of granularity[CARO]. A group of organs that work together to perform a certain task [Wikipedia]." [CARO:0000011, CARO:MAH, Wikipedia:Organ_system]
Xrefs:
links:

AAO:0000007
AEO:0000011
BILA:0000011
CARO:0000011
EHDAA2:0001330
EHDAA2:0003011
EHDAA:392
EMAPA:16103
EV:0100000
FBbt:00004856
FMA:7149
galen:AnatomicalSystem
HAO:0000011
MA:0000003
ncithesaurus:Organ_System
NIF_GrossAnatomy:birnlex_14
OpenCyc:Mx4rCWM0QCtDEdyAAADggVbxzQ
SCTID:278195005
TAO:0001439
TGMA:0001831
WBbt:0005746
XAO:0003002

ZFA:0001439
Synonyms: "body system" EXACT [NIF_GrossAnatomy:birnlex_14]
"organ system" EXACT []
"system" BROAD [GO:0048731]
Alt_id: UBERON:CARO_0000011-XAO_0003002-ZFA_0001439
UBERON:FBbt_00004856-FBbt_00004969-FMA_7149-FMA_72979-MA_0000003-MA_0000014-MIAA_0000033-WBbt_0005730-XAO_0000176
Subset: uberon_slim
upper_level

Ontology association

Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.



link to ontology dataset


data

Parents

is_a:UBERON:0000480(anatomical group)
part_of:UBERON:0000468(multi-cellular organism)



Children

is a:UBERON:0000383 (musculature of body),UBERON:0000949 (endocrine system),UBERON:0000990 (reproductive system),UBERON:0001004 (respiratory system),UBERON:0001007 (digestive system),UBERON:0001008 (renal system),UBERON:0001009 (circulatory system),UBERON:0001016 (nervous system),UBERON:0001032 (sensory system),UBERON:0001033 (gustatory system),UBERON:0001434 (skeletal system),UBERON:0002193 (hemolymphoid system),UBERON:0002204 (musculoskeletal system),UBERON:0002294 (biliary system),UBERON:0002330 (exocrine system),UBERON:0002390 (hematopoietic system),UBERON:0002405 (immune system),UBERON:0002416 (integumental system),UBERON:0002423 (hepatobiliary system),UBERON:0003956 (aqueous drainage system),UBERON:0004122 (genitourinary system),UBERON:0004456 (entire sense organ system),UBERON:0004535 (cardiovascular system),UBERON:0004770 (articular system),UBERON:0005281 (ventricular system of central nervous system),UBERON:0005282 (ventricular system of brain),UBERON:0005409 (gastrointestinal system),UBERON:0006524 (alveolar system),UBERON:0007798 (vascular system)
part of:UBERON:0000062 (organ),UBERON:0011216 (organ system subdivision)

Ontology Tree: Loaded from BioPortal


FF samples

It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens) Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term
TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000467 (anatomical system), sorted by p-values
Analyst: Hideya Kawaji



link to source dataset
human : data

mouse : data

No analysis results










Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical group that has as its parts distinct anatomical structures interconnected by anatomical structures at a lower level of granularity.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
,
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical group that is has as its parts distinct anatomical structures interconnected by anatomical structures at a lower level of granularity.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
,
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical group that is has as its parts distinct anatomical structures interconnected by anatomical structures at a lower level of granularity.[CARO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.