UBERON:0003128
From FANTOM5_SSTAR
Name: | cranium | ||
---|---|---|---|
Namespace: | FANTOM | ||
Definition: | "Upper portion of the skull that excludes the mandible (when present in the organism)." [Wikipedia:Cranium_(anatomy)] | ||
Xrefs: |
| ||
Synonyms: |
"bones of cranium" EXACT [FMA:71325] "calvarium" RELATED [BTO:0001328] "epicranial plate" RELATED [] "ossa cranii" EXACT [FMA:71325, FMA:TA] "skeletal system of head" RELATED [] "skull minus mandible" EXACT [] "upper part of skull" EXACT [] | ||
Comments: | The term cranium can be ambiguous, in that it can refer to the neurocranium, or the neurocranium and the Facial skeleton[WP]. AO notes: the inclusion of the FMA class here is probably not quite correct, as this class includes as parts sutures, whereas this is not part of the bones of the cranium | ||
Subset: |
uberon_slim vertebrate_core |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0000075(subdivision of skeletal system) |
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part_of: | UBERON:0003129(skull) |
Children
part of: | UBERON:0001703 (neurocranium),UBERON:0004339 (calvarium),UBERON:0004766 (cranial bone) |
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Ontology Tree: Loaded from BioPortal
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10195-103E6 (olfactory region, adult)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Mouse (Mus musculus)
- 10195-103E6 (olfactory region, adult)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003128 (cranium), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
1.87e-86 | FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr14:47293487..47293493, - |
1.87e-86 | FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Otol1 |
1.87e-86 | FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_c07e35bfbcad3a9ca1580153639f40d6 | p6@Jag1 |
1.87e-86 | FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr17:13983102..13983126, + |
1.87e-86 | FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr11:75421384..75421397, + |
1.87e-86 | FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_c07e35bfbcad3a9ca1580153639f40d6 | p11@Tsga14 |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Tecta |
1.87e-86 | FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr1:78523144..78523177, + |
1.87e-86 | FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr4:154208086..154208123, + |
1.87e-86 | FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr8:13414289..13414295, + |
1.87e-86 | FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr5:150945209..150945220, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Gm1322 |
1.87e-86 | FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr7:29733825..29733837, - |
1.87e-86 | FFCP PHASE2:Mm9::chr7:27964761..27964768,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr7:27964761..27964768, + |
1.87e-86 | FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr15:103146966..103146971, - |
1.87e-86 | FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr2:75320183..75320189, + |
1.87e-86 | FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Fanca |
1.87e-86 | FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr12:109905399..109905416, + |
1.87e-86 | FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr3:31585340..31585360, + |
1.87e-86 | FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_c07e35bfbcad3a9ca1580153639f40d6 | p9@Otof |
1.87e-86 | FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_c07e35bfbcad3a9ca1580153639f40d6 | p4@Otogl |
1.87e-86 | FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr8:13414289..13414295, + |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr9:42206784..42206793, - |
1.87e-86 | FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Epyc |
1.87e-86 | FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Plscr5 |
1.87e-86 | FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr1:172843847..172843880, - |
1.87e-86 | FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr14:47293496..47293510, - |
1.87e-86 | FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr11:75421384..75421397, + |
1.87e-86 | FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_c07e35bfbcad3a9ca1580153639f40d6 | p2@uc007rhb.1 |
1.87e-86 | FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Espnl |
1.87e-86 | FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Tectb |
1.87e-86 | FFCP PHASE1:Mm9::chr2:128881546..128881553,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr2:128881546..128881553, - |
1.87e-86 | FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr11:4689837..4689845, - |
1.87e-86 | FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Tomt |
1.87e-86 | FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr3:154459246..154459253, + |
1.87e-86 | FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr4:63079735..63079745, - |
1.87e-86 | FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Slc26a5 |
1.87e-86 | FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr14:20649897..20649907, + |
1.87e-86 | FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr11:8405038..8405048, - |
1.87e-86 | FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr3:100724698..100724706, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr9:56208792..56208814, - |
1.87e-86 | FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Tmprss3 |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_c07e35bfbcad3a9ca1580153639f40d6 | p5@Tecta |
1.87e-86 | FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr18:66033526..66033539, - |
1.87e-86 | FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr2:128881546..128881553, - |
1.87e-86 | FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Fanca |
1.87e-86 | FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr6:86745686..86745727, - |
1.87e-86 | FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_c07e35bfbcad3a9ca1580153639f40d6 | p4@Kncn |
1.87e-86 | FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chrX:154140781..154140788, + |
1.87e-86 | FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr1:182528388..182528403, + |
1.87e-86 | FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr1:194818647..194818660, - |
1.87e-86 | FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr12:13508015..13508019, + |
1.87e-86 | FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr13:58283583..58283607, - |
1.87e-86 | FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr13:78257454..78257465, + |
1.87e-86 | FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr12:13508015..13508019, + |
1.87e-86 | FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr6:86745686..86745727, - |
1.87e-86 | FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Strc |
1.87e-86 | FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_c07e35bfbcad3a9ca1580153639f40d6 | p7@A730017C20Rik |
1.87e-86 | FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Otof |
1.87e-86 | FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr17:13983179..13983190, + |
1.87e-86 | FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr15:65641779..65641790, + |
1.87e-86 | FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr15:85334335..85334353, + |
1.87e-86 | FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr11:4689776..4689785, - |
1.87e-86 | FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Gpr152 |
1.87e-86 | FFCP PHASE2:Mm9::chr14:47293487..47293493,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr14:47293487..47293493, - |
1.87e-86 | FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Otol1 |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr9:42207397..42207408, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr9:66860888..66860899, + |
1.87e-86 | FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_c07e35bfbcad3a9ca1580153639f40d6 | p4@Gipc3 |
1.87e-86 | FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Kncn |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_c07e35bfbcad3a9ca1580153639f40d6 | p6@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr15:89215306..89215315, + |
1.87e-86 | FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr16:93971325..93971337, - |
1.87e-86 | FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_c07e35bfbcad3a9ca1580153639f40d6 | p13@Tsga14 |
1.87e-86 | FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr5:150945209..150945220, + |
1.87e-86 | FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr13:78257491..78257498, + |
1.87e-86 | FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Otogl |
1.87e-86 | FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr18:42158627..42158630, - |
1.87e-86 | FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr5:3909290..3909299, + |
1.87e-86 | FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr4:101908153..101908163, + |
1.87e-86 | FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr1:182528371..182528385, + |
1.87e-86 | FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Tomt |
1.87e-86 | FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Espnl |
1.87e-86 | FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr2:53464178..53464186, + |
1.87e-86 | FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr15:97806034..97806061, + |
1.87e-86 | FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Tectb |
1.87e-86 | FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr14:47293496..47293510, - |
1.87e-86 | FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr17:13983160..13983167, + |
1.87e-86 | FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Gm1322 |
1.87e-86 | FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_c07e35bfbcad3a9ca1580153639f40d6 | p41@Cacnb2 |
1.87e-86 | FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_c07e35bfbcad3a9ca1580153639f40d6 | p4@Chrna10 |
1.87e-86 | FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr3:154459184..154459195, + |
1.87e-86 | FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr15:85334335..85334353, + |
1.87e-86 | FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Tmprss3 |
1.87e-86 | FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr11:11599532..11599539, - |
1.87e-86 | FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr8:13425469..13425503, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Gm1322 |
1.87e-86 | FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr12:109905468..109905474, + |
1.87e-86 | FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr15:103146966..103146971, - |
1.87e-86 | FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr15:89215306..89215315, + |