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UBERON:0004645

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Name:urinary bladder urothelium
Namespace:FANTOM
Xrefs:
links:

BTO:0001694
FMA:15936
MA:0001693
ncithesaurus:Transitional_Epithelium

SCTID:25631003
Synonyms: "bladder transitional cell epithelium" EXACT [FMA:15936]
"transitional epithelium" RELATED [MA:0001693]
"transitional epithelium of urinary bladder" EXACT [FMA:15936]
"urinary bladder transitional epithelium" EXACT [FMA:15936]
"urothelium" BROAD [BTO:0001245]
"urothelium of urinary bladder" EXACT [FMA:15936]

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000077(mixed endoderm/mesoderm-derived structure),UBERON:0000365(urothelium),UBERON:0003350(epithelium of mucosa),UBERON:0012275(meso-epithelium)
part_of:UBERON:0001255(urinary bladder),UBERON:0001259(mucosa of urinary bladder)



Children

derives from:FF:0100792 (urinary bladder cancer cell line sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004645 (urinary bladder urothelium), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr15:101282110..101282113,+#_cc9520f1613fb31927ab60c6dd6ba874p@chr15:101282110..101282113, +
5.42e-195FFCP PHASE1:Hg19::chr10:5660248..5660254,-#_cc9520f1613fb31927ab60c6dd6ba874p2@ENST00000427341
5.42e-195FFCP PHASE2:Hg19::chr10:5660248..5660254,-#_cc9520f1613fb31927ab60c6dd6ba874p2@ENST00000427341
5.42e-195FFCP PHASE2:Hg19::chr15:101282110..101282113,+#_cc9520f1613fb31927ab60c6dd6ba874p@chr15:101282110..101282113, +
9.37e-99FFCP PHASE1:Hg19::chr6:21666284..21666297,+#_ed7335f58aa894a79ca156134da8d133p26@LINC00340
9.37e-99FFCP PHASE2:Hg19::chr6:21664489..21664494,+#_ed7335f58aa894a79ca156134da8d133p@chr6:21664489..21664494, +
9.37e-99FFCP PHASE2:Hg19::chr6:21666284..21666297,+#_ed7335f58aa894a79ca156134da8d133p26@LINC00340
9.37e-99FFCP PHASE1:Hg19::chr6:21383702..21383704,+#_ed7335f58aa894a79ca156134da8d133p@chr6:21383702..21383704, +
9.37e-99FFCP PHASE2:Hg19::chr6:21383702..21383704,+#_ed7335f58aa894a79ca156134da8d133p@chr6:21383702..21383704, +
9.37e-99FFCP PHASE1:Hg19::chr21:39627877..39627884,+#_ed7335f58aa894a79ca156134da8d133p@chr21:39627877..39627884, +
9.37e-99FFCP PHASE1:Hg19::chr6:21588091..21588098,-#_ed7335f58aa894a79ca156134da8d133p@chr6:21588091..21588098, -
9.37e-99FFCP PHASE1:Hg19::chr3:13992334..13992338,-#_ed7335f58aa894a79ca156134da8d133p@chr3:13992334..13992338, -
9.37e-99FFCP PHASE2:Hg19::chr6:21588091..21588098,-#_ed7335f58aa894a79ca156134da8d133p@chr6:21588091..21588098, -
9.37e-99FFCP PHASE2:Hg19::chr21:39627877..39627884,+#_ed7335f58aa894a79ca156134da8d133p@chr21:39627877..39627884, +
9.37e-99FFCP PHASE2:Hg19::chr3:13992334..13992338,-#_ed7335f58aa894a79ca156134da8d133p@chr3:13992334..13992338, -
9.37e-99FFCP PHASE1:Hg19::chr6:21664489..21664494,+#_ed7335f58aa894a79ca156134da8d133p@chr6:21664489..21664494, +
2.55e-98FFCP PHASE1:Hg19::chr1:233430709..233430711,+#_6eabf29724e30aefa53bc3d97b1e3934p@chr1:233430709..233430711, +
2.55e-98FFCP PHASE1:Hg19::chr6:21876977..21876981,+#_6eabf29724e30aefa53bc3d97b1e3934p@chr6:21876977..21876981, +
2.55e-98FFCP PHASE2:Hg19::chr1:233430709..233430711,+#_6eabf29724e30aefa53bc3d97b1e3934p@chr1:233430709..233430711, +
2.55e-98FFCP PHASE2:Hg19::chr6:21876977..21876981,+#_6eabf29724e30aefa53bc3d97b1e3934p@chr6:21876977..21876981, +
1.23e-66FFCP PHASE1:Hg19::chr6:21664412..21664419,+#_a65c16c814d9e5421dd2fd68a61e8e59p@chr6:21664412..21664419, +
1.23e-66FFCP PHASE2:Hg19::chr6:21664412..21664419,+#_a65c16c814d9e5421dd2fd68a61e8e59p@chr6:21664412..21664419, +
1.23e-66FFCP PHASE2:Hg19::chr13:96459990..96459992,+#_a65c16c814d9e5421dd2fd68a61e8e59p@chr13:96459990..96459992, +
1.23e-66FFCP PHASE1:Hg19::chr13:96459990..96459992,+#_a65c16c814d9e5421dd2fd68a61e8e59p@chr13:96459990..96459992, +
2.39e-66FFCP PHASE1:Hg19::chr15:79296342..79296353,-#_a23b7aaad2e100eeff9cd1b32260363ep@chr15:79296342..79296353, -
2.39e-66FFCP PHASE2:Hg19::chr11:69867053..69867065,-#_a23b7aaad2e100eeff9cd1b32260363ep2@ENST00000528507
2.39e-66FFCP PHASE2:Hg19::chr2:176971270..176971277,-#_a23b7aaad2e100eeff9cd1b32260363ep@chr2:176971270..176971277, -
2.39e-66FFCP PHASE1:Hg19::chr6:20534754..20534756,-#_a23b7aaad2e100eeff9cd1b32260363ep@chr6:20534754..20534756, -
2.39e-66FFCP PHASE2:Hg19::chr6:20534754..20534756,-#_a23b7aaad2e100eeff9cd1b32260363ep@chr6:20534754..20534756, -
2.39e-66FFCP PHASE1:Hg19::chr2:176971270..176971277,-#_a23b7aaad2e100eeff9cd1b32260363ep@chr2:176971270..176971277, -
2.39e-66FFCP PHASE2:Hg19::chr15:79296342..79296353,-#_a23b7aaad2e100eeff9cd1b32260363ep@chr15:79296342..79296353, -
2.39e-66FFCP PHASE1:Hg19::chr11:69867053..69867065,-#_a23b7aaad2e100eeff9cd1b32260363ep2@ENST00000528507
4.66e-66FFCP PHASE1:Hg19::chr11:92613787..92613796,+#_0188ba23718b5e09fc0d07bc1b3c42e7p@chr11:92613787..92613796, +
4.66e-66FFCP PHASE2:Hg19::chr15:40544787..40544798,+#_0188ba23718b5e09fc0d07bc1b3c42e7p23@PAK6
4.66e-66FFCP PHASE1:Hg19::chr14:80855894..80855900,+#_0188ba23718b5e09fc0d07bc1b3c42e7p@chr14:80855894..80855900, +
4.66e-66FFCP PHASE2:Hg19::chr14:80855894..80855900,+#_0188ba23718b5e09fc0d07bc1b3c42e7p@chr14:80855894..80855900, +
4.66e-66FFCP PHASE2:Hg19::chr11:92613787..92613796,+#_0188ba23718b5e09fc0d07bc1b3c42e7p@chr11:92613787..92613796, +
4.66e-66FFCP PHASE1:Hg19::chr15:40544787..40544798,+#_0188ba23718b5e09fc0d07bc1b3c42e7p23@PAK6
1.46e-50FFCP PHASE1:Hg19::chr6:21022855..21022892,+#_5a6355c216b7f48cc79a7b3f89ccfc64+, p@chr6:21022855..21022892
1.46e-50FFCP PHASE2:Hg19::chr6:21022855..21022892,+#_5a6355c216b7f48cc79a7b3f89ccfc64p@chr6:21022855..21022892, +
1.46e-50FFCP PHASE1:Hg19::chr6:21665113..21665128,-#_5a6355c216b7f48cc79a7b3f89ccfc64p@chr6:21665113..21665128, -
1.46e-50FFCP PHASE2:Hg19::chr6:21665113..21665128,-#_5a6355c216b7f48cc79a7b3f89ccfc64p@chr6:21665113..21665128, -
1.46e-50FFCP PHASE1:Hg19::chr6:21665769..21665780,+#_5a6355c216b7f48cc79a7b3f89ccfc64p@chr6:21665769..21665780, +
1.46e-50FFCP PHASE2:Hg19::chr6:21665769..21665780,+#_5a6355c216b7f48cc79a7b3f89ccfc64+, p@chr6:21665769..21665780
3.99e-50FFCP PHASE1:Hg19::chr17:4699695..4699699,-#_622fdeb0d6072c93c89e99ac5a0bdb66p@chr17:4699695..4699699, -
3.99e-50FFCP PHASE2:Hg19::chr17:4699695..4699699,-#_622fdeb0d6072c93c89e99ac5a0bdb66p@chr17:4699695..4699699, -
9.91e-41FFCP PHASE2:Hg19::chr6:22221030..22221034,+#_27223be3577906981a022a6370aa0461p1@AL117559
9.91e-41FFCP PHASE2:Hg19::chr10:30046722..30046725,-#_27223be3577906981a022a6370aa0461p@chr10:30046722..30046725, -
9.91e-41FFCP PHASE1:Hg19::chr10:30046722..30046725,-#_27223be3577906981a022a6370aa0461p@chr10:30046722..30046725, -
9.91e-41FFCP PHASE2:Hg19::chr5:57555322..57555334,-#_27223be3577906981a022a6370aa0461p@chr5:57555322..57555334, -
9.91e-41FFCP PHASE1:Hg19::chr5:57555322..57555334,-#_27223be3577906981a022a6370aa0461p@chr5:57555322..57555334, -
9.91e-41FFCP PHASE1:Hg19::chr6:22221030..22221034,+#_27223be3577906981a022a6370aa0461p1@AL117559
1.48e-40FFCP PHASE2:Hg19::chr17:2264983..2264992,+#_4ba98de282bb3209c12193f71c27b4b3p@chr17:2264983..2264992, +
1.48e-40FFCP PHASE2:Hg19::chr10:30151938..30151956,-#_4ba98de282bb3209c12193f71c27b4b3p@chr10:30151938..30151956, -
1.48e-40FFCP PHASE1:Hg19::chr10:30151938..30151956,-#_4ba98de282bb3209c12193f71c27b4b3-, p@chr10:30151938..30151956
1.48e-40FFCP PHASE1:Hg19::chr17:2264983..2264992,+#_4ba98de282bb3209c12193f71c27b4b3p@chr17:2264983..2264992, +
3.3e-40FFCP PHASE1:Hg19::chr19:48102065..48102072,+#_8bbb820e573247695dab06bdc825e9d4p@chr19:48102065..48102072, +
3.3e-40FFCP PHASE1:Hg19::chr15:101417937..101417955,+#_8bbb820e573247695dab06bdc825e9d4p8@ALDH1A3
3.3e-40FFCP PHASE2:Hg19::chr19:48102065..48102072,+#_8bbb820e573247695dab06bdc825e9d4p@chr19:48102065..48102072, +
3.3e-40FFCP PHASE2:Hg19::chr15:101417937..101417955,+#_8bbb820e573247695dab06bdc825e9d4p8@ALDH1A3
1.84e-34FFCP PHASE2:Hg19::chr6:21680979..21680984,+#_a14998072651e16513f78834ad3f8712p@chr6:21680979..21680984, +
1.84e-34FFCP PHASE1:Hg19::chr6:21680979..21680984,+#_a14998072651e16513f78834ad3f8712p@chr6:21680979..21680984, +
2.58e-34FFCP PHASE2:Hg19::chr4:183752843..183752848,+#_fd76cfa9c2e8a79bc000724fe024f07bp@chr4:183752843..183752848, +
2.58e-34FFCP PHASE1:Hg19::chr2:177042702..177042725,-#_fd76cfa9c2e8a79bc000724fe024f07bp2@uc002uku.2
2.58e-34FFCP PHASE2:Hg19::chr2:177042702..177042725,-#_fd76cfa9c2e8a79bc000724fe024f07bp2@uc002uku.2
2.58e-34FFCP PHASE1:Hg19::chr4:183752843..183752848,+#_fd76cfa9c2e8a79bc000724fe024f07bp@chr4:183752843..183752848, +
2.58e-34FFCP PHASE1:Hg19::chr6:21070033..21070038,+#_fd76cfa9c2e8a79bc000724fe024f07bp@chr6:21070033..21070038, +
2.58e-34FFCP PHASE2:Hg19::chr6:21070033..21070038,+#_fd76cfa9c2e8a79bc000724fe024f07bp@chr6:21070033..21070038, +
3.61e-34FFCP PHASE1:Hg19::chr6:22047883..22047886,+#_fc0048b520e58289799a338b420c3791p@chr6:22047883..22047886, +
3.61e-34FFCP PHASE2:Hg19::chr6:22047883..22047886,+#_fc0048b520e58289799a338b420c3791p@chr6:22047883..22047886, +
5.05e-34FFCP PHASE2:Hg19::chr19:34618510..34618515,-#_6c98ed27a30f2c6776fdba689154d1fep@chr19:34618510..34618515, -
5.05e-34FFCP PHASE1:Hg19::chr19:34618510..34618515,-#_6c98ed27a30f2c6776fdba689154d1fep@chr19:34618510..34618515, -
7.48e-30FFCP PHASE1:Hg19::chr1:52629146..52629156,-#_37ecf1c274aa80dec56f2d65d3f6b4acp1@ENST00000412785
7.48e-30FFCP PHASE2:Hg19::chr6:20402608..20402629,+#_37ecf1c274aa80dec56f2d65d3f6b4acp13@E2F3
7.48e-30FFCP PHASE2:Hg19::chr1:52629146..52629156,-#_37ecf1c274aa80dec56f2d65d3f6b4acp1@ENST00000412785
7.48e-30FFCP PHASE1:Hg19::chr6:21665095..21665110,-#_37ecf1c274aa80dec56f2d65d3f6b4acp@chr6:21665095..21665110, -
7.48e-30FFCP PHASE2:Hg19::chr6:21665095..21665110,-#_37ecf1c274aa80dec56f2d65d3f6b4acp@chr6:21665095..21665110, -
7.48e-30FFCP PHASE2:Hg19::chr5:54179495..54179507,+#_37ecf1c274aa80dec56f2d65d3f6b4acp@chr5:54179495..54179507, +
7.48e-30FFCP PHASE1:Hg19::chr5:54179495..54179507,+#_37ecf1c274aa80dec56f2d65d3f6b4acp@chr5:54179495..54179507, +
7.48e-30FFCP PHASE1:Hg19::chr6:20402608..20402629,+#_37ecf1c274aa80dec56f2d65d3f6b4acp13@E2F3
2.37e-29FFCP PHASE1:Hg19::chr2:109605543..109605554,-#_679297234cdb21ecf3de2304e6febac6p4@EDAR
2.37e-29FFCP PHASE2:Hg19::chr6:161454984..161455010,+#_679297234cdb21ecf3de2304e6febac6p14@MAP3K4
2.37e-29FFCP PHASE2:Hg19::chr2:109605543..109605554,-#_679297234cdb21ecf3de2304e6febac6p4@EDAR
2.37e-29FFCP PHASE1:Hg19::chr6:161454984..161455010,+#_679297234cdb21ecf3de2304e6febac6p14@MAP3K4
4.2e-29FFCP PHASE1:Hg19::chrX:104100378..104100381,+#_d9edb038a35017a44793d3cd69236b1cp@chrX:104100378..104100381, +
4.2e-29FFCP PHASE2:Hg19::chrX:104100378..104100381,+#_d9edb038a35017a44793d3cd69236b1cp@chrX:104100378..104100381, +
2.78e-26FFCP PHASE2:Hg19::chr13:107029084..107029103,+#_fd72cab72677c159d6c5fad0088b9b8dp4@LINC00460
2.78e-26FFCP PHASE1:Hg19::chr13:107029084..107029103,+#_fd72cab72677c159d6c5fad0088b9b8dp4@LINC00460
2.78e-26FFCP PHASE1:Hg19::chr6:21933119..21933123,+#_fd72cab72677c159d6c5fad0088b9b8dp@chr6:21933119..21933123, +
2.78e-26FFCP PHASE2:Hg19::chr6:21933119..21933123,+#_fd72cab72677c159d6c5fad0088b9b8dp@chr6:21933119..21933123, +
3.58e-26FFCP PHASE1:Hg19::chr3:104180688..104180692,+#_42f8940ad50d4e840932b576a97741bdp@chr3:104180688..104180692, +
3.58e-26FFCP PHASE2:Hg19::chr3:104180688..104180692,+#_42f8940ad50d4e840932b576a97741bdp@chr3:104180688..104180692, +
4.61e-26FFCP PHASE2:Hg19::chr1:12239065..12239070,-#_e91645cffc493458402d908ef13beec6p@chr1:12239065..12239070, -
4.61e-26FFCP PHASE1:Hg19::chr9:93960724..93960730,+#_e91645cffc493458402d908ef13beec6p@chr9:93960724..93960730, +
4.61e-26FFCP PHASE1:Hg19::chr1:12239065..12239070,-#_e91645cffc493458402d908ef13beec6p@chr1:12239065..12239070, -
4.61e-26FFCP PHASE2:Hg19::chr9:93960724..93960730,+#_e91645cffc493458402d908ef13beec6p@chr9:93960724..93960730, +
4.61e-26FFCP PHASE2:Hg19::chr15:101418003..101418019,+#_e91645cffc493458402d908ef13beec6p5@ALDH1A3
4.61e-26FFCP PHASE1:Hg19::chr7:121156367..121156370,-#_e91645cffc493458402d908ef13beec6p@chr7:121156367..121156370, -
4.61e-26FFCP PHASE1:Hg19::chr15:101418003..101418019,+#_e91645cffc493458402d908ef13beec6p5@ALDH1A3
4.61e-26FFCP PHASE2:Hg19::chr7:121156367..121156370,-#_e91645cffc493458402d908ef13beec6p@chr7:121156367..121156370, -