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UBERON:0005428

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Name:vagal neural crest
Namespace:FANTOM
Definition:"Vagal neural crest is adjacent to the first seven somites gives rise to both ganglionic and ectomesenchymal derivatives[ZFA]." [ZFIN:curator]
Xrefs:
links:

EHDAA2:0002156
EHDAA:669
TAO:0000818
VHOG:0001208
XAO:0004191

ZFA:0000818
Synonyms: "post-otic neural crest" EXACT [ZFA:0000818]
Subset: vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0004121(ectoderm-derived structure),UBERON:0005291(embryonic tissue)
part_of:UBERON:0002342(neural crest)



Children

develops from:UBERON:0002005 (enteric nervous system)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005428 (vagal neural crest), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr6:52158594..52158603,-#_89c72bd5a98e952a8fc8003a417d1e10p@chr6:52158594..52158603, -
1.58e-86FFCP PHASE1:Mm9::chr6:52158594..52158603,-#_89c72bd5a98e952a8fc8003a417d1e10p@chr6:52158594..52158603, -
6.04e-65FFCP PHASE2:Mm9::chr4:152858080..152858084,-#_8a91fcfafc727ffb1e9910d7045eb73bp@chr4:152858080..152858084, -
6.04e-65FFCP PHASE1:Mm9::chr4:152858080..152858084,-#_8a91fcfafc727ffb1e9910d7045eb73bp@chr4:152858080..152858084, -
3.28e-58FFCP PHASE2:Mm9::chr7:143239748..143239753,+#_4f87dc3010366a331a0333cf03997cc9p@chr7:143239748..143239753, +
3.28e-58FFCP PHASE1:Mm9::chr7:143239748..143239753,+#_4f87dc3010366a331a0333cf03997cc9p@chr7:143239748..143239753, +
1.18e-44FFCP PHASE2:Mm9::chr1:88008549..88008559,-#_66bad8e94ffc42df5e46414218393752p4@Htr2b
1.18e-44FFCP PHASE1:Mm9::chr1:88008549..88008559,-#_66bad8e94ffc42df5e46414218393752p4@Htr2b
3.27e-44FFCP PHASE2:Mm9::chr2:74583733..74583738,+#_a8416a0dd040e6bb56cfe13778034acbp13@Hoxd3
3.27e-44FFCP PHASE1:Mm9::chr2:74583733..74583738,+#_a8416a0dd040e6bb56cfe13778034acbp13@Hoxd3
4.58e-44FFCP PHASE1:Mm9::chr13:96388617..96388624,-#_275ca3b6d6739077afb437785920d1cdp4@F2r
4.58e-44FFCP PHASE2:Mm9::chr13:96388617..96388624,-#_275ca3b6d6739077afb437785920d1cdp4@F2r
8.97e-44FFCP PHASE2:Mm9::chr5:88358803..88358820,+#_6ab279c7f6069716194237f1c35d4c43p@chr5:88358803..88358820, +
8.97e-44FFCP PHASE1:Mm9::chr5:88358803..88358820,+#_6ab279c7f6069716194237f1c35d4c43p@chr5:88358803..88358820, +
4.15e-39FFCP PHASE2:Mm9::chr11:4397590..4397595,-#_f9d6aa92f20996e0a042e99579aff684p@chr11:4397590..4397595, -
4.15e-39FFCP PHASE1:Mm9::chr11:4397590..4397595,-#_f9d6aa92f20996e0a042e99579aff684p@chr11:4397590..4397595, -
1.17e-38FFCP PHASE2:Mm9::chr9:35352286..35352290,-#_8ec495b5ad566e7fba67583c7c17cbbfp@chr9:35352286..35352290, -
1.17e-38FFCP PHASE1:Mm9::chr9:35352286..35352290,-#_8ec495b5ad566e7fba67583c7c17cbbfp@chr9:35352286..35352290, -
1.56e-38FFCP PHASE2:Mm9::chr15:102928215..102928218,-#_a9188c4443a5f539153ed5c2cc7c83d4p@chr15:102928215..102928218, -
1.56e-38FFCP PHASE1:Mm9::chr15:102928215..102928218,-#_a9188c4443a5f539153ed5c2cc7c83d4p@chr15:102928215..102928218, -
3.73e-38FFCP PHASE2:Mm9::chr11:96164868..96164875,+#_f0f4d188f761066804abae49b6e64c9fp5@Hoxb5
3.73e-38FFCP PHASE1:Mm9::chr11:96164868..96164875,+#_f0f4d188f761066804abae49b6e64c9fp5@Hoxb5
4.98e-38FFCP PHASE1:Mm9::chr11:96176093..96176104,+#_4e940bad2ded93fb3c5bc88ff4a7da40p@chr11:96176093..96176104, +
4.98e-38FFCP PHASE2:Mm9::chr11:96176093..96176104,+#_4e940bad2ded93fb3c5bc88ff4a7da40p@chr11:96176093..96176104, +
3.67e-34FFCP PHASE1:Mm9::chr8:11952680..11952690,+#_03336e3e9352f72a4f83ec34105fc42dp@chr8:11952680..11952690, +
3.67e-34FFCP PHASE2:Mm9::chr8:11952680..11952690,+#_03336e3e9352f72a4f83ec34105fc42dp@chr8:11952680..11952690, +
4.74e-34FFCP PHASE1:Mm9::chr16:5855821..5855836,+#_218020c519a0e133bf598def34f646a5p@chr16:5855821..5855836, +
4.74e-34FFCP PHASE2:Mm9::chr16:5855821..5855836,+#_218020c519a0e133bf598def34f646a5p@chr16:5855821..5855836, +
4.74e-34FFCP PHASE2:Mm9::chr10:90644180..90644195,-#_218020c519a0e133bf598def34f646a5p@chr10:90644180..90644195, -
4.74e-34FFCP PHASE1:Mm9::chr10:90644180..90644195,-#_218020c519a0e133bf598def34f646a5p@chr10:90644180..90644195, -
6.12e-34FFCP PHASE2:Mm9::chr2:31305411..31305419,+#_75d58b906619716caa97abcb68372fa2p@chr2:31305411..31305419, +
6.12e-34FFCP PHASE1:Mm9::chr2:31305411..31305419,+#_75d58b906619716caa97abcb68372fa2p@chr2:31305411..31305419, +
1.69e-33FFCP PHASE1:Mm9::chr16:5855860..5855872,+#_476d24dd2355920a9240dd5fc405081bp@chr16:5855860..5855872, +
1.69e-33FFCP PHASE2:Mm9::chr16:5855860..5855872,+#_476d24dd2355920a9240dd5fc405081bp@chr16:5855860..5855872, +
9.86e-33FFCP PHASE2:Mm9::chr12:88020400..88020411,+#_6c7085c0ebd12b1879ff6b5eb3c98570p@chr12:88020400..88020411, +
9.86e-33FFCP PHASE1:Mm9::chr12:88020400..88020411,+#_6c7085c0ebd12b1879ff6b5eb3c98570p@chr12:88020400..88020411, +
1.16e-30FFCP PHASE1:Mm9::chr6:52158693..52158704,-#_aca926e7c508c00d4db9b40efe4f1c45p3@Hoxa6
1.16e-30FFCP PHASE2:Mm9::chr6:52158693..52158704,-#_aca926e7c508c00d4db9b40efe4f1c45p3@Hoxa6
4.54e-30FFCP PHASE1:Mm9::chr11:113795301..113795315,+#_4f25c63127e0afc7fd14d9ce18e50702p@chr11:113795301..113795315, +
4.54e-30FFCP PHASE1:Mm9::chr11:96168366..96168369,+#_4f25c63127e0afc7fd14d9ce18e50702p@chr11:96168366..96168369, +
4.54e-30FFCP PHASE2:Mm9::chr11:96168366..96168369,+#_4f25c63127e0afc7fd14d9ce18e50702p@chr11:96168366..96168369, +
4.54e-30FFCP PHASE2:Mm9::chr11:113795301..113795315,+#_4f25c63127e0afc7fd14d9ce18e50702p@chr11:113795301..113795315, +
5.61e-30FFCP PHASE1:Mm9::chr14:20570183..20570190,+#_406e42c4a907edb4a36786af1b069949p3@Nid2
5.61e-30FFCP PHASE2:Mm9::chr14:20570183..20570190,+#_406e42c4a907edb4a36786af1b069949p3@Nid2
5.7e-30FFCP PHASE1:Mm9::chr8:11782453..11782481,+#_29b7dd66fc292b9da8bb634849cec2acp25@Arhgef7
5.7e-30FFCP PHASE2:Mm9::chr8:11782453..11782481,+#_29b7dd66fc292b9da8bb634849cec2acp25@Arhgef7
7.14e-30FFCP PHASE2:Mm9::chr7:98820891..98820900,+#_5a3cea0772a738e98750b5d1597e7277p34@Dlg2
7.14e-30FFCP PHASE1:Mm9::chr7:98820891..98820900,+#_5a3cea0772a738e98750b5d1597e7277p34@Dlg2
1.12e-29FFCP PHASE2:Mm9::chr6:118116455..118116458,-#_d3b74809e2c6087195ec6464d4db340bp@chr6:118116455..118116458, -
1.12e-29FFCP PHASE1:Mm9::chr6:118116455..118116458,-#_d3b74809e2c6087195ec6464d4db340bp@chr6:118116455..118116458, -
1.4e-29FFCP PHASE2:Mm9::chr2:119624214..119624225,+#_639dc1233d29399dfb97a79c3dbed821p7@Tyro3
1.4e-29FFCP PHASE1:Mm9::chr2:119624214..119624225,+#_639dc1233d29399dfb97a79c3dbed821p7@Tyro3
1.54e-29FFCP PHASE2:Mm9::chr1:88007341..88007350,-#_dc8213fe51728d070d6cedb02fdacbbdp7@Htr2b
1.54e-29FFCP PHASE1:Mm9::chr1:88007341..88007350,-#_dc8213fe51728d070d6cedb02fdacbbdp7@Htr2b
1.54e-29FFCP PHASE2:Mm9::chr5:88358878..88358890,+#_dc8213fe51728d070d6cedb02fdacbbdp@chr5:88358878..88358890, +
1.54e-29FFCP PHASE1:Mm9::chr5:88358878..88358890,+#_dc8213fe51728d070d6cedb02fdacbbdp@chr5:88358878..88358890, +
2.19e-29FFCP PHASE1:Mm9::chr15:90848413..90848436,-#_92966c00140aac260affb926fa8e6415p@chr15:90848413..90848436, -
2.19e-29FFCP PHASE2:Mm9::chr15:90848413..90848436,-#_92966c00140aac260affb926fa8e6415p@chr15:90848413..90848436, -
3.42e-29FFCP PHASE2:Mm9::chr9:20777404..20777418,+#_f482764d60e839ec13c2e84edf1fbc24p@chr9:20777404..20777418, +
3.42e-29FFCP PHASE1:Mm9::chr9:20777404..20777418,+#_f482764d60e839ec13c2e84edf1fbc24p@chr9:20777404..20777418, +
7.38e-28FFCP PHASE2:Mm9::chr6:52134126..52134150,-#_9b71565ef4b7a8a5e2e2a0a8f100bab2p3@Hoxa3
7.38e-28FFCP PHASE1:Mm9::chr6:52134126..52134150,-#_9b71565ef4b7a8a5e2e2a0a8f100bab2p3@Hoxa3
9.07e-28FFCP PHASE2:Mm9::chr11:106874215..106874219,+#_ce433702a04463223be4f26281843a8cp@chr11:106874215..106874219, +
9.07e-28FFCP PHASE1:Mm9::chr11:106874215..106874219,+#_ce433702a04463223be4f26281843a8cp@chr11:106874215..106874219, +
1.11e-27FFCP PHASE2:Mm9::chr5:46030754..46030764,-#_c0bdeb625e091d8e26668bfbac28397cp9@Fam184b
1.11e-27FFCP PHASE1:Mm9::chr5:46030754..46030764,-#_c0bdeb625e091d8e26668bfbac28397cp9@Fam184b
1.37e-27FFCP PHASE1:Mm9::chr11:96175972..96175978,+#_595c3eb439d97647967a4d3fa21345a3p@chr11:96175972..96175978, +
1.37e-27FFCP PHASE2:Mm9::chr11:96175972..96175978,+#_595c3eb439d97647967a4d3fa21345a3p@chr11:96175972..96175978, +
2.06e-27FFCP PHASE2:Mm9::chr5:67486110..67486118,-#_e1f0e509839fd2bbfc2f18b19551f97ap@chr5:67486110..67486118, -
2.06e-27FFCP PHASE1:Mm9::chr5:67486110..67486118,-#_e1f0e509839fd2bbfc2f18b19551f97ap@chr5:67486110..67486118, -
5.7e-27FFCP PHASE1:Mm9::chr1:65358027..65358031,+#_69552ed19a4bdba9422d9edcaa2ddb8cp1@Pth2r
5.7e-27FFCP PHASE2:Mm9::chr1:65358027..65358031,+#_69552ed19a4bdba9422d9edcaa2ddb8cp1@Pth2r
8.55e-27FFCP PHASE2:Mm9::chr3:59108872..59108875,+#_73cdc8ce27d2d49078fd92254ac5c613p@chr3:59108872..59108875, +
8.55e-27FFCP PHASE1:Mm9::chr3:59108872..59108875,+#_73cdc8ce27d2d49078fd92254ac5c613p@chr3:59108872..59108875, +
3.49e-26FFCP PHASE2:Mm9::chr1:94648758..94648763,+#_bcd3fef84c885386fedb0dad9f74f929p@chr1:94648758..94648763, +
3.49e-26FFCP PHASE1:Mm9::chr1:94648758..94648763,+#_bcd3fef84c885386fedb0dad9f74f929p@chr1:94648758..94648763, +
5.19e-26FFCP PHASE2:Mm9::chr1:112856387..112856393,-#_18f6e94397be61627d9bca81066338a1p@chr1:112856387..112856393, -
5.19e-26FFCP PHASE1:Mm9::chr1:112856387..112856393,-#_18f6e94397be61627d9bca81066338a1p@chr1:112856387..112856393, -
1.46e-25FFCP PHASE2:Mm9::chr11:96164887..96164894,+#_3aebd940b641d26b46eeb5e37372a31ep4@Hoxb5
1.46e-25FFCP PHASE1:Mm9::chr11:96164887..96164894,+#_3aebd940b641d26b46eeb5e37372a31ep4@Hoxb5
4.47e-25FFCP PHASE1:Mm9::chr2:67492047..67492052,+#_17fef2ace03e272b17fd485ad77e27aep@chr2:67492047..67492052, +
4.47e-25FFCP PHASE2:Mm9::chr2:67492047..67492052,+#_17fef2ace03e272b17fd485ad77e27aep@chr2:67492047..67492052, +
6.49e-25FFCP PHASE2:Mm9::chr2:74583741..74583750,+#_1002a4387ae773569b5e224ec021c2a0p10@Hoxd3
6.49e-25FFCP PHASE1:Mm9::chr2:74583741..74583750,+#_1002a4387ae773569b5e224ec021c2a0p10@Hoxd3
7.81e-25FFCP PHASE1:Mm9::chr2:119586145..119586157,-#_9ab4a869e5ec093a9cc671974b9a9998p2@Ltk
7.81e-25FFCP PHASE2:Mm9::chr2:119586145..119586157,-#_9ab4a869e5ec093a9cc671974b9a9998p2@Ltk
1.13e-24FFCP PHASE2:Mm9::chr11:96165338..96165355,+#_454afc776771dc9d260d1791221d28b4p@chr11:96165338..96165355, +
1.13e-24FFCP PHASE1:Mm9::chr11:96165338..96165355,+#_454afc776771dc9d260d1791221d28b4p@chr11:96165338..96165355, +
1.63e-24FFCP PHASE2:Mm9::chr7:38151719..38151721,-#_1c544a645bbd8660515d869ec958159fp@chr7:38151719..38151721, -
1.63e-24FFCP PHASE1:Mm9::chr7:38151719..38151721,-#_1c544a645bbd8660515d869ec958159fp@chr7:38151719..38151721, -
4.9e-24FFCP PHASE2:Mm9::chr12:100139521..100139532,-#_b49623208d60cc7ae476d6af32680f5cp4@Eml5
4.9e-24FFCP PHASE1:Mm9::chr12:100139521..100139532,-#_b49623208d60cc7ae476d6af32680f5cp4@Eml5
5.11e-24FFCP PHASE1:Mm9::chr8:26610056..26610057,-#_e43fcaebd3f137838953ef9d94cd7017p@chr8:26610056..26610057, -
5.11e-24FFCP PHASE2:Mm9::chr8:26610056..26610057,-#_e43fcaebd3f137838953ef9d94cd7017p@chr8:26610056..26610057, -
6.68e-24FFCP PHASE1:Mm9::chr5:88358947..88358973,+#_e2c924d442f1aa3dca67f1359442fa0ep@chr5:88358947..88358973, +
6.68e-24FFCP PHASE2:Mm9::chr5:88358947..88358973,+#_e2c924d442f1aa3dca67f1359442fa0ep@chr5:88358947..88358973, +
1.19e-23FFCP PHASE1:Mm9::chr8:11913012..11913024,+#_82a7dcfa99516e31371e380cc0dc5da5p@chr8:11913012..11913024, +
1.19e-23FFCP PHASE2:Mm9::chr8:11913012..11913024,+#_82a7dcfa99516e31371e380cc0dc5da5p@chr8:11913012..11913024, +
1.21e-23FFCP PHASE2:Mm9::chr9:42209759..42209780,-#_b22fc76b9062a14f3441498c765ca84ep@chr9:42209759..42209780, -
1.21e-23FFCP PHASE1:Mm9::chr9:42209759..42209780,-#_b22fc76b9062a14f3441498c765ca84ep@chr9:42209759..42209780, -










Property "Property value" (as page type) with input value "UBPROP:0000001 "Vagal neural crest is adjacent to the first seven somites gives rise to both ganglionic and ectomesenchymal derivatives.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.