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UBERON:0007524

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Name:dense mesenchyme tissue
Namespace:FANTOM
Definition:"Mesenchyme with little extracellular matrix." [AEO:JB]
Xrefs:
links:

AEO:0000146

EHDAA2:0003146
Alt_id: EHDAA2:0003146

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0003104(mesenchyme)



Children

is a:UBERON:0003077 (paraxial mesoderm),UBERON:0003081 (lateral plate mesoderm),UBERON:0005728 (extraembryonic mesoderm),UBERON:0005856 (developing mesenchymal condensation),UBERON:0009494 (pharyngeal arch mesenchymal region),UBERON:0010046 (entire pharyngeal arch associated mesenchyme),UBERON:0010349 (otic capsule pre-cartilage condensation)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007524 (dense mesenchyme tissue), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.34e-47FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_9ad587a0ecdf70216504a40cac499987p@chrX:160838683..160838694, +
1.34e-47FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_9ad587a0ecdf70216504a40cac499987p@chrX:160838683..160838694, +
4.66e-43FFCP PHASE2:Hg19::chr10:49813077..49813087,-#_c4a324db047a1449c3bd02cc07b433a6p8@ARHGAP22
4.66e-43FFCP PHASE1:Hg19::chr10:49813077..49813087,-#_c4a324db047a1449c3bd02cc07b433a6p8@ARHGAP22
5.06e-41FFCP PHASE1:Mm9::chrX:65748600..65748616,+#_9dd075e170658a0868803c0cb69acb8ap@chrX:65748600..65748616, +
5.06e-41FFCP PHASE2:Mm9::chrX:65748600..65748616,+#_9dd075e170658a0868803c0cb69acb8ap@chrX:65748600..65748616, +
5.06e-41FFCP PHASE2:Mm9::chr12:105433069..105433075,-#_9dd075e170658a0868803c0cb69acb8ap@chr12:105433069..105433075, -
5.06e-41FFCP PHASE1:Mm9::chr12:105433069..105433075,-#_9dd075e170658a0868803c0cb69acb8ap@chr12:105433069..105433075, -
6.64e-40FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_00f42557a07ea92897bb17c08675ec19p@chrX:160838787..160838800, +
6.64e-40FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_00f42557a07ea92897bb17c08675ec19p@chrX:160838787..160838800, +
1.53e-39FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_6d2b4c3a31826fc626877913702fbc42p@chr6:53359400..53359406, +
1.53e-39FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_6d2b4c3a31826fc626877913702fbc42+, p@chr6:53359400..53359406
3.42e-39FFCP PHASE1:Hg19::chr9:35685631..35685657,+#_c67ba370979111da12e8eb665abe7b9ep@chr9:35685631..35685657, +
3.42e-39FFCP PHASE2:Hg19::chr9:35685631..35685657,+#_c67ba370979111da12e8eb665abe7b9ep@chr9:35685631..35685657, +
2.46e-38FFCP PHASE2:Hg19::chr6:148593425..148593498,+#_fec5f8d43843737bc8d83d10b6d0265bp2@SASH1
2.46e-38FFCP PHASE1:Hg19::chr6:148593425..148593498,+#_fec5f8d43843737bc8d83d10b6d0265bp2@SASH1
5.1e-38FFCP PHASE1:Hg19::chr10:49813051..49813064,-#_15db150f8e5ec797f3eb45832bad1442p4@ARHGAP22
5.1e-38FFCP PHASE2:Hg19::chr10:49813051..49813064,-#_15db150f8e5ec797f3eb45832bad1442p4@ARHGAP22
6.65e-36FFCP PHASE1:Mm9::chr11:81849982..81850000,+#_8c6eff17d4657d673d4cb7c5e6586d8dp@chr11:81849982..81850000, +
6.65e-36FFCP PHASE2:Mm9::chr11:81849982..81850000,+#_8c6eff17d4657d673d4cb7c5e6586d8dp@chr11:81849982..81850000, +
3.33e-35FFCP PHASE2:Hg19::chr10:49813013..49813032,-#_a23f53d9db134657edf97b0bd61e0957p3@ARHGAP22
3.33e-35FFCP PHASE1:Hg19::chr10:49813013..49813032,-#_a23f53d9db134657edf97b0bd61e0957p3@ARHGAP22
2.15e-34FFCP PHASE2:Hg19::chr9:35685445..35685517,+#_eb51496902aa8c9c8e4ebab8f592d779p@chr9:35685445..35685517, +
2.15e-34FFCP PHASE1:Hg19::chr9:35685445..35685517,+#_eb51496902aa8c9c8e4ebab8f592d779p@chr9:35685445..35685517, +
3.86e-34FFCP PHASE1:Hg19::chr9:35684475..35684520,+#_7c5aa72c10927979627e8c3e0e564f66p@chr9:35684475..35684520, +
3.86e-34FFCP PHASE2:Hg19::chr9:35684475..35684520,+#_7c5aa72c10927979627e8c3e0e564f66p@chr9:35684475..35684520, +
7.09e-34FFCP PHASE1:Hg19::chr19:50031567..50031632,+#_935c9a99c054f6500dc9111a8df0bc0ep2@RCN3
7.09e-34FFCP PHASE2:Hg19::chr19:50031567..50031632,+#_935c9a99c054f6500dc9111a8df0bc0ep2@RCN3
9.25e-34FFCP PHASE2:Hg19::chr7:102553470..102553487,+#_066496df34db4f6a5e51b0d67e2d747ep2@LRRC17
9.25e-34FFCP PHASE1:Hg19::chr7:102553470..102553487,+#_066496df34db4f6a5e51b0d67e2d747ep2@LRRC17
1.81e-33FFCP PHASE2:Hg19::chr9:35689148..35689192,+#_c83f1919ca895fb6a5841303ba0d0b71p@chr9:35689148..35689192, +
1.81e-33FFCP PHASE2:Mm9::chr13:119579287..119579292,+#_2697a2ff4c2a0829595d2af029f9b01cp@chr13:119579287..119579292, +
1.81e-33FFCP PHASE1:Mm9::chr13:119579287..119579292,+#_2697a2ff4c2a0829595d2af029f9b01cp@chr13:119579287..119579292, +
1.81e-33FFCP PHASE1:Hg19::chr9:35689148..35689192,+#_c83f1919ca895fb6a5841303ba0d0b71p@chr9:35689148..35689192, +
2.11e-33FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_9e568b92eb6b5fd19c7f8cbb420e7f6ep@chr17:14813242..14813246, -
2.11e-33FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_9e568b92eb6b5fd19c7f8cbb420e7f6ep@chr17:14813242..14813246, -
3.09e-33FFCP PHASE2:Hg19::chr7:102553430..102553456,+#_6db1e29340ee99d1583604a43db8b1afp1@LRRC17
3.09e-33FFCP PHASE1:Hg19::chr7:102553430..102553456,+#_6db1e29340ee99d1583604a43db8b1afp1@LRRC17
1.1e-32FFCP PHASE2:Hg19::chr21:47518695..47518709,+#_f15c74e17c5db77e431b75219ef4464ep6@COL6A2
1.1e-32FFCP PHASE1:Hg19::chr21:47518695..47518709,+#_f15c74e17c5db77e431b75219ef4464ep6@COL6A2
1.19e-32FFCP PHASE2:Hg19::chr14:94595800..94595811,-#_2de8f847defab5700152a0beaa36496bp3@IFI27L2
1.19e-32FFCP PHASE1:Hg19::chr14:94595800..94595811,-#_2de8f847defab5700152a0beaa36496bp3@IFI27L2
3.07e-32FFCP PHASE1:Mm9::chrX:160823859..160823870,+#_0faad05eae83c8497f21ad02acbf65b4p@chrX:160823859..160823870, +
3.07e-32FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_0faad05eae83c8497f21ad02acbf65b4p@chrX:160840025..160840037, +
3.07e-32FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_0faad05eae83c8497f21ad02acbf65b4p@chrX:160840048..160840057, +
3.07e-32FFCP PHASE2:Mm9::chrX:160823859..160823870,+#_0faad05eae83c8497f21ad02acbf65b4p@chrX:160823859..160823870, +
3.07e-32FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_0faad05eae83c8497f21ad02acbf65b4p@chrX:160840025..160840037, +
3.07e-32FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_0faad05eae83c8497f21ad02acbf65b4p@chrX:160840048..160840057, +
4.43e-32FFCP PHASE2:Mm9::chr1:127573795..127573810,+#_f85c87ce78a61b4fc7dd96a7dd9f69a8p4@Gpr39
4.43e-32FFCP PHASE1:Mm9::chr1:127573795..127573810,+#_f85c87ce78a61b4fc7dd96a7dd9f69a8p4@Gpr39
5.28e-32FFCP PHASE2:Hg19::chr21:47518637..47518688,+#_b3a46bbda8b3c9e31ee2fea9ebbbf6f2p2@COL6A2
5.28e-32FFCP PHASE1:Hg19::chr21:47518637..47518688,+#_b3a46bbda8b3c9e31ee2fea9ebbbf6f2p2@COL6A2
1.15e-31FFCP PHASE2:Hg19::chr9:35685273..35685313,+#_c79b976edd1dc837919bf78da88ce373p@chr9:35685273..35685313, +
1.15e-31FFCP PHASE1:Hg19::chr9:35685273..35685313,+#_c79b976edd1dc837919bf78da88ce373p@chr9:35685273..35685313, +
4.03e-31FFCP PHASE1:Hg19::chr2:33359687..33359717,+#_8096342cf3d4a20dc43be1c47de1bf45p2@LTBP1
4.03e-31FFCP PHASE2:Hg19::chr2:33359687..33359717,+#_8096342cf3d4a20dc43be1c47de1bf45p2@LTBP1
5.23e-31FFCP PHASE1:Hg19::chr12:53491743..53491754,+#_5d447f37402ebc38382c02fa6414a242p1@AK074416
5.23e-31FFCP PHASE2:Hg19::chr12:53491743..53491754,+#_5d447f37402ebc38382c02fa6414a242p1@AK074416
6.45e-31FFCP PHASE1:Hg19::chr4:74703497..74703511,+#_a2ee0e47c08da261959cd13ddaf29593p@chr4:74703497..74703511, +
6.45e-31FFCP PHASE2:Hg19::chr4:74703497..74703511,+#_a2ee0e47c08da261959cd13ddaf29593p@chr4:74703497..74703511, +
7.77e-31FFCP PHASE1:Hg19::chr2:134548872..134548879,-#_9d7d958b3c6e92828e15bd0534d87fa0p@chr2:134548872..134548879, -
7.77e-31FFCP PHASE2:Hg19::chr2:134548872..134548879,-#_9d7d958b3c6e92828e15bd0534d87fa0p@chr2:134548872..134548879, -
1.41e-30FFCP PHASE2:Hg19::chr21:47532318..47532355,+#_b5a1231cba3db8d581281e3fceb5befbp8@COL6A2
1.41e-30FFCP PHASE1:Hg19::chr21:47532318..47532355,+#_b5a1231cba3db8d581281e3fceb5befbp8@COL6A2
1.54e-30FFCP PHASE1:Hg19::chr7:100773764..100773799,-#_8ea3781d372f9384750ee3fb4211d1bfp@chr7:100773764..100773799, -
1.54e-30FFCP PHASE2:Hg19::chr7:100773764..100773799,-#_8ea3781d372f9384750ee3fb4211d1bfp@chr7:100773764..100773799, -
2.31e-30FFCP PHASE1:Hg19::chr21:47542827..47542859,-#_cc1a6479d1238b57dbc19b38d53aafc3p@chr21:47542827..47542859, -
2.31e-30FFCP PHASE2:Hg19::chr21:47542827..47542859,-#_cc1a6479d1238b57dbc19b38d53aafc3-, p@chr21:47542827..47542859
8.44e-30FFCP PHASE2:Hg19::chr21:47532107..47532192,+#_ee04c92a004f42f8692a8747708956f3p5@COL6A2
8.44e-30FFCP PHASE1:Hg19::chr21:47532107..47532192,+#_ee04c92a004f42f8692a8747708956f3p5@COL6A2
1.78e-29FFCP PHASE2:Hg19::chr7:93516035..93516056,+#_0726b8c78d1c52d0728febd6702de5bcp1@CU675118
1.78e-29FFCP PHASE1:Hg19::chr7:93516035..93516056,+#_0726b8c78d1c52d0728febd6702de5bcp1@CU675118
1.8e-29FFCP PHASE2:Hg19::chr9:35685692..35685745,-#_18704fd2d4ebec3721977951b5334ff2p2@TPM2
1.8e-29FFCP PHASE1:Hg19::chr9:35685692..35685745,-#_18704fd2d4ebec3721977951b5334ff2p2@TPM2
2.49e-29FFCP PHASE1:Hg19::chr1:79472477..79472510,-#_e531e4bb2394ade96847117e059a64e1p2@ELTD1
2.49e-29FFCP PHASE2:Hg19::chr1:79472477..79472510,-#_e531e4bb2394ade96847117e059a64e1p2@ELTD1
2.65e-29FFCP PHASE2:Hg19::chr4:86699834..86699889,+#_7fbc1ca77c7513d9652d4de8911cb00bp5@ARHGAP24
2.65e-29FFCP PHASE1:Hg19::chr4:86699834..86699889,+#_7fbc1ca77c7513d9652d4de8911cb00bp5@ARHGAP24
2.9e-29FFCP PHASE2:Hg19::chr21:47404327..47404375,-#_c4b171f35c3900f55849a46057346847p@chr21:47404327..47404375, -
2.9e-29FFCP PHASE1:Hg19::chr21:47404327..47404375,-#_c4b171f35c3900f55849a46057346847p@chr21:47404327..47404375, -
4.51e-29FFCP PHASE2:Hg19::chrX:38033461..38033496,-#_d48b9999190ff817211db4beab71ba94p@chrX:38033461..38033496, -
4.51e-29FFCP PHASE1:Hg19::chrX:38033461..38033496,-#_d48b9999190ff817211db4beab71ba94p@chrX:38033461..38033496, -
5.36e-29FFCP PHASE2:Hg19::chr21:47532365..47532492,-#_9871b7717721812018d88d7bc7f9af2fp@chr21:47532365..47532492, -
5.36e-29FFCP PHASE1:Hg19::chr21:47532365..47532492,-#_9871b7717721812018d88d7bc7f9af2fp@chr21:47532365..47532492, -
6.49e-29FFCP PHASE1:Hg19::chr2:33359579..33359590,+#_8afc2068e28449b22c7f8b12e10f5055p4@LTBP1
6.49e-29FFCP PHASE2:Hg19::chr2:33359579..33359590,+#_8afc2068e28449b22c7f8b12e10f5055p4@LTBP1
6.94e-29FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_4d6ac45ea7e1211abc22ba792c53ae79p@chr11:102661517..102661541, -
6.94e-29FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_4d6ac45ea7e1211abc22ba792c53ae79p@chr11:102661517..102661541, -
7.21e-29FFCP PHASE1:Mm9::chr1:127574253..127574264,+#_5ee8d1a8ec61505383c9fa8e14bf5a6ap@chr1:127574253..127574264, +
7.21e-29FFCP PHASE2:Mm9::chr1:127574253..127574264,+#_5ee8d1a8ec61505383c9fa8e14bf5a6ap@chr1:127574253..127574264, +
7.95e-29FFCP PHASE1:Mm9::chr3:79689074..79689090,+#_3ceadef33d54626d144f981e40a58c03p11@Fam198b
7.95e-29FFCP PHASE2:Mm9::chr3:79689074..79689090,+#_3ceadef33d54626d144f981e40a58c03p11@Fam198b
8.06e-29FFCP PHASE1:Hg19::chr7:100773872..100773904,-#_6d4ad10b60b753602b1000f79a269424-, p@chr7:100773872..100773904
8.06e-29FFCP PHASE2:Hg19::chr7:100773872..100773904,-#_6d4ad10b60b753602b1000f79a269424p@chr7:100773872..100773904, -
8.95e-29FFCP PHASE2:Hg19::chr12:53492630..53492661,+#_42e3d5899db5d90543e10abbe6aa2f6ep4@IGFBP6
8.95e-29FFCP PHASE1:Hg19::chr12:53492630..53492661,+#_42e3d5899db5d90543e10abbe6aa2f6ep4@IGFBP6
9.05e-29FFCP PHASE1:Hg19::chr7:99686632..99686645,+#_41702c905abe8c173e8d8123b14e6915p2@COPS6
9.05e-29FFCP PHASE2:Hg19::chr7:99686632..99686645,+#_41702c905abe8c173e8d8123b14e6915p2@COPS6
9.39e-29FFCP PHASE1:Mm9::chr1:127573733..127573745,+#_bcb3504b8cbd924347e50259ffdbfaefp7@Gpr39
9.39e-29FFCP PHASE2:Mm9::chr1:127573733..127573745,+#_bcb3504b8cbd924347e50259ffdbfaefp7@Gpr39