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UBERON:0007811

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Name:craniocervical region
Namespace:FANTOM
Definition:"The anteriormost subdivision of the body that includes the head and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae." [UBERON:cjm]
Xrefs:
links:

EV:0100009
FMA:280881
galen:HeadAndNeck
MA:0000006
ncithesaurus:Head_and_Neck

SCTID:361355005
Synonyms: "head and neck" EXACT [FMA:280881]
"head or neck" RELATED []

Ontology association

Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.



link to ontology dataset


data

Parents

is_a:UBERON:0000475(organism subdivision)
part_of:UBERON:0000153(anterior region of body),UBERON:0013702(body proper)



Children

derives from:FF:0102709 (head and neck squamous cell carcinoma cell line sample)
part of:UBERON:0000033 (head),UBERON:0000974 (neck),UBERON:0007914 (head or neck bone),UBERON:0008229 (craniocervical region musculature),UBERON:0010959 (craniocervical muscle)

Ontology Tree: Loaded from BioPortal


FF samples

It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens) Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term
TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007811 (craniocervical region), sorted by p-values
Analyst: Hideya Kawaji



link to source dataset
human : data

mouse : data

P-valueFFCPShort description
1.07e-42FFCP PHASE1:Mm9::chr6:41483113..41483131,+#_7cf1992a8c5e5382e9378911cd28e762p4@uc009bpa.1
1.07e-42FFCP PHASE2:Mm9::chr6:41483113..41483131,+#_7cf1992a8c5e5382e9378911cd28e762p4@uc009bpa.1
2.66e-42FFCP PHASE1:Mm9::chr6:41483037..41483046,+#_f5590c80be7258bffbcdbe8c6ceb7386p8@uc009bpa.1
2.66e-42FFCP PHASE2:Mm9::chr6:41483037..41483046,+#_f5590c80be7258bffbcdbe8c6ceb7386p8@uc009bpa.1
7.88e-41FFCP PHASE1:Mm9::chr6:41485075..41485096,+#_0df6bba63a0ecf2739302eaea7b7ccd1p1@ENSMUST00000103288, p1@uc009bpl.1
7.88e-41FFCP PHASE2:Mm9::chr6:41485075..41485096,+#_0df6bba63a0ecf2739302eaea7b7ccd1p1@ENSMUST00000103288, p1@uc009bpl.1
3.59e-40FFCP PHASE2:Mm9::chr12:108361918..108361930,-#_91d9de81a68e5264cd095e04b6e4a2bdp@chr12:108361918..108361930, -
3.59e-40FFCP PHASE2:Mm9::chr6:41491752..41491776,-#_91d9de81a68e5264cd095e04b6e4a2bdp@chr6:41491752..41491776, -
3.59e-40FFCP PHASE1:Mm9::chr6:41491752..41491776,-#_91d9de81a68e5264cd095e04b6e4a2bdp@chr6:41491752..41491776, -
3.59e-40FFCP PHASE1:Mm9::chr12:108361918..108361930,-#_91d9de81a68e5264cd095e04b6e4a2bdp@chr12:108361918..108361930, -
9.63e-40FFCP PHASE2:Mm9::chr10:20880874..20880893,+#_4788d5b8702745d66efb4a9fb69269bfp@chr10:20880874..20880893, +
9.63e-40FFCP PHASE1:Mm9::chr10:20880874..20880893,+#_4788d5b8702745d66efb4a9fb69269bfp@chr10:20880874..20880893, +
3.85e-39FFCP PHASE1:Mm9::chr6:41483173..41483188,+#_e75d0e8120999b57691467e0818aeb12p2@ENSMUST00000103283
3.85e-39FFCP PHASE2:Mm9::chr6:41483173..41483188,+#_e75d0e8120999b57691467e0818aeb12p2@ENSMUST00000103283
4.46e-39FFCP PHASE2:Mm9::chr6:41484803..41484826,+#_929b27eae5ed6762c18c3feaedf47da5p1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1
4.46e-39FFCP PHASE1:Mm9::chr6:41484803..41484826,+#_929b27eae5ed6762c18c3feaedf47da5p1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1
2.16e-38FFCP PHASE2:Mm9::chr6:41494001..41494028,+#_29affb60429d0d35b5bc8bcd214d2d76p@chr6:41494001..41494028, +
2.16e-38FFCP PHASE1:Mm9::chr6:41494001..41494028,+#_29affb60429d0d35b5bc8bcd214d2d76p@chr6:41494001..41494028, +
2.57e-38FFCP PHASE1:Mm9::chr9:44807434..44807445,-#_50ce3e6e55881c8a40d0bb4cc3b04372p@chr9:44807434..44807445, -
2.57e-38FFCP PHASE2:Mm9::chr9:44807434..44807445,-#_50ce3e6e55881c8a40d0bb4cc3b04372p@chr9:44807434..44807445, -
3.48e-38FFCP PHASE2:Mm9::chr6:41492605..41492621,+#_313f07b4a6576786353f392a3ffe59bep@chr6:41492605..41492621, +
3.48e-38FFCP PHASE1:Mm9::chr6:41492605..41492621,+#_313f07b4a6576786353f392a3ffe59bep@chr6:41492605..41492621, +
3.96e-38FFCP PHASE1:Mm9::chr2:11093788..11093799,+#_74c5dac6d764df26b7dc4dff6941cfb4p11@Prkcq
3.96e-38FFCP PHASE2:Mm9::chr2:11093788..11093799,+#_74c5dac6d764df26b7dc4dff6941cfb4p11@Prkcq
5.3e-38FFCP PHASE2:Mm9::chr9:44809185..44809215,-#_eb33e5b53f53850850d5263eec12d41dp@chr9:44809185..44809215, -
5.3e-38FFCP PHASE1:Mm9::chr9:44809185..44809215,-#_eb33e5b53f53850850d5263eec12d41dp@chr9:44809185..44809215, -
5.82e-38FFCP PHASE1:Mm9::chr14:54791784..54791787,+#_ecd46219db2d8cefd88fed25d5166f7cp@chr14:54791784..54791787, +
5.82e-38FFCP PHASE2:Mm9::chr14:54791784..54791787,+#_ecd46219db2d8cefd88fed25d5166f7cp@chr14:54791784..54791787, +
8.41e-38FFCP PHASE1:Mm9::chr6:40997465..40997489,+#_9f800ff8d2180d6511964bc3f6834330p1@ENSMUST00000103263
8.41e-38FFCP PHASE2:Mm9::chr6:40997465..40997489,+#_9f800ff8d2180d6511964bc3f6834330p1@ENSMUST00000103263
1.06e-37FFCP PHASE1:Mm9::chr9:44793518..44793537,+#_665e141be5bbc13c792f50d88bae3abbp@chr9:44793518..44793537, +
1.06e-37FFCP PHASE2:Mm9::chr9:44793518..44793537,+#_665e141be5bbc13c792f50d88bae3abbp@chr9:44793518..44793537, +
1.22e-37FFCP PHASE1:Mm9::chr2:156796238..156796256,-#_965015a2018ce4f26eb7f2a35135bc97p@chr2:156796238..156796256, -
1.22e-37FFCP PHASE2:Mm9::chr2:156796238..156796256,-#_965015a2018ce4f26eb7f2a35135bc97p@chr2:156796238..156796256, -
1.26e-37FFCP PHASE1:Mm9::chr6:41071548..41071565,+#_534b570d9063714ef2f66c54832fd7e8+, p@chr6:41071548..41071565
1.26e-37FFCP PHASE2:Mm9::chr6:41071548..41071565,+#_534b570d9063714ef2f66c54832fd7e8p@chr6:41071548..41071565, +
1.78e-37FFCP PHASE1:Mm9::chr10:28388454..28388458,+#_7111b6426ed772873b43a83e5714e83ep5@Themis
1.78e-37FFCP PHASE2:Mm9::chr10:28388454..28388458,+#_7111b6426ed772873b43a83e5714e83ep5@Themis
1.96e-37FFCP PHASE2:Mm9::chr6:41482920..41482933,+#_7ee97ab1866b799a206f2a3d6562fac3p5@uc009bpa.1
1.96e-37FFCP PHASE1:Mm9::chr6:41482920..41482933,+#_7ee97ab1866b799a206f2a3d6562fac3p5@uc009bpa.1
2.79e-37FFCP PHASE1:Mm9::chr6:40997323..40997349,+#_a64e8258194718ef2321cef2f84fd58cp2@uc009bnp.1, p2@uc012eki.1
2.79e-37FFCP PHASE2:Mm9::chr6:40997323..40997349,+#_a64e8258194718ef2321cef2f84fd58cp2@uc009bnp.1, p2@uc012eki.1
1.41e-36FFCP PHASE1:Mm9::chr11:52095797..52095809,-#_3d0ef7d06c9e517d121520330a2cecafp5@Tcf7
1.41e-36FFCP PHASE2:Mm9::chr11:52095797..52095809,-#_3d0ef7d06c9e517d121520330a2cecafp5@Tcf7
1.71e-36FFCP PHASE2:Mm9::chr6:124838183..124838199,-#_988d951d388a3f80ea3d83da058ff52dp2@Cd4
1.71e-36FFCP PHASE1:Mm9::chr6:124838183..124838199,-#_988d951d388a3f80ea3d83da058ff52dp2@Cd4
3.36e-36FFCP PHASE2:Mm9::chr14:61328148..61328173,+#_eefb7698cb0819ff71993f3887c67ec8p@chr14:61328148..61328173, +
3.36e-36FFCP PHASE1:Mm9::chr14:61328148..61328173,+#_eefb7698cb0819ff71993f3887c67ec8p@chr14:61328148..61328173, +
5.16e-36FFCP PHASE1:Mm9::chr6:41128981..41128995,+#_17bcced7dbd4007d0e774b40461f9f1bp1@uc012ekr.1
5.16e-36FFCP PHASE2:Mm9::chr6:41128981..41128995,+#_17bcced7dbd4007d0e774b40461f9f1bp1@uc012ekr.1
6.0e-36FFCP PHASE2:Mm9::chr6:40841675..40841691,+#_a29b55ac17a87fc95f8fc5f1937a264dp2@1810009J06Rik
6.0e-36FFCP PHASE1:Mm9::chr6:40841675..40841691,+#_a29b55ac17a87fc95f8fc5f1937a264dp2@1810009J06Rik
7.07e-36FFCP PHASE1:Mm9::chr6:41483016..41483036,+#_d22dc9da2af1408c95be4420957abcf8p2@uc009bpa.1
7.07e-36FFCP PHASE2:Mm9::chr6:41483016..41483036,+#_d22dc9da2af1408c95be4420957abcf8p2@uc009bpa.1
7.69e-36FFCP PHASE2:Mm9::chr6:41066036..41066054,+#_fa5cc58a07375da4cb011201f2b2e752p1@uc012ekk.1
7.69e-36FFCP PHASE1:Mm9::chr6:41066036..41066054,+#_fa5cc58a07375da4cb011201f2b2e752p1@uc012ekk.1
7.74e-36FFCP PHASE1:Mm9::chrX:39855684..39855699,+#_376ee4c715fb6ef0f9d560fc546f211bp2@Sh2d1a
7.74e-36FFCP PHASE2:Mm9::chrX:39855684..39855699,+#_376ee4c715fb6ef0f9d560fc546f211bp2@Sh2d1a
8.5e-36FFCP PHASE2:Mm9::chr6:41491943..41491953,+#_f5f553b7c2508a3992a74a222e9e7b83p3@uc009bpo.1, p3@uc009bpp.1
8.5e-36FFCP PHASE2:Mm9::chr6:41009432..41009454,+#_f5f553b7c2508a3992a74a222e9e7b83p1@ENSMUST00000103265
8.5e-36FFCP PHASE1:Mm9::chr6:41491943..41491953,+#_f5f553b7c2508a3992a74a222e9e7b83p3@uc009bpo.1, p3@uc009bpp.1
8.5e-36FFCP PHASE1:Mm9::chr6:41009432..41009454,+#_f5f553b7c2508a3992a74a222e9e7b83p1@ENSMUST00000103265
9.52e-36FFCP PHASE2:Hg19::chr14:37126765..37126799,+#_c4cc76559f47ea513d1f07efc89f0b71p2@PAX9
9.52e-36FFCP PHASE1:Hg19::chr14:37126765..37126799,+#_c4cc76559f47ea513d1f07efc89f0b71p2@PAX9
1.02e-35FFCP PHASE2:Mm9::chr7:133512043..133512060,-#_a83a89952491ed465579c1b8b5fd126fp@chr7:133512043..133512060, -
1.02e-35FFCP PHASE1:Mm9::chr7:133512043..133512060,-#_a83a89952491ed465579c1b8b5fd126fp@chr7:133512043..133512060, -
1.55e-35FFCP PHASE2:Mm9::chr16:48772258..48772270,-#_428436ea08a1424ad3181a2e5f7f1cfbp5@Trat1
1.55e-35FFCP PHASE1:Mm9::chr16:48772258..48772270,-#_428436ea08a1424ad3181a2e5f7f1cfbp5@Trat1
1.62e-35FFCP PHASE1:Mm9::chr6:41128837..41128859,+#_7d9d02590c15b067d6da235fec4084d4p2@Gm5409
1.62e-35FFCP PHASE2:Mm9::chr6:41128837..41128859,+#_7d9d02590c15b067d6da235fec4084d4p2@Gm5409
2.15e-35FFCP PHASE2:Mm9::chr14:54794540..54794554,+#_2fab97ec9cb4a3a3633dcab718081b9dp@chr14:54794540..54794554, +
2.15e-35FFCP PHASE1:Mm9::chr14:54794540..54794554,+#_2fab97ec9cb4a3a3633dcab718081b9dp@chr14:54794540..54794554, +
2.27e-35FFCP PHASE2:Mm9::chr6:41491801..41491815,-#_615854df2966c9d9edc62dac547816e6p@chr6:41491801..41491815, -
2.27e-35FFCP PHASE2:Mm9::chr14:54496363..54496388,+#_615854df2966c9d9edc62dac547816e6p@chr14:54496363..54496388, +
2.27e-35FFCP PHASE1:Mm9::chr14:54496363..54496388,+#_615854df2966c9d9edc62dac547816e6p@chr14:54496363..54496388, +
2.27e-35FFCP PHASE1:Mm9::chr6:41491801..41491815,-#_615854df2966c9d9edc62dac547816e6p@chr6:41491801..41491815, -
2.29e-35FFCP PHASE1:Mm9::chr6:41489240..41489252,+#_c3a63a2cd0afd842b2d848f3e59b16b4p@chr6:41489240..41489252, +
2.29e-35FFCP PHASE2:Mm9::chr6:41489240..41489252,+#_c3a63a2cd0afd842b2d848f3e59b16b4p@chr6:41489240..41489252, +
2.52e-35FFCP PHASE1:Mm9::chr7:133512935..133512936,-#_22371bce152d78ca1488e28fd0c59462p8@Lat
2.52e-35FFCP PHASE2:Mm9::chr4:125978325..125978339,-#_22371bce152d78ca1488e28fd0c59462p@chr4:125978325..125978339, -
2.52e-35FFCP PHASE1:Mm9::chr11:87627824..87627837,-#_22371bce152d78ca1488e28fd0c59462p@chr11:87627824..87627837, -
2.52e-35FFCP PHASE2:Mm9::chr11:87627824..87627837,-#_22371bce152d78ca1488e28fd0c59462p@chr11:87627824..87627837, -
2.52e-35FFCP PHASE1:Mm9::chr6:41483146..41483158,+#_22371bce152d78ca1488e28fd0c59462p6@uc009bpa.1
2.52e-35FFCP PHASE2:Mm9::chr7:133512935..133512936,-#_22371bce152d78ca1488e28fd0c59462p8@Lat
2.52e-35FFCP PHASE1:Mm9::chr4:125978325..125978339,-#_22371bce152d78ca1488e28fd0c59462p@chr4:125978325..125978339, -
2.52e-35FFCP PHASE2:Mm9::chr6:41483146..41483158,+#_22371bce152d78ca1488e28fd0c59462p6@uc009bpa.1
2.6e-35FFCP PHASE2:Mm9::chr6:41494376..41494389,-#_07234f6c75f27409e5d6da29113e4739p@chr6:41494376..41494389, -
2.6e-35FFCP PHASE1:Mm9::chr6:41231266..41231303,+#_07234f6c75f27409e5d6da29113e4739p1@ENSMUST00000103282
2.6e-35FFCP PHASE1:Mm9::chr6:41494376..41494389,-#_07234f6c75f27409e5d6da29113e4739p@chr6:41494376..41494389, -
2.6e-35FFCP PHASE2:Mm9::chr6:41231266..41231303,+#_07234f6c75f27409e5d6da29113e4739p1@ENSMUST00000103282
2.68e-35FFCP PHASE2:Mm9::chr7:133512914..133512925,-#_8d476722e7dba928fd8f480a5566d456p7@Lat
2.68e-35FFCP PHASE1:Mm9::chr12:114663631..114663645,-#_8d476722e7dba928fd8f480a5566d456p@chr12:114663631..114663645, -
2.68e-35FFCP PHASE2:Mm9::chr12:114663631..114663645,-#_8d476722e7dba928fd8f480a5566d456p@chr12:114663631..114663645, -
2.68e-35FFCP PHASE1:Mm9::chr7:133512914..133512925,-#_8d476722e7dba928fd8f480a5566d456p7@Lat
2.83e-35FFCP PHASE2:Mm9::chr6:41138311..41138333,+#_f1b0466f621de234629a02f6d59b46ecp@chr6:41138311..41138333, +
2.83e-35FFCP PHASE1:Mm9::chr6:41138311..41138333,+#_f1b0466f621de234629a02f6d59b46ecp@chr6:41138311..41138333, +
3.33e-35FFCP PHASE2:Mm9::chr6:40996879..40996890,+#_bd687d4aecc56ccee0d39760c692b88ap5@uc009bnp.1, p5@uc012eki.1
3.33e-35FFCP PHASE1:Mm9::chr6:40996879..40996890,+#_bd687d4aecc56ccee0d39760c692b88ap5@uc009bnp.1, p5@uc012eki.1
3.55e-35FFCP PHASE2:Mm9::chr11:53448200..53448205,-#_5c2c14f4c0e4ac704688e6c75a2ba699p1@Il13
3.55e-35FFCP PHASE1:Mm9::chr11:53448200..53448205,-#_5c2c14f4c0e4ac704688e6c75a2ba699p1@Il13