Personal tools

UBERON:0008947

From FANTOM5_SSTAR

Jump to: navigation, search

Name:respiratory primordium
Namespace:FANTOM
Xrefs:
links:

EHDAA2:0004069

ncithesaurus:Respiratory_Primordium

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0001048(primordium)
part_of:UBERON:0003258(endoderm of foregut)



Children

develops from:UBERON:0000065 (respiratory tract),UBERON:0000118 (lung bud),UBERON:0001737 (larynx),UBERON:0003126 (trachea)
part of:UBERON:0005597 (lung primordium)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0008947 (respiratory primordium), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.21e-66FFCP PHASE2:Mm9::chr11:85703335..85703350,+#_456fc65cd417a979100fc3b737104462p4@Tbx4
1.21e-66FFCP PHASE1:Mm9::chr11:85703335..85703350,+#_456fc65cd417a979100fc3b737104462p4@Tbx4
4.71e-66FFCP PHASE2:Mm9::chr9:20829911..20829920,+#_7184300ff6a39a760c5db6ce5544c384p@chr9:20829911..20829920, +
4.71e-66FFCP PHASE1:Mm9::chr9:20829911..20829920,+#_7184300ff6a39a760c5db6ce5544c384p@chr9:20829911..20829920, +
1.06e-62FFCP PHASE1:Mm9::chr11:85589157..85589190,-#_e8a53c2e7d477f0007ae5607952a3ac1p1@ENSMUST00000134305
1.06e-62FFCP PHASE2:Mm9::chr11:85589157..85589190,-#_e8a53c2e7d477f0007ae5607952a3ac1p1@ENSMUST00000134305
1.52e-61FFCP PHASE1:Mm9::chr11:85533239..85533252,-#_de06c2d607f00d8e0532769b20915ef6p1@ENSMUST00000146806, p1@ENSMUST00000151652, p1@uc007krv.1, p1@uc007krw.1
1.52e-61FFCP PHASE2:Mm9::chr11:85533239..85533252,-#_de06c2d607f00d8e0532769b20915ef6p1@ENSMUST00000146806, p1@ENSMUST00000151652, p1@uc007krv.1, p1@uc007krw.1
1.91e-61FFCP PHASE1:Mm9::chr11:85699562..85699575,+#_4eed34035cd52f594ec809d5df657037p6@Tbx4
1.91e-61FFCP PHASE2:Mm9::chr11:85699562..85699575,+#_4eed34035cd52f594ec809d5df657037p6@Tbx4
5.56e-61FFCP PHASE2:Mm9::chr12:57636003..57636017,-#_88b85e8df6f9abdac1ae77d99f9cb12ep@chr12:57636003..57636017, -
5.56e-61FFCP PHASE2:Mm9::chr11:59457994..59457997,-#_88b85e8df6f9abdac1ae77d99f9cb12ep@chr11:59457994..59457997, -
5.56e-61FFCP PHASE1:Mm9::chr11:59457994..59457997,-#_88b85e8df6f9abdac1ae77d99f9cb12ep@chr11:59457994..59457997, -
5.56e-61FFCP PHASE2:Mm9::chr8:94878479..94878503,-#_88b85e8df6f9abdac1ae77d99f9cb12ep@chr8:94878479..94878503, -
5.56e-61FFCP PHASE1:Mm9::chr12:57636003..57636017,-#_88b85e8df6f9abdac1ae77d99f9cb12ep@chr12:57636003..57636017, -
5.56e-61FFCP PHASE1:Mm9::chr8:94878479..94878503,-#_88b85e8df6f9abdac1ae77d99f9cb12ep@chr8:94878479..94878503, -
5.56e-61FFCP PHASE1:Mm9::chr4:138812977..138812992,+#_88b85e8df6f9abdac1ae77d99f9cb12ep@chr4:138812977..138812992, +
5.56e-61FFCP PHASE2:Mm9::chr12:57598716..57598720,-#_88b85e8df6f9abdac1ae77d99f9cb12ep@chr12:57598716..57598720, -
5.56e-61FFCP PHASE2:Mm9::chr4:138812977..138812992,+#_88b85e8df6f9abdac1ae77d99f9cb12ep@chr4:138812977..138812992, +
5.56e-61FFCP PHASE1:Mm9::chr12:57598716..57598720,-#_88b85e8df6f9abdac1ae77d99f9cb12ep@chr12:57598716..57598720, -
1.35e-60FFCP PHASE1:Mm9::chr7:56809246..56809272,+#_763f384134d892a858414f5c7f2b87cbp9@Nav2
1.35e-60FFCP PHASE2:Mm9::chr7:56809246..56809272,+#_763f384134d892a858414f5c7f2b87cbp9@Nav2
2.87e-58FFCP PHASE1:Mm9::chr12:57633887..57633899,-#_e0b00b25d0af6ed6e5a94399f47a7ec2p@chr12:57633887..57633899, -
2.87e-58FFCP PHASE2:Mm9::chr12:57633887..57633899,-#_e0b00b25d0af6ed6e5a94399f47a7ec2p@chr12:57633887..57633899, -
1.23e-57FFCP PHASE1:Mm9::chr12:57637649..57637665,-#_89ba902691cfb243e29f39368d0b8ccfp8@Nkx2-1
1.23e-57FFCP PHASE2:Mm9::chr12:57637649..57637665,-#_89ba902691cfb243e29f39368d0b8ccfp8@Nkx2-1
1.37e-57FFCP PHASE1:Mm9::chr12:57630487..57630498,-#_f5d97e7d33563d1863be7144ee4229d9p2@E030019B13Rik
1.37e-57FFCP PHASE2:Mm9::chr12:57630487..57630498,-#_f5d97e7d33563d1863be7144ee4229d9p2@E030019B13Rik
1.53e-57FFCP PHASE2:Mm9::chr2:17653019..17653038,-#_e9ee51dc74b0f7ccfe51f6f367d94f00p10@Nebl
1.53e-57FFCP PHASE1:Mm9::chr2:17653019..17653038,-#_e9ee51dc74b0f7ccfe51f6f367d94f00p10@Nebl
1.7e-57FFCP PHASE2:Mm9::chr12:57637700..57637717,-#_6de78c72efe0c9ca5e6fd4d394e90928p9@Nkx2-1
1.7e-57FFCP PHASE1:Mm9::chr12:57637700..57637717,-#_6de78c72efe0c9ca5e6fd4d394e90928p9@Nkx2-1
1.79e-56FFCP PHASE1:Mm9::chr19:18833097..18833135,+#_6af4ae109d4e279971a33e7ea26991d3p3@Trpm6
1.79e-56FFCP PHASE2:Mm9::chr12:57598537..57598547,-#_6af4ae109d4e279971a33e7ea26991d3p@chr12:57598537..57598547, -
1.79e-56FFCP PHASE1:Mm9::chr12:57598537..57598547,-#_6af4ae109d4e279971a33e7ea26991d3p@chr12:57598537..57598547, -
1.79e-56FFCP PHASE1:Mm9::chr12:57630364..57630373,-#_6af4ae109d4e279971a33e7ea26991d3p3@E030019B13Rik
1.79e-56FFCP PHASE2:Mm9::chr12:57630364..57630373,-#_6af4ae109d4e279971a33e7ea26991d3p3@E030019B13Rik
1.79e-56FFCP PHASE2:Mm9::chr19:18833097..18833135,+#_6af4ae109d4e279971a33e7ea26991d3p3@Trpm6
2.01e-56FFCP PHASE2:Mm9::chr12:57636278..57636289,+#_ce3f00141ea126555dc4c510dafe8538p@chr12:57636278..57636289, +
2.01e-56FFCP PHASE1:Mm9::chr14:115241755..115241762,-#_ce3f00141ea126555dc4c510dafe8538p@chr14:115241755..115241762, -
2.01e-56FFCP PHASE2:Mm9::chr14:115241755..115241762,-#_ce3f00141ea126555dc4c510dafe8538p@chr14:115241755..115241762, -
2.01e-56FFCP PHASE1:Mm9::chr12:57636278..57636289,+#_ce3f00141ea126555dc4c510dafe8538p@chr12:57636278..57636289, +
2.24e-56FFCP PHASE1:Mm9::chr4:138812999..138813015,+#_225d224e71eef00a813ae67287b25a2ap@chr4:138812999..138813015, +
2.24e-56FFCP PHASE2:Mm9::chr4:138812999..138813015,+#_225d224e71eef00a813ae67287b25a2ap@chr4:138812999..138813015, +
3.93e-56FFCP PHASE2:Mm9::chr1:40522810..40522820,+#_4edb6abf351ee54bc7729b2e692e2b55p7@Il18r1
3.93e-56FFCP PHASE1:Mm9::chr1:40522810..40522820,+#_4edb6abf351ee54bc7729b2e692e2b55p7@Il18r1
6.2e-56FFCP PHASE2:Mm9::chr14:70922576..70922589,-#_46c8cdfa65ba661b6bafb762524ecbeap@chr14:70922576..70922589, -
6.2e-56FFCP PHASE1:Mm9::chr2:164374820..164374835,-#_46c8cdfa65ba661b6bafb762524ecbeap@chr2:164374820..164374835, -
6.2e-56FFCP PHASE2:Mm9::chr6:72256828..72256859,+#_46c8cdfa65ba661b6bafb762524ecbeap3@Sftpb
6.2e-56FFCP PHASE1:Mm9::chr2:66524237..66524246,-#_46c8cdfa65ba661b6bafb762524ecbeap@chr2:66524237..66524246, -
6.2e-56FFCP PHASE2:Mm9::chr1:184610062..184610074,+#_46c8cdfa65ba661b6bafb762524ecbeap@chr1:184610062..184610074, +
6.2e-56FFCP PHASE2:Mm9::chr14:70921265..70921285,-#_46c8cdfa65ba661b6bafb762524ecbeap@chr14:70921265..70921285, -
6.2e-56FFCP PHASE2:Mm9::chr2:164374820..164374835,-#_46c8cdfa65ba661b6bafb762524ecbeap@chr2:164374820..164374835, -
6.2e-56FFCP PHASE2:Mm9::chr2:66524237..66524246,-#_46c8cdfa65ba661b6bafb762524ecbeap@chr2:66524237..66524246, -
6.2e-56FFCP PHASE1:Mm9::chr6:72256828..72256859,+#_46c8cdfa65ba661b6bafb762524ecbeap3@Sftpb
6.2e-56FFCP PHASE1:Mm9::chr1:184610062..184610074,+#_46c8cdfa65ba661b6bafb762524ecbeap@chr1:184610062..184610074, +
6.2e-56FFCP PHASE1:Mm9::chr14:70922576..70922589,-#_46c8cdfa65ba661b6bafb762524ecbeap@chr14:70922576..70922589, -
6.2e-56FFCP PHASE1:Mm9::chr6:72255924..72255936,+#_46c8cdfa65ba661b6bafb762524ecbeap4@Sftpb
6.2e-56FFCP PHASE1:Mm9::chr14:70921265..70921285,-#_46c8cdfa65ba661b6bafb762524ecbeap@chr14:70921265..70921285, -
6.2e-56FFCP PHASE2:Mm9::chr6:72255924..72255936,+#_46c8cdfa65ba661b6bafb762524ecbeap4@Sftpb
9.42e-56FFCP PHASE2:Mm9::chr5:120282691..120282701,+#_4ce6f9458bc740eca8bd57c626ebe2bbp@chr5:120282691..120282701, +
9.42e-56FFCP PHASE1:Mm9::chr5:120282691..120282701,+#_4ce6f9458bc740eca8bd57c626ebe2bbp@chr5:120282691..120282701, +
1.34e-54FFCP PHASE1:Mm9::chr12:57636911..57636924,-#_23bd5df99a8aed1772e46bf19aaa8982p@chr12:57636911..57636924, -
1.34e-54FFCP PHASE2:Mm9::chr12:57636911..57636924,-#_23bd5df99a8aed1772e46bf19aaa8982p@chr12:57636911..57636924, -
3.97e-54FFCP PHASE2:Mm9::chr12:57630443..57630450,-#_99e05a892d127ddd77d19dfbdf1e8586p4@E030019B13Rik
3.97e-54FFCP PHASE1:Mm9::chr12:57630443..57630450,-#_99e05a892d127ddd77d19dfbdf1e8586p4@E030019B13Rik
1.46e-52FFCP PHASE1:Mm9::chr14:70922007..70922052,+#_40d0b7b3dca18a3fde25590314adc11fp@chr14:70922007..70922052, +
1.46e-52FFCP PHASE2:Mm9::chr14:70922007..70922052,+#_40d0b7b3dca18a3fde25590314adc11fp@chr14:70922007..70922052, +
1.46e-52FFCP PHASE1:Mm9::chr12:57623172..57623185,-#_40d0b7b3dca18a3fde25590314adc11fp@chr12:57623172..57623185, -
1.46e-52FFCP PHASE2:Mm9::chr12:57623172..57623185,-#_40d0b7b3dca18a3fde25590314adc11fp@chr12:57623172..57623185, -
1.62e-52FFCP PHASE1:Mm9::chr5:28785436..28785450,-#_8f9a62f520bc0c8c1f78c90fbc44dafcp@chr5:28785436..28785450, -
1.62e-52FFCP PHASE2:Mm9::chr5:28785436..28785450,-#_8f9a62f520bc0c8c1f78c90fbc44dafcp@chr5:28785436..28785450, -
1.8e-52FFCP PHASE2:Mm9::chr14:70922459..70922482,-#_1a13d54053d8281e38b194b1e135357cp@chr14:70922459..70922482, -
1.8e-52FFCP PHASE1:Mm9::chr14:70922459..70922482,-#_1a13d54053d8281e38b194b1e135357cp@chr14:70922459..70922482, -
5.65e-52FFCP PHASE2:Mm9::chr16:22439804..22439806,-#_97ead127c07e800286dffa2a369adc14p4@Etv5
5.65e-52FFCP PHASE1:Mm9::chr16:22439804..22439806,-#_97ead127c07e800286dffa2a369adc14p4@Etv5
1.97e-51FFCP PHASE1:Mm9::chr12:57376690..57376716,-#_556154d2a2b49a827e33f35b83aa1e49p@chr12:57376690..57376716, -
1.97e-51FFCP PHASE1:Mm9::chr14:70922486..70922510,-#_556154d2a2b49a827e33f35b83aa1e49p@chr14:70922486..70922510, -
1.97e-51FFCP PHASE2:Mm9::chr16:19706386..19706390,-#_556154d2a2b49a827e33f35b83aa1e49p4@Lamp3
1.97e-51FFCP PHASE1:Mm9::chr14:70923240..70923251,-#_556154d2a2b49a827e33f35b83aa1e49p@chr14:70923240..70923251, -
1.97e-51FFCP PHASE2:Mm9::chr6:72259797..72259814,+#_556154d2a2b49a827e33f35b83aa1e49p@chr6:72259797..72259814, +
1.97e-51FFCP PHASE1:Mm9::chr16:19706386..19706390,-#_556154d2a2b49a827e33f35b83aa1e49p4@Lamp3
1.97e-51FFCP PHASE2:Mm9::chr12:57376690..57376716,-#_556154d2a2b49a827e33f35b83aa1e49p@chr12:57376690..57376716, -
1.97e-51FFCP PHASE2:Mm9::chr14:70922486..70922510,-#_556154d2a2b49a827e33f35b83aa1e49p@chr14:70922486..70922510, -
1.97e-51FFCP PHASE2:Mm9::chr6:72263977..72263993,+#_556154d2a2b49a827e33f35b83aa1e49p@chr6:72263977..72263993, +
1.97e-51FFCP PHASE1:Mm9::chr6:72259797..72259814,+#_556154d2a2b49a827e33f35b83aa1e49p@chr6:72259797..72259814, +
1.97e-51FFCP PHASE2:Mm9::chr14:70923240..70923251,-#_556154d2a2b49a827e33f35b83aa1e49p@chr14:70923240..70923251, -
1.97e-51FFCP PHASE2:Mm9::chr6:72264418..72264441,+#_556154d2a2b49a827e33f35b83aa1e49p@chr6:72264418..72264441, +
1.97e-51FFCP PHASE1:Mm9::chr6:72263977..72263993,+#_556154d2a2b49a827e33f35b83aa1e49p@chr6:72263977..72263993, +
1.97e-51FFCP PHASE2:Mm9::chr6:72264890..72264911,+#_556154d2a2b49a827e33f35b83aa1e49p@chr6:72264890..72264911, +
1.97e-51FFCP PHASE1:Mm9::chr6:72264418..72264441,+#_556154d2a2b49a827e33f35b83aa1e49p@chr6:72264418..72264441, +
1.97e-51FFCP PHASE1:Mm9::chr6:72264890..72264911,+#_556154d2a2b49a827e33f35b83aa1e49p@chr6:72264890..72264911, +
2.21e-51FFCP PHASE1:Mm9::chr6:72264609..72264653,-#_09246a3f85b885ea72a50e5125ad4747p@chr6:72264609..72264653, -
2.21e-51FFCP PHASE2:Mm9::chr6:72264609..72264653,-#_09246a3f85b885ea72a50e5125ad4747p@chr6:72264609..72264653, -
2.47e-51FFCP PHASE1:Mm9::chr6:129378567..129378573,-#_679ba68eb6d87d304ea3e8b852b05f4dp@chr6:129378567..129378573, -
2.47e-51FFCP PHASE2:Mm9::chr6:129378567..129378573,-#_679ba68eb6d87d304ea3e8b852b05f4dp@chr6:129378567..129378573, -
3.74e-51FFCP PHASE1:Mm9::chr3:122432836..122432847,+#_2dae207f6ae6439cd6924ca7fb4dd507p16@Pde5a
3.74e-51FFCP PHASE2:Mm9::chr3:122432836..122432847,+#_2dae207f6ae6439cd6924ca7fb4dd507p16@Pde5a
5.44e-51FFCP PHASE1:Mm9::chr12:57637595..57637608,-#_fbdcdb337645032d6b1e679f335cd8cdp7@Nkx2-1
5.44e-51FFCP PHASE2:Mm9::chr12:57637595..57637608,-#_fbdcdb337645032d6b1e679f335cd8cdp7@Nkx2-1