Difference between revisions of "UBERON:0004456"
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=entire sense organ system | |name=entire sense organ system | ||
− | |namespace= | + | |namespace=FANTOM |
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= |
Latest revision as of 08:46, 12 September 2014
Name: | entire sense organ system | ||
---|---|---|---|
Namespace: | FANTOM | ||
Definition: | "Sum of all sensory systems in an organism." [] | ||
Xrefs: |
| ||
Synonyms: | "sense organ system" EXACT [FMA:78499] | ||
Comments: | note the distinct between entire sensory system and individual system. this reconciles is_a and part_of distinctions between ssAOs | ||
Subset: | uberon_slim |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0000467(anatomical system) |
---|
Children
disjoint from: | UBERON:0000949 (endocrine system),UBERON:0000990 (reproductive system),UBERON:0001004 (respiratory system),UBERON:0001007 (digestive system),UBERON:0001008 (renal system),UBERON:0001009 (circulatory system),UBERON:0001016 (nervous system),UBERON:0001033 (gustatory system),UBERON:0001434 (skeletal system),UBERON:0002204 (musculoskeletal system),UBERON:0002294 (biliary system),UBERON:0002330 (exocrine system),UBERON:0002390 (hematopoietic system),UBERON:0002405 (immune system),UBERON:0002416 (integumental system),UBERON:0002423 (hepatobiliary system) |
---|---|
part of: | UBERON:0001032 (sensory system) |
Ontology Tree: Loaded from BioPortal
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10030-101E3 (retina, adult, pool1)
- 10054-101G9 (eye, fetal, donor1)
- 10059-101H5 (tongue, fetal, donor1)
- 10203-103F5 (tongue, adult)
- 10268-104D7 (eye - vitreous humor, donor1)
- 10269-104D8
- 10270-104D9
- 10271-104E1
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10275-104E5
... further results Mouse (Mus musculus)
- 10030-101E3 (retina, adult, pool1)
- 10054-101G9 (eye, fetal, donor1)
- 10059-101H5 (tongue, fetal, donor1)
- 10203-103F5 (tongue, adult)
- 10268-104D7 (eye - vitreous humor, donor1)
- 10269-104D8
- 10270-104D9
- 10271-104E1
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10275-104E5
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004456 (entire sense organ system), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
4.42e-69 | FFCP PHASE1:Hg19::chr2:45169233..45169244,+#_f77e93c1f737eb679db1865f1093e5a4 | p10@SIX3 |
4.42e-69 | FFCP PHASE2:Hg19::chr2:45169233..45169244,+#_f77e93c1f737eb679db1865f1093e5a4 | p10@SIX3 |
5.33e-65 | FFCP PHASE1:Mm9::chr17:31818263..31818276,+#_4a6d79270fb9721e0d9020fec2f2648a | p@chr17:31818263..31818276, + |
5.33e-65 | FFCP PHASE1:Mm9::chr3:129525389..129525400,-#_4a6d79270fb9721e0d9020fec2f2648a | p@chr3:129525389..129525400, - |
5.33e-65 | FFCP PHASE2:Mm9::chr11:3622192..3622225,-#_4a6d79270fb9721e0d9020fec2f2648a | p3@Osbp2 |
5.33e-65 | FFCP PHASE1:Mm9::chr4:133799669..133799683,+#_4a6d79270fb9721e0d9020fec2f2648a | p1@E130218I03Rik |
5.33e-65 | FFCP PHASE1:Mm9::chr10:67364011..67364018,-#_4a6d79270fb9721e0d9020fec2f2648a | p5@Zfp365 |
5.33e-65 | FFCP PHASE2:Mm9::chr14:118451218..118451221,-#_4a6d79270fb9721e0d9020fec2f2648a | p4@Dct |
5.33e-65 | FFCP PHASE1:Mm9::chr11:3622192..3622225,-#_4a6d79270fb9721e0d9020fec2f2648a | p3@Osbp2 |
5.33e-65 | FFCP PHASE1:Mm9::chr14:118451218..118451221,-#_4a6d79270fb9721e0d9020fec2f2648a | p4@Dct |
5.33e-65 | FFCP PHASE2:Mm9::chr4:133799669..133799683,+#_4a6d79270fb9721e0d9020fec2f2648a | p1@E130218I03Rik |
5.33e-65 | FFCP PHASE2:Mm9::chr17:31817987..31818013,+#_4a6d79270fb9721e0d9020fec2f2648a | p@chr17:31817987..31818013, + |
5.33e-65 | FFCP PHASE2:Mm9::chr9:89697580..89697585,-#_4a6d79270fb9721e0d9020fec2f2648a | p1@Mir184 |
5.33e-65 | FFCP PHASE2:Mm9::chr10:127668442..127668453,+#_4a6d79270fb9721e0d9020fec2f2648a | p@chr10:127668442..127668453, + |
5.33e-65 | FFCP PHASE1:Mm9::chr17:31818106..31818119,+#_4a6d79270fb9721e0d9020fec2f2648a | p@chr17:31818106..31818119, + |
5.33e-65 | FFCP PHASE2:Mm9::chr11:77532283..77532316,-#_4a6d79270fb9721e0d9020fec2f2648a | p@chr11:77532283..77532316, - |
5.33e-65 | FFCP PHASE2:Mm9::chr16:21743134..21743139,-#_4a6d79270fb9721e0d9020fec2f2648a | p@chr16:21743134..21743139, - |
5.33e-65 | FFCP PHASE1:Mm9::chr11:77532391..77532408,-#_4a6d79270fb9721e0d9020fec2f2648a | p@chr11:77532391..77532408, - |
5.33e-65 | FFCP PHASE2:Mm9::chr11:77532391..77532408,-#_4a6d79270fb9721e0d9020fec2f2648a | p@chr11:77532391..77532408, - |
5.33e-65 | FFCP PHASE2:Mm9::chr11:3622163..3622187,-#_4a6d79270fb9721e0d9020fec2f2648a | p8@Osbp2 |
5.33e-65 | FFCP PHASE2:Mm9::chr17:31818106..31818119,+#_4a6d79270fb9721e0d9020fec2f2648a | p@chr17:31818106..31818119, + |
5.33e-65 | FFCP PHASE1:Mm9::chr17:31815126..31815139,-#_4a6d79270fb9721e0d9020fec2f2648a | p@chr17:31815126..31815139, - |
5.33e-65 | FFCP PHASE1:Mm9::chr10:127668442..127668453,+#_4a6d79270fb9721e0d9020fec2f2648a | p@chr10:127668442..127668453, + |
5.33e-65 | FFCP PHASE2:Mm9::chr2:90827760..90827769,+#_4a6d79270fb9721e0d9020fec2f2648a | p6@Celf1 |
5.33e-65 | FFCP PHASE1:Mm9::chr2:90827760..90827769,+#_4a6d79270fb9721e0d9020fec2f2648a | p6@Celf1 |
5.33e-65 | FFCP PHASE2:Mm9::chr17:31818263..31818276,+#_4a6d79270fb9721e0d9020fec2f2648a | p@chr17:31818263..31818276, + |
5.33e-65 | FFCP PHASE2:Mm9::chr3:129525389..129525400,-#_4a6d79270fb9721e0d9020fec2f2648a | p@chr3:129525389..129525400, - |
5.33e-65 | FFCP PHASE1:Mm9::chr9:89697580..89697585,-#_4a6d79270fb9721e0d9020fec2f2648a | p1@Mir184 |
5.33e-65 | FFCP PHASE1:Mm9::chr11:5876195..5876219,-#_4a6d79270fb9721e0d9020fec2f2648a | p@chr11:5876195..5876219, - |
5.33e-65 | FFCP PHASE2:Mm9::chr11:5876195..5876219,-#_4a6d79270fb9721e0d9020fec2f2648a | p@chr11:5876195..5876219, - |
5.33e-65 | FFCP PHASE1:Mm9::chr11:77532283..77532316,-#_4a6d79270fb9721e0d9020fec2f2648a | p@chr11:77532283..77532316, - |
5.33e-65 | FFCP PHASE1:Mm9::chr16:21743134..21743139,-#_4a6d79270fb9721e0d9020fec2f2648a | -, p@chr16:21743134..21743139 |
5.33e-65 | FFCP PHASE2:Mm9::chr10:67364011..67364018,-#_4a6d79270fb9721e0d9020fec2f2648a | p5@Zfp365 |
5.33e-65 | FFCP PHASE1:Mm9::chr17:31817987..31818013,+#_4a6d79270fb9721e0d9020fec2f2648a | p@chr17:31817987..31818013, + |
5.33e-65 | FFCP PHASE2:Mm9::chr17:31815126..31815139,-#_4a6d79270fb9721e0d9020fec2f2648a | p@chr17:31815126..31815139, - |
5.33e-65 | FFCP PHASE1:Mm9::chr11:3622163..3622187,-#_4a6d79270fb9721e0d9020fec2f2648a | p8@Osbp2 |
7.33e-60 | FFCP PHASE2:Hg19::chr2:45168617..45168631,-#_32a08a8404e204953dd1ed1c5f27a2b5 | p1@ENST00000456467 |
7.33e-60 | FFCP PHASE1:Hg19::chr2:45168617..45168631,-#_32a08a8404e204953dd1ed1c5f27a2b5 | p1@ENST00000456467 |
9.27e-59 | FFCP PHASE1:Mm9::chr10:127668637..127668650,+#_9942c7437846dc686331e6c5b58accce | p3@LOC100504989, p3@Timeless |
9.27e-59 | FFCP PHASE2:Mm9::chr7:64675015..64675028,+#_9942c7437846dc686331e6c5b58accce | p@chr7:64675015..64675028, + |
9.27e-59 | FFCP PHASE2:Mm9::chr10:127668637..127668650,+#_9942c7437846dc686331e6c5b58accce | p3@LOC100504989, p3@Timeless |
9.27e-59 | FFCP PHASE1:Mm9::chr7:64675015..64675028,+#_9942c7437846dc686331e6c5b58accce | p@chr7:64675015..64675028, + |
1.08e-58 | FFCP PHASE2:Mm9::chr2:105509100..105509107,+#_646bafa908446940807850b4ccfd64ca | p6@Pax6 |
1.08e-58 | FFCP PHASE1:Mm9::chr6:97891135..97891147,+#_646bafa908446940807850b4ccfd64ca | p@chr6:97891135..97891147, + |
1.08e-58 | FFCP PHASE1:Mm9::chr2:105509100..105509107,+#_646bafa908446940807850b4ccfd64ca | p6@Pax6 |
1.08e-58 | FFCP PHASE2:Mm9::chr6:97891135..97891147,+#_646bafa908446940807850b4ccfd64ca | p@chr6:97891135..97891147, + |
1.26e-58 | FFCP PHASE2:Mm9::chr14:49498256..49498278,+#_80a2f04281148a8d9fa2701e3ecade4a | p1@4933429O19Rik |
1.26e-58 | FFCP PHASE1:Mm9::chr14:49498256..49498278,+#_80a2f04281148a8d9fa2701e3ecade4a | p1@4933429O19Rik |
3.92e-58 | FFCP PHASE1:Hg19::chr1:26498321..26498327,-#_964299f0cf31996cf5595cd9ed70161d | p1@ENST00000448923 |
3.92e-58 | FFCP PHASE2:Hg19::chr1:26498321..26498327,-#_964299f0cf31996cf5595cd9ed70161d | p1@ENST00000448923 |
5.97e-58 | FFCP PHASE2:Hg19::chr2:45169172..45169177,+#_b68705cf2faee7ea9bfb455e213656de | p11@SIX3 |
5.97e-58 | FFCP PHASE1:Hg19::chr2:45169172..45169177,+#_b68705cf2faee7ea9bfb455e213656de | p11@SIX3 |
7.26e-58 | FFCP PHASE1:Mm9::chr8:77582172..77582183,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr8:77582172..77582183, + |
7.26e-58 | FFCP PHASE2:Mm9::chr5:112698505..112698537,-#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr5:112698505..112698537, - |
7.26e-58 | FFCP PHASE2:Mm9::chr10:127668686..127668697,+#_bc63476fbd632aeca89d45f5cf3890c8 | p4@LOC100504989, p4@Timeless |
7.26e-58 | FFCP PHASE2:Mm9::chr6:115162924..115162933,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr6:115162924..115162933, + |
7.26e-58 | FFCP PHASE2:Mm9::chr17:31816514..31816526,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr17:31816514..31816526, + |
7.26e-58 | FFCP PHASE2:Mm9::chr5:112696408..112696421,-#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr5:112696408..112696421, - |
7.26e-58 | FFCP PHASE1:Mm9::chr4:19208009..19208054,+#_bc63476fbd632aeca89d45f5cf3890c8 | p1@Cngb3 |
7.26e-58 | FFCP PHASE2:Mm9::chr2:93906955..93906973,-#_bc63476fbd632aeca89d45f5cf3890c8 | p2@Hsd17b12 |
7.26e-58 | FFCP PHASE2:Mm9::chr5:113506190..113506202,-#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr5:113506190..113506202, - |
7.26e-58 | FFCP PHASE2:Mm9::chr9:107964319..107964338,-#_bc63476fbd632aeca89d45f5cf3890c8 | p11@Rnf123 |
7.26e-58 | FFCP PHASE2:Mm9::chr7:28282354..28282365,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr7:28282354..28282365, + |
7.26e-58 | FFCP PHASE2:Mm9::chr5:112675556..112675574,-#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr5:112675556..112675574, - |
7.26e-58 | FFCP PHASE2:Mm9::chr4:19208009..19208054,+#_bc63476fbd632aeca89d45f5cf3890c8 | p1@Cngb3 |
7.26e-58 | FFCP PHASE1:Mm9::chr5:112690636..112690656,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr5:112690636..112690656, + |
7.26e-58 | FFCP PHASE2:Mm9::chr16:56204438..56204451,+#_bc63476fbd632aeca89d45f5cf3890c8 | p1@Impg2 |
7.26e-58 | FFCP PHASE2:Mm9::chr5:112690744..112690755,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr5:112690744..112690755, + |
7.26e-58 | FFCP PHASE1:Mm9::chr5:112681470..112681483,-#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr5:112681470..112681483, - |
7.26e-58 | FFCP PHASE1:Mm9::chr5:112698505..112698537,-#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr5:112698505..112698537, - |
7.26e-58 | FFCP PHASE1:Mm9::chr16:56204438..56204451,+#_bc63476fbd632aeca89d45f5cf3890c8 | p1@Impg2 |
7.26e-58 | FFCP PHASE2:Mm9::chr3:129525405..129525428,-#_bc63476fbd632aeca89d45f5cf3890c8 | p1@Rrh |
7.26e-58 | FFCP PHASE1:Mm9::chr1:65147201..65147212,-#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr1:65147201..65147212, - |
7.26e-58 | FFCP PHASE1:Mm9::chr9:107964319..107964338,-#_bc63476fbd632aeca89d45f5cf3890c8 | p11@Rnf123 |
7.26e-58 | FFCP PHASE1:Mm9::chr1:38092602..38092616,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr1:38092602..38092616, + |
7.26e-58 | FFCP PHASE2:Mm9::chr11:77532270..77532280,-#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr11:77532270..77532280, - |
7.26e-58 | FFCP PHASE2:Mm9::chr17:31817947..31817965,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr17:31817947..31817965, + |
7.26e-58 | FFCP PHASE2:Mm9::chr1:65147201..65147212,-#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr1:65147201..65147212, - |
7.26e-58 | FFCP PHASE1:Mm9::chr5:112690744..112690755,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr5:112690744..112690755, + |
7.26e-58 | FFCP PHASE2:Mm9::chr6:3944001..3944016,+#_bc63476fbd632aeca89d45f5cf3890c8 | p1@Gngt1 |
7.26e-58 | FFCP PHASE2:Mm9::chr5:113506006..113506025,-#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr5:113506006..113506025, - |
7.26e-58 | FFCP PHASE1:Mm9::chr8:77582194..77582219,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr8:77582194..77582219, + |
7.26e-58 | FFCP PHASE2:Mm9::chr10:127668799..127668810,+#_bc63476fbd632aeca89d45f5cf3890c8 | p5@LOC100504989, p5@Timeless |
7.26e-58 | FFCP PHASE1:Mm9::chr15:36655026..36655032,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr15:36655026..36655032, + |
7.26e-58 | FFCP PHASE1:Mm9::chr3:129525405..129525428,-#_bc63476fbd632aeca89d45f5cf3890c8 | p1@Rrh |
7.26e-58 | FFCP PHASE2:Mm9::chr1:152166537..152166579,+#_bc63476fbd632aeca89d45f5cf3890c8 | p1@Pdc |
7.26e-58 | FFCP PHASE1:Mm9::chr17:31816514..31816526,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr17:31816514..31816526, + |
7.26e-58 | FFCP PHASE1:Mm9::chr2:93906955..93906973,-#_bc63476fbd632aeca89d45f5cf3890c8 | p2@Hsd17b12 |
7.26e-58 | FFCP PHASE2:Mm9::chr8:77582194..77582219,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr8:77582194..77582219, + |
7.26e-58 | FFCP PHASE1:Mm9::chr6:85969237..85969247,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr6:85969237..85969247, + |
7.26e-58 | FFCP PHASE1:Mm9::chr1:38092538..38092550,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr1:38092538..38092550, + |
7.26e-58 | FFCP PHASE1:Mm9::chr10:127668686..127668697,+#_bc63476fbd632aeca89d45f5cf3890c8 | p4@LOC100504989, p4@Timeless |
7.26e-58 | FFCP PHASE2:Mm9::chr17:31816584..31816600,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr17:31816584..31816600, + |
7.26e-58 | FFCP PHASE2:Mm9::chr17:31818629..31818644,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr17:31818629..31818644, + |
7.26e-58 | FFCP PHASE1:Mm9::chr17:31818629..31818644,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr17:31818629..31818644, + |
7.26e-58 | FFCP PHASE1:Mm9::chr5:113506006..113506025,-#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr5:113506006..113506025, - |
7.26e-58 | FFCP PHASE2:Mm9::chr15:36655026..36655032,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr15:36655026..36655032, + |
7.26e-58 | FFCP PHASE1:Mm9::chr6:115162924..115162933,+#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr6:115162924..115162933, + |
7.26e-58 | FFCP PHASE1:Mm9::chr1:65147224..65147236,-#_bc63476fbd632aeca89d45f5cf3890c8 | p@chr1:65147224..65147236, - |
7.26e-58 | FFCP PHASE2:Mm9::chr1:65149656..65149674,-#_bc63476fbd632aeca89d45f5cf3890c8 | p2@Cryga |