Personal tools

Difference between revisions of "UBERON:0004456"

From FANTOM5_SSTAR

Jump to: navigation, search
 
Line 13: Line 13:
 
|located_in=
 
|located_in=
 
|name=entire sense organ system
 
|name=entire sense organ system
−
|namespace=
+
|namespace=FANTOM
 
|obo_creation_date=
 
|obo_creation_date=
 
|part_of=
 
|part_of=

Latest revision as of 08:46, 12 September 2014

Name:entire sense organ system
Namespace:FANTOM
Definition:"Sum of all sensory systems in an organism." []
Xrefs:
links:
FMA:78499
Synonyms: "sense organ system" EXACT [FMA:78499]
Comments:note the distinct between entire sensory system and individual system. this reconciles is_a and part_of distinctions between ssAOs
Subset: uberon_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data

Parents

is_a:UBERON:0000467(anatomical system)



Children

disjoint from:UBERON:0000949 (endocrine system),UBERON:0000990 (reproductive system),UBERON:0001004 (respiratory system),UBERON:0001007 (digestive system),UBERON:0001008 (renal system),UBERON:0001009 (circulatory system),UBERON:0001016 (nervous system),UBERON:0001033 (gustatory system),UBERON:0001434 (skeletal system),UBERON:0002204 (musculoskeletal system),UBERON:0002294 (biliary system),UBERON:0002330 (exocrine system),UBERON:0002390 (hematopoietic system),UBERON:0002405 (immune system),UBERON:0002416 (integumental system),UBERON:0002423 (hepatobiliary system)
part of:UBERON:0001032 (sensory system)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004456 (entire sense organ system), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
4.42e-69FFCP PHASE1:Hg19::chr2:45169233..45169244,+#_f77e93c1f737eb679db1865f1093e5a4p10@SIX3
4.42e-69FFCP PHASE2:Hg19::chr2:45169233..45169244,+#_f77e93c1f737eb679db1865f1093e5a4p10@SIX3
5.33e-65FFCP PHASE1:Mm9::chr17:31818263..31818276,+#_4a6d79270fb9721e0d9020fec2f2648ap@chr17:31818263..31818276, +
5.33e-65FFCP PHASE1:Mm9::chr3:129525389..129525400,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr3:129525389..129525400, -
5.33e-65FFCP PHASE2:Mm9::chr11:3622192..3622225,-#_4a6d79270fb9721e0d9020fec2f2648ap3@Osbp2
5.33e-65FFCP PHASE1:Mm9::chr4:133799669..133799683,+#_4a6d79270fb9721e0d9020fec2f2648ap1@E130218I03Rik
5.33e-65FFCP PHASE1:Mm9::chr10:67364011..67364018,-#_4a6d79270fb9721e0d9020fec2f2648ap5@Zfp365
5.33e-65FFCP PHASE2:Mm9::chr14:118451218..118451221,-#_4a6d79270fb9721e0d9020fec2f2648ap4@Dct
5.33e-65FFCP PHASE1:Mm9::chr11:3622192..3622225,-#_4a6d79270fb9721e0d9020fec2f2648ap3@Osbp2
5.33e-65FFCP PHASE1:Mm9::chr14:118451218..118451221,-#_4a6d79270fb9721e0d9020fec2f2648ap4@Dct
5.33e-65FFCP PHASE2:Mm9::chr4:133799669..133799683,+#_4a6d79270fb9721e0d9020fec2f2648ap1@E130218I03Rik
5.33e-65FFCP PHASE2:Mm9::chr17:31817987..31818013,+#_4a6d79270fb9721e0d9020fec2f2648ap@chr17:31817987..31818013, +
5.33e-65FFCP PHASE2:Mm9::chr9:89697580..89697585,-#_4a6d79270fb9721e0d9020fec2f2648ap1@Mir184
5.33e-65FFCP PHASE2:Mm9::chr10:127668442..127668453,+#_4a6d79270fb9721e0d9020fec2f2648ap@chr10:127668442..127668453, +
5.33e-65FFCP PHASE1:Mm9::chr17:31818106..31818119,+#_4a6d79270fb9721e0d9020fec2f2648ap@chr17:31818106..31818119, +
5.33e-65FFCP PHASE2:Mm9::chr11:77532283..77532316,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr11:77532283..77532316, -
5.33e-65FFCP PHASE2:Mm9::chr16:21743134..21743139,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr16:21743134..21743139, -
5.33e-65FFCP PHASE1:Mm9::chr11:77532391..77532408,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr11:77532391..77532408, -
5.33e-65FFCP PHASE2:Mm9::chr11:77532391..77532408,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr11:77532391..77532408, -
5.33e-65FFCP PHASE2:Mm9::chr11:3622163..3622187,-#_4a6d79270fb9721e0d9020fec2f2648ap8@Osbp2
5.33e-65FFCP PHASE2:Mm9::chr17:31818106..31818119,+#_4a6d79270fb9721e0d9020fec2f2648ap@chr17:31818106..31818119, +
5.33e-65FFCP PHASE1:Mm9::chr17:31815126..31815139,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr17:31815126..31815139, -
5.33e-65FFCP PHASE1:Mm9::chr10:127668442..127668453,+#_4a6d79270fb9721e0d9020fec2f2648ap@chr10:127668442..127668453, +
5.33e-65FFCP PHASE2:Mm9::chr2:90827760..90827769,+#_4a6d79270fb9721e0d9020fec2f2648ap6@Celf1
5.33e-65FFCP PHASE1:Mm9::chr2:90827760..90827769,+#_4a6d79270fb9721e0d9020fec2f2648ap6@Celf1
5.33e-65FFCP PHASE2:Mm9::chr17:31818263..31818276,+#_4a6d79270fb9721e0d9020fec2f2648ap@chr17:31818263..31818276, +
5.33e-65FFCP PHASE2:Mm9::chr3:129525389..129525400,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr3:129525389..129525400, -
5.33e-65FFCP PHASE1:Mm9::chr9:89697580..89697585,-#_4a6d79270fb9721e0d9020fec2f2648ap1@Mir184
5.33e-65FFCP PHASE1:Mm9::chr11:5876195..5876219,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr11:5876195..5876219, -
5.33e-65FFCP PHASE2:Mm9::chr11:5876195..5876219,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr11:5876195..5876219, -
5.33e-65FFCP PHASE1:Mm9::chr11:77532283..77532316,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr11:77532283..77532316, -
5.33e-65FFCP PHASE1:Mm9::chr16:21743134..21743139,-#_4a6d79270fb9721e0d9020fec2f2648a-, p@chr16:21743134..21743139
5.33e-65FFCP PHASE2:Mm9::chr10:67364011..67364018,-#_4a6d79270fb9721e0d9020fec2f2648ap5@Zfp365
5.33e-65FFCP PHASE1:Mm9::chr17:31817987..31818013,+#_4a6d79270fb9721e0d9020fec2f2648ap@chr17:31817987..31818013, +
5.33e-65FFCP PHASE2:Mm9::chr17:31815126..31815139,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr17:31815126..31815139, -
5.33e-65FFCP PHASE1:Mm9::chr11:3622163..3622187,-#_4a6d79270fb9721e0d9020fec2f2648ap8@Osbp2
7.33e-60FFCP PHASE2:Hg19::chr2:45168617..45168631,-#_32a08a8404e204953dd1ed1c5f27a2b5p1@ENST00000456467
7.33e-60FFCP PHASE1:Hg19::chr2:45168617..45168631,-#_32a08a8404e204953dd1ed1c5f27a2b5p1@ENST00000456467
9.27e-59FFCP PHASE1:Mm9::chr10:127668637..127668650,+#_9942c7437846dc686331e6c5b58acccep3@LOC100504989, p3@Timeless
9.27e-59FFCP PHASE2:Mm9::chr7:64675015..64675028,+#_9942c7437846dc686331e6c5b58acccep@chr7:64675015..64675028, +
9.27e-59FFCP PHASE2:Mm9::chr10:127668637..127668650,+#_9942c7437846dc686331e6c5b58acccep3@LOC100504989, p3@Timeless
9.27e-59FFCP PHASE1:Mm9::chr7:64675015..64675028,+#_9942c7437846dc686331e6c5b58acccep@chr7:64675015..64675028, +
1.08e-58FFCP PHASE2:Mm9::chr2:105509100..105509107,+#_646bafa908446940807850b4ccfd64cap6@Pax6
1.08e-58FFCP PHASE1:Mm9::chr6:97891135..97891147,+#_646bafa908446940807850b4ccfd64cap@chr6:97891135..97891147, +
1.08e-58FFCP PHASE1:Mm9::chr2:105509100..105509107,+#_646bafa908446940807850b4ccfd64cap6@Pax6
1.08e-58FFCP PHASE2:Mm9::chr6:97891135..97891147,+#_646bafa908446940807850b4ccfd64cap@chr6:97891135..97891147, +
1.26e-58FFCP PHASE2:Mm9::chr14:49498256..49498278,+#_80a2f04281148a8d9fa2701e3ecade4ap1@4933429O19Rik
1.26e-58FFCP PHASE1:Mm9::chr14:49498256..49498278,+#_80a2f04281148a8d9fa2701e3ecade4ap1@4933429O19Rik
3.92e-58FFCP PHASE1:Hg19::chr1:26498321..26498327,-#_964299f0cf31996cf5595cd9ed70161dp1@ENST00000448923
3.92e-58FFCP PHASE2:Hg19::chr1:26498321..26498327,-#_964299f0cf31996cf5595cd9ed70161dp1@ENST00000448923
5.97e-58FFCP PHASE2:Hg19::chr2:45169172..45169177,+#_b68705cf2faee7ea9bfb455e213656dep11@SIX3
5.97e-58FFCP PHASE1:Hg19::chr2:45169172..45169177,+#_b68705cf2faee7ea9bfb455e213656dep11@SIX3
7.26e-58FFCP PHASE1:Mm9::chr8:77582172..77582183,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr8:77582172..77582183, +
7.26e-58FFCP PHASE2:Mm9::chr5:112698505..112698537,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:112698505..112698537, -
7.26e-58FFCP PHASE2:Mm9::chr10:127668686..127668697,+#_bc63476fbd632aeca89d45f5cf3890c8p4@LOC100504989, p4@Timeless
7.26e-58FFCP PHASE2:Mm9::chr6:115162924..115162933,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr6:115162924..115162933, +
7.26e-58FFCP PHASE2:Mm9::chr17:31816514..31816526,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr17:31816514..31816526, +
7.26e-58FFCP PHASE2:Mm9::chr5:112696408..112696421,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:112696408..112696421, -
7.26e-58FFCP PHASE1:Mm9::chr4:19208009..19208054,+#_bc63476fbd632aeca89d45f5cf3890c8p1@Cngb3
7.26e-58FFCP PHASE2:Mm9::chr2:93906955..93906973,-#_bc63476fbd632aeca89d45f5cf3890c8p2@Hsd17b12
7.26e-58FFCP PHASE2:Mm9::chr5:113506190..113506202,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:113506190..113506202, -
7.26e-58FFCP PHASE2:Mm9::chr9:107964319..107964338,-#_bc63476fbd632aeca89d45f5cf3890c8p11@Rnf123
7.26e-58FFCP PHASE2:Mm9::chr7:28282354..28282365,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr7:28282354..28282365, +
7.26e-58FFCP PHASE2:Mm9::chr5:112675556..112675574,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:112675556..112675574, -
7.26e-58FFCP PHASE2:Mm9::chr4:19208009..19208054,+#_bc63476fbd632aeca89d45f5cf3890c8p1@Cngb3
7.26e-58FFCP PHASE1:Mm9::chr5:112690636..112690656,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:112690636..112690656, +
7.26e-58FFCP PHASE2:Mm9::chr16:56204438..56204451,+#_bc63476fbd632aeca89d45f5cf3890c8p1@Impg2
7.26e-58FFCP PHASE2:Mm9::chr5:112690744..112690755,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:112690744..112690755, +
7.26e-58FFCP PHASE1:Mm9::chr5:112681470..112681483,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:112681470..112681483, -
7.26e-58FFCP PHASE1:Mm9::chr5:112698505..112698537,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:112698505..112698537, -
7.26e-58FFCP PHASE1:Mm9::chr16:56204438..56204451,+#_bc63476fbd632aeca89d45f5cf3890c8p1@Impg2
7.26e-58FFCP PHASE2:Mm9::chr3:129525405..129525428,-#_bc63476fbd632aeca89d45f5cf3890c8p1@Rrh
7.26e-58FFCP PHASE1:Mm9::chr1:65147201..65147212,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr1:65147201..65147212, -
7.26e-58FFCP PHASE1:Mm9::chr9:107964319..107964338,-#_bc63476fbd632aeca89d45f5cf3890c8p11@Rnf123
7.26e-58FFCP PHASE1:Mm9::chr1:38092602..38092616,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr1:38092602..38092616, +
7.26e-58FFCP PHASE2:Mm9::chr11:77532270..77532280,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr11:77532270..77532280, -
7.26e-58FFCP PHASE2:Mm9::chr17:31817947..31817965,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr17:31817947..31817965, +
7.26e-58FFCP PHASE2:Mm9::chr1:65147201..65147212,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr1:65147201..65147212, -
7.26e-58FFCP PHASE1:Mm9::chr5:112690744..112690755,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:112690744..112690755, +
7.26e-58FFCP PHASE2:Mm9::chr6:3944001..3944016,+#_bc63476fbd632aeca89d45f5cf3890c8p1@Gngt1
7.26e-58FFCP PHASE2:Mm9::chr5:113506006..113506025,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:113506006..113506025, -
7.26e-58FFCP PHASE1:Mm9::chr8:77582194..77582219,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr8:77582194..77582219, +
7.26e-58FFCP PHASE2:Mm9::chr10:127668799..127668810,+#_bc63476fbd632aeca89d45f5cf3890c8p5@LOC100504989, p5@Timeless
7.26e-58FFCP PHASE1:Mm9::chr15:36655026..36655032,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr15:36655026..36655032, +
7.26e-58FFCP PHASE1:Mm9::chr3:129525405..129525428,-#_bc63476fbd632aeca89d45f5cf3890c8p1@Rrh
7.26e-58FFCP PHASE2:Mm9::chr1:152166537..152166579,+#_bc63476fbd632aeca89d45f5cf3890c8p1@Pdc
7.26e-58FFCP PHASE1:Mm9::chr17:31816514..31816526,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr17:31816514..31816526, +
7.26e-58FFCP PHASE1:Mm9::chr2:93906955..93906973,-#_bc63476fbd632aeca89d45f5cf3890c8p2@Hsd17b12
7.26e-58FFCP PHASE2:Mm9::chr8:77582194..77582219,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr8:77582194..77582219, +
7.26e-58FFCP PHASE1:Mm9::chr6:85969237..85969247,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr6:85969237..85969247, +
7.26e-58FFCP PHASE1:Mm9::chr1:38092538..38092550,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr1:38092538..38092550, +
7.26e-58FFCP PHASE1:Mm9::chr10:127668686..127668697,+#_bc63476fbd632aeca89d45f5cf3890c8p4@LOC100504989, p4@Timeless
7.26e-58FFCP PHASE2:Mm9::chr17:31816584..31816600,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr17:31816584..31816600, +
7.26e-58FFCP PHASE2:Mm9::chr17:31818629..31818644,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr17:31818629..31818644, +
7.26e-58FFCP PHASE1:Mm9::chr17:31818629..31818644,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr17:31818629..31818644, +
7.26e-58FFCP PHASE1:Mm9::chr5:113506006..113506025,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:113506006..113506025, -
7.26e-58FFCP PHASE2:Mm9::chr15:36655026..36655032,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr15:36655026..36655032, +
7.26e-58FFCP PHASE1:Mm9::chr6:115162924..115162933,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr6:115162924..115162933, +
7.26e-58FFCP PHASE1:Mm9::chr1:65147224..65147236,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr1:65147224..65147236, -
7.26e-58FFCP PHASE2:Mm9::chr1:65149656..65149674,-#_bc63476fbd632aeca89d45f5cf3890c8p2@Cryga

Retrieved from "http://f5-webapp2.gsc.riken.jp/5/sstar/index.php?title=UBERON:0004456&oldid=3277659"