FFCP PHASE1:Hg19::chr2:96991246..96991249,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:96991246..96991249,- | |||
|description=CAGE_peak_at_chr2:96991246..96991249,- | |description=CAGE_peak_at_chr2:96991246..96991249,- | ||
|id=chr2:96991246..96991249,- | |id=chr2:96991246..96991249,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;2.25e-13;5!CL:0000307;8.85e-11;3!CL:0000946;1.90e-08;1!CL:0000817;1.90e-08;1!CL:0000786;1.90e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,9.10e-11,3;CL:0000069,9.10e-11,3;CL:0000307,9.10e-11,3;CL:0000377,9.10e-11,3;CL:0000817,1.11e-10,3;CL:0000946,9.46e-09,1;CL:0000786,9.46e-09,1;CL:0000980,9.46e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000377;8.85e-11;3 | |||
|ontology_enrichment_disease=DOID:3095!4.90e-10!22;DOID:2994!4.90e-10!22;DOID:171!4.08e-08!10;DOID:0060058!3.03e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;1.42e-11;10!DOID:169;3.11e-11;6!DOID:3095;3.90e-11;22!DOID:2994;3.90e-11;22!DOID:2355;1.90e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.16e-11,10;DOID:169,3.92e-11,6;DOID:3095,5.55e-11,22;DOID:2994,5.55e-11,22;DOID:2355,8.78e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.25e-13;5!UBERON:0002410;2.25e-13;5!UBERON:0000010;1.19e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.98e-13,5;UBERON:0002410,2.98e-13,5;UBERON:0000010,1.39e-07,8 | |||
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| ||
|short_description=p@chr2:96991246..96991249,- | |short_description=p@chr2:96991246..96991249,- | ||
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Latest revision as of 13:19, 29 July 2015
Short description: | p@chr2:96991246..96991249, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:96991246..96991249, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 9.10e-11 | 3 |
branched duct epithelial cell | 9.10e-11 | 3 |
tracheal epithelial cell | 9.10e-11 | 3 |
tracheoblast | 9.10e-11 | 3 |
precursor B cell | 1.11e-10 | 3 |
antibody secreting cell | 9.46e-09 | 1 |
plasma cell | 9.46e-09 | 1 |
plasmablast | 9.46e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.98e-13 | 5 |
autonomic nervous system | 2.98e-13 | 5 |
peripheral nervous system | 1.39e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.16e-11 | 10 |
neuroendocrine tumor | 3.92e-11 | 6 |
germ cell and embryonal cancer | 5.55e-11 | 22 |
germ cell cancer | 5.55e-11 | 22 |
anemia | 8.78e-09 | 1 |