FFCP PHASE1:Hg19::chr1:163045575..163045587,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:163045575..163045587,+
|short_description=p5@RGS4
|description=CAGE_peak_5_at_RGS4_5end
|association_with_transcript=-478bp_to_AL137433_5end
|EntrezGene=5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5999 | |EntrezGene=5999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10000 | |HGNC=10000 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-478bp_to_AL137433_5end | |||
|cluster_id=chr1:163045575..163045587,+ | |||
|description=CAGE_peak_5_at_RGS4_5end | |||
|id=chr1:163045575..163045587,+ | |||
|ontology_enrichment_celltype=CL:0002494!3.63e-11!16;CL:0000359!4.27e-09!32;CL:0000192!4.00e-08!42;CL:0000514!4.00e-08!42;CL:0000680!4.90e-08!57;CL:0000056!4.90e-08!57;CL:0000355!4.90e-08!57;CL:0002594!1.84e-07!4;CL:0002548!2.18e-07!6;CL:0000055!2.29e-07!180;CL:0000569!2.50e-07!4;CL:0000011!2.50e-07!4;CL:0000187!7.51e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002557;1.30e-09;1!CL:0002601;1.30e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002601,1.15e-09,1;CL:0002557,2.08e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.89e-12!14;DOID:0060084!6.73e-07!3;DOID:127!6.73e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.96e-15;14!DOID:0060084;1.71e-12;3!DOID:127;1.71e-12;3!DOID:120;9.29e-11;27!DOID:193;5.53e-10;29!DOID:0060072;1.36e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.94e-15,14;DOID:0060084,1.62e-12,3;DOID:127,1.62e-12,3;DOID:120,8.37e-11,27;DOID:193,5.03e-10,29;DOID:0060072,1.31e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0004535!2.96e-13!110;UBERON:0004872!1.05e-12!84;UBERON:0001009!1.28e-12!113;UBERON:0002049!1.19e-11!79;UBERON:0007798!1.19e-11!79;UBERON:0001637!1.21e-10!42;UBERON:0003509!1.21e-10!42;UBERON:0004572!1.21e-10!42;UBERON:0001981!1.37e-09!60;UBERON:0007500!1.37e-09!60;UBERON:0004537!1.37e-09!60;UBERON:0006965!1.37e-09!60;UBERON:0000948!1.54e-09!24;UBERON:0005498!1.54e-09!24;UBERON:0004140!1.54e-09!24;UBERON:0009881!1.54e-09!24;UBERON:0004141!1.54e-09!24;UBERON:0003084!1.54e-09!24;UBERON:0007005!1.54e-09!24;UBERON:0004139!1.54e-09!24;UBERON:0004291!1.54e-09!24;UBERON:0001950!5.22e-09!20;UBERON:0000025!5.46e-09!194;UBERON:0000055!1.85e-08!69;UBERON:0007100!4.04e-08!27;UBERON:0002619!5.56e-08!22;UBERON:0000477!8.52e-08!286;UBERON:0001869!1.27e-07!32;UBERON:0001310!1.84e-07!4;UBERON:0000200!2.24e-07!6;UBERON:0003914!2.89e-07!118;UBERON:0000119!3.56e-07!312;UBERON:0001134!3.63e-07!61;UBERON:0002036!3.63e-07!61;UBERON:0003082!3.63e-07!61;UBERON:0001893!5.48e-07!34;UBERON:0000483!6.32e-07!309;UBERON:0002385!8.90e-07!63;UBERON:0001015!8.90e-07!63;UBERON:0000383!8.90e-07!63;UBERON:0000956!9.52e-07!25;UBERON:0000203!9.52e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0003134;9.05e-11;33!UBERON:0000474;9.31e-09;37!UBERON:0000995;3.81e-08;17!UBERON:0002118;1.01e-07;5!UBERON:0003975;1.06e-07;18!UBERON:0003100;4.45e-07;41!UBERON:0003133;6.43e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003134,2.16e-10,37;UBERON:0000474,2.16e-10,37;UBERON:0003100,2.66e-09,41;UBERON:0003133,7.86e-08,48;UBERON:0002118,1.19e-07,5 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,1.34465029290355,1.20538905604795,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825354125820202,0,0.516833518338658,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,2.02608818663328,0.132409180813219,0,0,1.68203280042692,1.06748995729705,0.49333509683432,0,0.134710672069688,0.163461903113459,0,1.72852777344,0,0,0,0,0.117434498643765,0,0,0.408308342509787,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,1.13432183160021,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4400297149257,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,1.74306691720059,1.69954085009497,0,0,0,0.479249710983165,0,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0.271265023699736,0.415941723061614,0,0,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12597744800525,0,0.154209693802656,0.710246901252508,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0.404364963146632,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0.551365343546124,0,0.876901770507525,0,0,0.202910376962704,1.8589409885985,0.281695602532241,0,0,0.35667105148125,1.41904425628239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0.485560759068186,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0.542999601753713,2.5926644736038,2.28611152076586,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.49118192058834,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947015026375446,1.0062716070103,0,0.228840068396924,1.20984739010591,0.15543720058278,0.443565449968902,0.318593534327405,0,0.310525913752519,1.65882483136342,1.86089200190596,0,0.601030435988874,3.42724690951916,3.25496586563729,0.545545977607678,0.322231671127465,0,1.19428766609585,0,0,0.673498977531838,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.578742114812744,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.128458450192919,0,0,0.82046545696302,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.135075169236789,0.781078098613847,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.526182188502793,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,1.34465029290355,1.20538905604795,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825354125820202,0,0.516833518338658,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,2.02608818663328,0.132409180813219,0,0,1.68203280042692,1.06748995729705,0.49333509683432,0,0.134710672069688,0.163461903113459,0,1.72852777344,0,0,0,0,0.117434498643765,0,0,0.408308342509787,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,1.13432183160021,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4400297149257,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,1.74306691720059,1.69954085009497,0,0,0,0.479249710983165,0,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0.271265023699736,0.415941723061614,0,0,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12597744800525,0,0.154209693802656,0.710246901252508,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0.404364963146632,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0.551365343546124,0,0.876901770507525,0,0,0.202910376962704,1.8589409885985,0.281695602532241,0,0,0.35667105148125,1.41904425628239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0.485560759068186,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0.542999601753713,2.5926644736038,2.28611152076586,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.49118192058834,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947015026375446,1.0062716070103,0,0.228840068396924,1.20984739010591,0.15543720058278,0.443565449968902,0.318593534327405,0,0.310525913752519,1.65882483136342,1.86089200190596,0,0.601030435988874,3.42724690951916,3.25496586563729,0.545545977607678,0.322231671127465,0,1.19428766609585,0,0,0.673498977531838,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.578742114812744,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.128458450192919,0,0,0.82046545696302,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.135075169236789,0.781078098613847,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.526182188502793,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@RGS4 | |||
}} | }} |
Latest revision as of 07:59, 18 September 2015
Short description: | p5@RGS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RGS4_5end |
Coexpression cluster: | NA |
Association with transcript: | -478bp_to_AL137433_5end |
EntrezGene: | RGS4 |
HGNC: | 10000 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine smooth muscle cell | 1.15e-09 | 1 |
fibroblast of pulmonary artery | 2.08e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ | 2.16e-10 | 37 |
female reproductive system | 2.16e-10 | 37 |
female organism | 2.66e-09 | 41 |
reproductive organ | 7.86e-08 | 48 |
right ovary | 1.19e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.94e-15 | 14 |
cell type benign neoplasm | 1.62e-12 | 3 |
leiomyoma | 1.62e-12 | 3 |
female reproductive organ cancer | 8.37e-11 | 27 |
reproductive organ cancer | 5.03e-10 | 29 |
benign neoplasm | 1.31e-09 | 4 |