FFCP PHASE1:Hg19::chr2:173792893..173792910,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0005020!4.37e-15!6;CL:0002138!4.37e-15!6;CL:0005022!4.37e-15!6;CL:0000746!2.95e-08!3;CL:0000513!2.95e-08!3;CL:0002139!3.00e-08!24;CL:0002618!1.90e-07!3 | |ontology_enrichment_celltype=CL:0005020!4.37e-15!6;CL:0002138!4.37e-15!6;CL:0005022!4.37e-15!6;CL:0000746!2.95e-08!3;CL:0000513!2.95e-08!3;CL:0002139!3.00e-08!24;CL:0002618!1.90e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000746;1.48e-18;3!CL:0000737;3.60e-14;4!CL:0002494;4.54e-08;16 | |ontology_enrichment_celltype_v019=CL:0000746;1.48e-18;3!CL:0000737;3.60e-14;4!CL:0002494;4.54e-08;16 | ||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.36e-18,3;CL:0000513,1.36e-18,3;CL:0000737,3.37e-14,4;CL:0002494,4.48e-08,16 | |||
|ontology_enrichment_development_v019=CL:0000513;1.48e-18;3 | |ontology_enrichment_development_v019=CL:0000513;1.48e-18;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.99e-21!115;UBERON:0004111!3.52e-12!241;UBERON:0002465!2.53e-11!10;UBERON:0001473!4.30e-11!8;UBERON:0004536!4.30e-11!8;UBERON:0006558!4.30e-11!8;UBERON:0000477!1.03e-10!286;UBERON:0000025!1.81e-07!194 | |ontology_enrichment_uberon=UBERON:0007023!1.99e-21!115;UBERON:0004111!3.52e-12!241;UBERON:0002465!2.53e-11!10;UBERON:0001473!4.30e-11!8;UBERON:0004536!4.30e-11!8;UBERON:0006558!4.30e-11!8;UBERON:0000477!1.03e-10!286;UBERON:0000025!1.81e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.60e-28;2!UBERON:0002757;3.60e-28;2!UBERON:0010134;3.60e-28;2!UBERON:0005408;3.60e-28;2!UBERON:0001899;3.60e-28;2!UBERON:0003296;1.32e-14;4!UBERON:0010133;1.32e-14;4!UBERON:0002784;1.32e-14;4!UBERON:0000996;2.11e-14;1!UBERON:0001894;9.70e-09;7!UBERON:0000473;1.21e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0001905;3.60e-28;2!UBERON:0002757;3.60e-28;2!UBERON:0010134;3.60e-28;2!UBERON:0005408;3.60e-28;2!UBERON:0001899;3.60e-28;2!UBERON:0003296;1.32e-14;4!UBERON:0010133;1.32e-14;4!UBERON:0002784;1.32e-14;4!UBERON:0000996;2.11e-14;1!UBERON:0001894;9.70e-09;7!UBERON:0000473;1.21e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.60e-28,2;UBERON:0002757,3.60e-28,2;UBERON:0010134,3.60e-28,2;UBERON:0005408,3.60e-28,2;UBERON:0001899,3.60e-28,2;UBERON:0003296,1.32e-14,4;UBERON:0010133,1.32e-14,4;UBERON:0002784,1.32e-14,4;UBERON:0000996,2.11e-14,1;UBERON:0001894,9.70e-09,7;UBERON:0006222,9.70e-09,7;UBERON:0000473,1.23e-07,8 | |||
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| ||
|short_description=p12@RAPGEF4 | |short_description=p12@RAPGEF4 | ||
}} | }} |
Revision as of 01:53, 21 November 2012
Short description: | p12@RAPGEF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_RAPGEF4_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 13bp_to_ENST00000466030_5end |
EntrezGene: | RAPGEF4 |
HGNC: | 16626 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.36e-18 | 3 |
cardiac muscle myoblast | 1.36e-18 | 3 |
striated muscle cell | 3.37e-14 | 4 |
cardiocyte | 4.48e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.60e-28 | 2 |
regional part of epithalamus | 3.60e-28 | 2 |
secretory circumventricular organ | 3.60e-28 | 2 |
circumventricular organ | 3.60e-28 | 2 |
epithalamus | 3.60e-28 | 2 |
gland of diencephalon | 1.32e-14 | 4 |
neuroendocrine gland | 1.32e-14 | 4 |
regional part of diencephalon | 1.32e-14 | 4 |
vagina | 2.11e-14 | 1 |
diencephalon | 9.70e-09 | 7 |
future diencephalon | 9.70e-09 | 7 |
testis | 1.23e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.