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UBERON:0004637

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Name:otic capsule
Definition:"The cartilage capsule surrounding the inner ear mechanism; in elasmobranchs, it remains cartilaginous in the adult; in the embryos of higher vertebrates, it is cartilaginous at first but later becomes bony (at approximately 23 weeks in humans)[Biology-Online]. Bilaterally paired cartilage encasing the semicircular canals of the inner ear[ZFA]." http://www.biology-online.org/dictionary/Otic_capsule, ZFA:0001500
Xrefs:
links:

AAO:0010143
EHDAA:4704
EHDAA2:0001333
EMAPA:17596
SCTID:361515007

VHOG:0000854
Synonyms: "otic capsule" EXACT [ZFA:0001500]
"otic capsule cartilage condensation" EXACT [EHDAA2:0001333]
"periotic capsule" RELATED [MA:0000252]
Comments:otic capsule goes to CS20 in EHDAA2, and until adult in ZFA

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000032(),UBERON:0004121(ectoderm-derived structure),UBERON:0004765(skeletal element)
part_of:UBERON:0001694(petrous part of temporal bone),UBERON:0001703(neurocranium),UBERON:0001846(internal ear)



Children

part of:UBERON:0010113 (future membranous labyrinth)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004637 (otic capsule), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_ef0848008da7a18a37873e78b0320066p@chr18:42158627..42158630, -
1.87e-86FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_ef0848008da7a18a37873e78b0320066p@chr11:75421384..75421397, +
1.87e-86FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_ef0848008da7a18a37873e78b0320066p@chr9:66860888..66860899, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_ef0848008da7a18a37873e78b0320066p@chr13:78257491..78257498, +
1.87e-86FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_ef0848008da7a18a37873e78b0320066p@chr3:31585340..31585360, +
1.87e-86FFCP PHASE1:Mm9::chr7:109052297..109052300,-#_ef0848008da7a18a37873e78b0320066p2@Tomt
1.87e-86FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_ef0848008da7a18a37873e78b0320066p@chr2:128881546..128881553, -
1.87e-86FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_ef0848008da7a18a37873e78b0320066p@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_ef0848008da7a18a37873e78b0320066p10@Otof
1.87e-86FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_ef0848008da7a18a37873e78b0320066p21@Espn
1.87e-86FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_ef0848008da7a18a37873e78b0320066p4@BC030867
1.87e-86FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_ef0848008da7a18a37873e78b0320066p1@Kncn
1.87e-86FFCP PHASE1:Mm9::chr9:42206745..42206774,-#_ef0848008da7a18a37873e78b0320066p@chr9:42206745..42206774, -
1.87e-86FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_ef0848008da7a18a37873e78b0320066p7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_ef0848008da7a18a37873e78b0320066p1@Espnl
1.87e-86FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_ef0848008da7a18a37873e78b0320066p@chr15:65641779..65641790, +
1.87e-86FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_ef0848008da7a18a37873e78b0320066p@chr2:73232344..73232356, -
1.87e-86FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_ef0848008da7a18a37873e78b0320066p2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_ef0848008da7a18a37873e78b0320066p@chr3:154693281..154693317, -
1.87e-86FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_ef0848008da7a18a37873e78b0320066p10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_ef0848008da7a18a37873e78b0320066p41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_ef0848008da7a18a37873e78b0320066p@chrX:154140800..154140810, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_ef0848008da7a18a37873e78b0320066p@chr17:13983198..13983203, +
1.87e-86FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_ef0848008da7a18a37873e78b0320066p@chr2:152453066..152453075, -
1.87e-86FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_ef0848008da7a18a37873e78b0320066p@chr15:12848147..12848162, +
1.87e-86FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_ef0848008da7a18a37873e78b0320066p@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_ef0848008da7a18a37873e78b0320066p@chr5:150945209..150945220, +
1.87e-86FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_ef0848008da7a18a37873e78b0320066p@chr13:48087761..48087775, -
1.87e-86FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_ef0848008da7a18a37873e78b0320066p@chr11:4689776..4689785, -
1.87e-86FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_ef0848008da7a18a37873e78b0320066p5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_ef0848008da7a18a37873e78b0320066p7@Tecta
1.87e-86FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_ef0848008da7a18a37873e78b0320066p@chr10:108316802..108316807, -
1.87e-86FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_ef0848008da7a18a37873e78b0320066p12@B3galt5
1.87e-86FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_ef0848008da7a18a37873e78b0320066p@chr7:133957514..133957529, +
1.87e-86FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_ef0848008da7a18a37873e78b0320066p@chr4:63079735..63079745, -
1.87e-86FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_ef0848008da7a18a37873e78b0320066p@chr5:147854240..147854249, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_ef0848008da7a18a37873e78b0320066p3@Otogl
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_ef0848008da7a18a37873e78b0320066p2@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_ef0848008da7a18a37873e78b0320066p@chr14:47293496..47293510, -
1.87e-86FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_ef0848008da7a18a37873e78b0320066p10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_ef0848008da7a18a37873e78b0320066p1@Tmc1
1.87e-86FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_ef0848008da7a18a37873e78b0320066p@chr6:86746562..86746579, -
1.87e-86FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_ef0848008da7a18a37873e78b0320066p@chr11:89702580..89702593, -
1.87e-86FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_ef0848008da7a18a37873e78b0320066p2@Strc
1.87e-86FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_ef0848008da7a18a37873e78b0320066p@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_ef0848008da7a18a37873e78b0320066p@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_ef0848008da7a18a37873e78b0320066p7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_ef0848008da7a18a37873e78b0320066p@chr1:172843813..172843834, -
1.87e-86FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_ef0848008da7a18a37873e78b0320066p@chr5:3909310..3909321, +
1.87e-86FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_ef0848008da7a18a37873e78b0320066p@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_ef0848008da7a18a37873e78b0320066p@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_ef0848008da7a18a37873e78b0320066p@chr5:72652660..72652667, +
1.87e-86FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_ef0848008da7a18a37873e78b0320066p@chr11:89702580..89702593, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207777..42207789,-#_ef0848008da7a18a37873e78b0320066p7@Tecta
1.87e-86FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_ef0848008da7a18a37873e78b0320066p6@Jag1
1.87e-86FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_ef0848008da7a18a37873e78b0320066p@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_ef0848008da7a18a37873e78b0320066p1@Otog
1.87e-86FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_ef0848008da7a18a37873e78b0320066p@chr5:3909310..3909321, +
1.87e-86FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_ef0848008da7a18a37873e78b0320066p@chr14:31283072..31283081, -
1.87e-86FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_ef0848008da7a18a37873e78b0320066p@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_ef0848008da7a18a37873e78b0320066p@chr11:75421384..75421397, +
1.87e-86FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_ef0848008da7a18a37873e78b0320066p7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_ef0848008da7a18a37873e78b0320066p3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_ef0848008da7a18a37873e78b0320066p6@Fam70b
1.87e-86FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_ef0848008da7a18a37873e78b0320066p@chr15:58022966..58022995, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_ef0848008da7a18a37873e78b0320066p1@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_ef0848008da7a18a37873e78b0320066p2@Strc
1.87e-86FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_ef0848008da7a18a37873e78b0320066p9@Ankrd24
1.87e-86FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_ef0848008da7a18a37873e78b0320066p2@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_ef0848008da7a18a37873e78b0320066p5@Tecta
1.87e-86FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_ef0848008da7a18a37873e78b0320066p@chr15:97806034..97806061, +
1.87e-86FFCP PHASE1:Mm9::chr8:13435173..13435186,+#_ef0848008da7a18a37873e78b0320066p6@Fam70b
1.87e-86FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_ef0848008da7a18a37873e78b0320066p@chr14:31283072..31283081, -
1.87e-86FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_ef0848008da7a18a37873e78b0320066p6@Jag1
1.87e-86FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_ef0848008da7a18a37873e78b0320066p@chr1:172843847..172843880, -
1.87e-86FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_ef0848008da7a18a37873e78b0320066p@chr17:13983095..13983100, +
1.87e-86FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_ef0848008da7a18a37873e78b0320066p@chr18:38104702..38104718, -
1.87e-86FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_ef0848008da7a18a37873e78b0320066p2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr13:43699228..43699239,+#_ef0848008da7a18a37873e78b0320066p@chr13:43699228..43699239, +
1.87e-86FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_ef0848008da7a18a37873e78b0320066p@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_ef0848008da7a18a37873e78b0320066p13@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_ef0848008da7a18a37873e78b0320066p@chr13:78257518..78257522, +
1.87e-86FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_ef0848008da7a18a37873e78b0320066p18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_ef0848008da7a18a37873e78b0320066p2@Fscn2
1.87e-86FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_ef0848008da7a18a37873e78b0320066p@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_ef0848008da7a18a37873e78b0320066p1@Tectb
1.87e-86FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_ef0848008da7a18a37873e78b0320066p4@BC030867
1.87e-86FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_ef0848008da7a18a37873e78b0320066p4@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_ef0848008da7a18a37873e78b0320066p@chr5:28035962..28035983, +
1.87e-86FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_ef0848008da7a18a37873e78b0320066p@chr3:81012915..81012923, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_ef0848008da7a18a37873e78b0320066p4@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_ef0848008da7a18a37873e78b0320066p1@Grxcr1
1.87e-86FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_ef0848008da7a18a37873e78b0320066p@chr17:13983179..13983190, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_ef0848008da7a18a37873e78b0320066p5@Tecta
1.87e-86FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_ef0848008da7a18a37873e78b0320066p@chr9:42206784..42206793, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_ef0848008da7a18a37873e78b0320066p2@Tectb
1.87e-86FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_ef0848008da7a18a37873e78b0320066p@chr15:85334335..85334353, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_ef0848008da7a18a37873e78b0320066p5@Otogl
1.87e-86FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_ef0848008da7a18a37873e78b0320066p2@Slc26a5
1.87e-86FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_ef0848008da7a18a37873e78b0320066p2@9230102O04Rik

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