FFCP PHASE1:Hg19::chr1:75601981..75601989,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:75601981..75601989,+ | |||
|coexpression_cluster_id=C53 | |coexpression_cluster_id=C53 | ||
|description=CAGE_peak_at_chr1:75601981..75601989,+ | |description=CAGE_peak_at_chr1:75601981..75601989,+ | ||
|id=chr1:75601981..75601989,+ | |id=chr1:75601981..75601989,+ | ||
|ontology_enrichment_celltype=CL:0002556!2.52e-63!6;CL:0002552!2.53e-28!5;CL:0000057!1.82e-12!75;CL:0000055!1.80e-07!180 | |ontology_enrichment_celltype=CL:0002556!2.52e-63!6;CL:0002552!2.53e-28!5;CL:0000057!1.82e-12!75;CL:0000055!1.80e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002552;1.71e-14;5!CL:0002556;2.59e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,1.83e-14,5;CL:0002556,2.45e-12,6 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.32e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;7.48e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,7.48e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0001758!2.52e-63!6;UBERON:0003672!2.52e-63!6;UBERON:0003129!1.12e-34!11;UBERON:0000165!2.57e-34!28;UBERON:0000930!2.57e-34!28;UBERON:0000075!2.25e-29!13;UBERON:0005944!2.25e-29!13;UBERON:0004288!2.25e-29!13;UBERON:0003089!2.25e-29!13;UBERON:0000078!2.91e-21!18;UBERON:0001444!8.20e-20!48;UBERON:0001828!5.58e-18!8;UBERON:0001282!1.41e-16!1;UBERON:0009842!1.41e-16!1;UBERON:0003704!1.41e-16!1;UBERON:0001171!1.41e-16!1;UBERON:0001172!1.41e-16!1;UBERON:0000033!2.41e-11!123;UBERON:0000153!8.85e-11!129;UBERON:0007811!8.85e-11!129;UBERON:0003102!1.06e-09!95;UBERON:0004121!5.75e-08!169;UBERON:0000924!9.23e-08!173;UBERON:0006601!9.23e-08!173;UBERON:0000166!3.28e-07!21;UBERON:0001007!3.88e-07!155;UBERON:0001555!3.88e-07!155;UBERON:0007026!3.88e-07!155 | |ontology_enrichment_uberon=UBERON:0001758!2.52e-63!6;UBERON:0003672!2.52e-63!6;UBERON:0003129!1.12e-34!11;UBERON:0000165!2.57e-34!28;UBERON:0000930!2.57e-34!28;UBERON:0000075!2.25e-29!13;UBERON:0005944!2.25e-29!13;UBERON:0004288!2.25e-29!13;UBERON:0003089!2.25e-29!13;UBERON:0000078!2.91e-21!18;UBERON:0001444!8.20e-20!48;UBERON:0001828!5.58e-18!8;UBERON:0001282!1.41e-16!1;UBERON:0009842!1.41e-16!1;UBERON:0003704!1.41e-16!1;UBERON:0001171!1.41e-16!1;UBERON:0001172!1.41e-16!1;UBERON:0000033!2.41e-11!123;UBERON:0000153!8.85e-11!129;UBERON:0007811!8.85e-11!129;UBERON:0003102!1.06e-09!95;UBERON:0004121!5.75e-08!169;UBERON:0000924!9.23e-08!173;UBERON:0006601!9.23e-08!173;UBERON:0000166!3.28e-07!21;UBERON:0001007!3.88e-07!155;UBERON:0001555!3.88e-07!155;UBERON:0007026!3.88e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0001758;2.59e-12;6!UBERON:0003672;2.59e-12;6!UBERON:0003129;9.43e-11;7!UBERON:0000165;1.54e-10;28!UBERON:0001828;1.41e-09;8!UBERON:0001555;5.80e-08;54!UBERON:0011137;2.55e-07;11!UBERON:0010323;2.55e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,2.45e-12,6;UBERON:0003672,2.45e-12,6;UBERON:0003129,8.99e-11,7;UBERON:0000165,3.24e-10,29;UBERON:0000930,3.24e-10,29;UBERON:0001828,1.47e-09,8;UBERON:0010323,2.47e-07,11 | |||
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|short_description=p@chr1:75601981..75601989,+ | |short_description=p@chr1:75601981..75601989,+ | ||
}} | }} |
Latest revision as of 10:19, 28 July 2015
Short description: | p@chr1:75601981..75601989, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:75601981..75601989, + |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 1.83e-14 | 5 |
fibroblast of periodontium | 2.45e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
periodontium | 2.45e-12 | 6 |
dentition | 2.45e-12 | 6 |
skull | 8.99e-11 | 7 |
mouth | 3.24e-10 | 29 |
stomodeum | 3.24e-10 | 29 |
gingiva | 1.47e-09 | 8 |
cranial skeletal system | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 7.48e-07 | 11 |