FFCP PHASE1:Hg19::chr20:4618187..4618233,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:4618187..4618233,- | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_at_chr20:4618187..4618233,- | |description=CAGE_peak_at_chr20:4618187..4618233,- | ||
|id=chr20:4618187..4618233,- | |id=chr20:4618187..4618233,- | ||
|ontology_enrichment_celltype=CL:0000047;8.10e-26;2 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000047;8.10e-26;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.69e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0003056;8.00e-18;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000966;2.94e-11;5!UBERON:0005388;2.94e-11;5!UBERON:0001802;2.94e-11;5!UBERON:0000970;5.16e-11;20!UBERON:0002104;1.53e-10;21!UBERON:0000020;1.02e-09;23!UBERON:0001032;2.35e-09;24!UBERON:0004456;2.35e-09;24 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002336!3.07e-16!1;UBERON:0001018!3.07e-16!1;UBERON:0002473!3.07e-16!1;UBERON:0005340!3.07e-16!1;UBERON:0002316!3.07e-16!1;UBERON:0003544!3.07e-16!1;UBERON:0001020!3.07e-16!1;UBERON:0005970!3.07e-16!1;UBERON:0002437!3.07e-16!1;UBERON:0000966!2.23e-13!5;UBERON:0005388!2.23e-13!5;UBERON:0001802!2.23e-13!5;UBERON:0001905!5.94e-09!2;UBERON:0002757!5.94e-09!2;UBERON:0010134!5.94e-09!2;UBERON:0002784!5.94e-09!2;UBERON:0005408!5.94e-09!2;UBERON:0001899!5.94e-09!2;UBERON:0005162!8.74e-09!2;UBERON:0000122!8.74e-09!2;UBERON:0005743!4.74e-08!86;UBERON:0000970!1.32e-07!20;UBERON:0002104!2.88e-07!21;UBERON:0000073!2.96e-07!94;UBERON:0001016!2.96e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.94e-11;5!UBERON:0005388;2.94e-11;5!UBERON:0001802;2.94e-11;5!UBERON:0000970;5.16e-11;20!UBERON:0002104;1.53e-10;21!UBERON:0000020;1.02e-09;23!UBERON:0001032;2.35e-09;24!UBERON:0004456;2.35e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.53e-10,21;UBERON:0002104,1.53e-10,21;UBERON:0000966,1.32e-09,6;UBERON:0005388,1.32e-09,6;UBERON:0001802,1.32e-09,6;UBERON:0000020,2.35e-09,24;UBERON:0001032,2.35e-09,24;UBERON:0004456,2.35e-09,24 | |||
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|short_description=p@chr20:4618187..4618233,- | |short_description=p@chr20:4618187..4618233,- | ||
}} | }} |
Latest revision as of 14:48, 28 July 2015
Short description: | p@chr20:4618187..4618233, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:4618187..4618233, - |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
eye | 1.53e-10 | 21 |
visual system | 1.53e-10 | 21 |
retina | 1.32e-09 | 6 |
photoreceptor array | 1.32e-09 | 6 |
posterior segment of eyeball | 1.32e-09 | 6 |
sense organ | 2.35e-09 | 24 |
sensory system | 2.35e-09 | 24 |
entire sense organ system | 2.35e-09 | 24 |