FFCP PHASE1:Hg19::chr2:20796228..20796230,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:20796228..20796230,+ | |||
|coexpression_cluster_id=C839 | |||
|description=CAGE_peak_at_chr2:20796228..20796230,+ | |description=CAGE_peak_at_chr2:20796228..20796230,+ | ||
|id=chr2:20796228..20796230,+ | |id=chr2:20796228..20796230,+ | ||
|ontology_enrichment_celltype=CL:0002586!7.77e-10!3;CL:0002150!1.11e-08!3;CL:0000861!1.11e-08!3;CL:0000066!6.70e-08!254;CL:0000149!1.86e-07!4 | |ontology_enrichment_celltype=CL:0002586!7.77e-10!3;CL:0002150!1.11e-08!3;CL:0000861!1.11e-08!3;CL:0000066!6.70e-08!254;CL:0000149!1.86e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002621;1.42e-18;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.48e-18,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.25e-14;1!UBERON:0007297;7.78e-08;2 | |||
|ontology_enrichment_disease=DOID:305!1.10e-13!106;DOID:0050687!2.35e-08!143 | |ontology_enrichment_disease=DOID:305!1.10e-13!106;DOID:0050687!2.35e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.62e-25!9;UBERON:0000966!2.10e-15!5;UBERON:0005388!2.10e-15!5;UBERON:0001802!2.10e-15!5;UBERON:0001557!4.33e-11!19;UBERON:0008947!5.47e-10!38;UBERON:0003258!5.47e-10!38;UBERON:0001781!7.77e-10!3;UBERON:0001782!7.77e-10!3;UBERON:0005424!7.77e-10!3;UBERON:0001896!2.02e-09!3;UBERON:0005290!2.02e-09!3;UBERON:0010096!2.02e-09!3;UBERON:0000063!7.58e-09!97;UBERON:0001905!2.70e-07!2;UBERON:0002757!2.70e-07!2;UBERON:0010134!2.70e-07!2;UBERON:0002784!2.70e-07!2;UBERON:0005408!2.70e-07!2;UBERON:0001899!2.70e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.57e-27;2!UBERON:0002757;3.57e-27;2!UBERON:0010134;3.57e-27;2!UBERON:0005408;3.57e-27;2!UBERON:0001899;3.57e-27;2!UBERON:0001949;1.42e-18;3!UBERON:0000998;2.25e-14;1!UBERON:0006868;2.25e-14;1!UBERON:0003296;4.12e-14;4!UBERON:0010133;4.12e-14;4!UBERON:0002784;4.12e-14;4!UBERON:0000966;7.47e-12;5!UBERON:0005388;7.47e-12;5!UBERON:0001802;7.47e-12;5!UBERON:0003929;1.68e-08;7!UBERON:0001894;1.85e-08;7!UBERON:0003350;1.52e-07;8!UBERON:0001828;1.52e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.34e-27,2;UBERON:0002757,5.34e-27,2;UBERON:0010134,5.34e-27,2;UBERON:0005408,5.34e-27,2;UBERON:0001899,5.34e-27,2;UBERON:0001949,1.48e-18,3;UBERON:0000998,2.75e-14,1;UBERON:0006868,2.75e-14,1;UBERON:0003296,5.03e-14,4;UBERON:0010133,5.03e-14,4;UBERON:0002784,5.03e-14,4;UBERON:0000966,4.97e-10,6;UBERON:0005388,4.97e-10,6;UBERON:0001802,4.97e-10,6;UBERON:0001894,2.07e-08,7;UBERON:0006222,2.07e-08,7;UBERON:0003350,1.54e-07,8;UBERON:0001828,1.54e-07,8 | |||
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| ||
|short_description=p@chr2:20796228..20796230,+ | |short_description=p@chr2:20796228..20796230,+ | ||
}} | }} |
Latest revision as of 05:26, 29 July 2015
Short description: | p@chr2:20796228..20796230, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:20796228..20796230, + |
Coexpression cluster: | C839_Retinal_Mallassezderived_retina_medulla_mesothelioma_osteosarcoma_Saos2 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.48e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
pineal body | 5.34e-27 | 2 |
regional part of epithalamus | 5.34e-27 | 2 |
secretory circumventricular organ | 5.34e-27 | 2 |
circumventricular organ | 5.34e-27 | 2 |
epithalamus | 5.34e-27 | 2 |
gingival epithelium | 1.48e-18 | 3 |
seminal vesicle | 2.75e-14 | 1 |
seminal fluid secreting gland | 2.75e-14 | 1 |
gland of diencephalon | 5.03e-14 | 4 |
neuroendocrine gland | 5.03e-14 | 4 |
regional part of diencephalon | 5.03e-14 | 4 |
retina | 4.97e-10 | 6 |
photoreceptor array | 4.97e-10 | 6 |
posterior segment of eyeball | 4.97e-10 | 6 |
diencephalon | 2.07e-08 | 7 |
future diencephalon | 2.07e-08 | 7 |
epithelium of mucosa | 1.54e-07 | 8 |
gingiva | 1.54e-07 | 8 |