FFCP PHASE1:Mm9::chr6:54516277..54516290,-
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Short description: | p3@Scrn1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Scrn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 85bp_to_NM_027268, uc009bzw.1_5end |
EntrezGene: | Scrn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@Scrn1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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ectodermal cell | 2.10e-24 | 44 |
neurectodermal cell | 2.10e-24 | 44 |
neural cell | 1.72e-23 | 43 |
neuron | 4.35e-20 | 33 |
neuronal stem cell | 4.35e-20 | 33 |
neuroblast | 4.35e-20 | 33 |
electrically signaling cell | 4.35e-20 | 33 |
CNS neuron (sensu Vertebrata) | 4.41e-18 | 23 |
neuroblast (sensu Vertebrata) | 4.41e-18 | 23 |
electrically responsive cell | 3.45e-16 | 39 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
---|---|---|
nervous system | 6.79e-49 | 75 |
central nervous system | 7.34e-48 | 73 |
ectoderm-derived structure | 3.27e-47 | 95 |
ectoderm | 3.27e-47 | 95 |
presumptive ectoderm | 3.27e-47 | 95 |
neurectoderm | 2.27e-43 | 64 |
neural plate | 2.27e-43 | 64 |
presumptive neural plate | 2.27e-43 | 64 |
ecto-epithelium | 3.26e-38 | 73 |
regional part of nervous system | 4.15e-38 | 54 |
Showing 1 to 10 of 43 entries