FFCP PHASE2:Hg19::chr17:48266579..48266595,-
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Short description: | p54@COL1A1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_54_at_COL1A1_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | -434bp_to_ENST00000511732_5end |
EntrezGene: | COL1A1 |
HGNC: | 2197 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p54@COL1A1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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fibroblast | 3.30e-22 | 76 |
multi fate stem cell | 1.33e-13 | 427 |
somatic stem cell | 5.77e-13 | 433 |
stem cell | 3.79e-12 | 441 |
connective tissue cell | 1.05e-09 | 361 |
mesenchymal cell | 4.72e-09 | 354 |
motile cell | 1.20e-07 | 386 |
skin fibroblast | 3.42e-07 | 23 |
stromal cell | 4.36e-07 | 28 |
mesenchymal stem cell of adipose | 7.27e-07 | 8 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
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connective tissue | 4.47e-10 | 371 |
omentum | 8.76e-09 | 6 |
peritoneum | 8.76e-09 | 6 |
abdominal cavity | 8.76e-09 | 6 |
visceral peritoneum | 8.76e-09 | 6 |
skeletal muscle tissue | 8.54e-07 | 62 |
striated muscle tissue | 8.54e-07 | 62 |
myotome | 8.54e-07 | 62 |
Showing 1 to 8 of 8 entries