FFCP PHASE2:Hg19::chr1:3371261..3371278,+
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Short description: | p4@ARHGEF16 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARHGEF16_5end |
Coexpression cluster: | C3973_bronchogenic_chorionic_hepatoblastoma_small_testicular_rectum_adenocarcinoma |
Association with transcript: | 114bp_to_NM_014448, uc001akg.3_5end |
EntrezGene: | ARHGEF16 |
HGNC: | 15515 |
UniProt: | B3KTS4Q5VV41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@ARHGEF16 |
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0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.00e-22 | 253 |
embryonic stem cell | 1.52e-11 | 5 |
endo-epithelial cell | 5.07e-10 | 42 |
germ line cell | 7.40e-10 | 7 |
germ cell | 7.40e-10 | 7 |
kidney tubule cell | 5.41e-09 | 10 |
nephron tubule epithelial cell | 5.41e-09 | 10 |
endodermal cell | 9.27e-09 | 58 |
epithelial cell of alimentary canal | 7.37e-08 | 20 |
epithelial cell of nephron | 2.42e-07 | 15 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.16e-13 | 25 |
larynx | 1.23e-11 | 9 |
subdivision of digestive tract | 1.83e-11 | 118 |
intestine | 1.69e-10 | 17 |
endoderm-derived structure | 1.13e-09 | 160 |
endoderm | 1.13e-09 | 160 |
presumptive endoderm | 1.13e-09 | 160 |
digestive system | 1.33e-09 | 145 |
digestive tract | 1.33e-09 | 145 |
primitive gut | 1.33e-09 | 145 |
Showing 1 to 10 of 23 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.42e-24 | 106 |
cell type cancer | 2.67e-16 | 143 |
adenocarcinoma | 3.56e-10 | 25 |
cancer | 7.02e-09 | 235 |
disease of cellular proliferation | 1.96e-08 | 239 |
Showing 1 to 5 of 5 entries