FFCP PHASE1:Mm9::chr19:59533206..59533217,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr19:59533206..59533217,+ | |id=chr19:59533206..59533217,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.60e-08,3;CL:0000359,1.60e-08,3;CL:0002539,1.60e-08,3;CL:0000514,1.60e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!4.11e-10!26;UBERON:0000990!4.11e-10!26;UBERON:0002113!4.39e-10!14;UBERON:0003918!4.39e-10!14;UBERON:0005095!4.39e-10!14;UBERON:0007687!4.39e-10!14;UBERON:0003133!5.16e-10!24;UBERON:0001008!6.03e-09!17;UBERON:0006554!3.66e-08!16;UBERON:0000474!1.08e-07!9;UBERON:0002791!1.81e-07!29;UBERON:0003528!1.81e-07!29;UBERON:0001893!1.81e-07!29;UBERON:0003100!8.39e-07!11;UBERON:0003134!8.78e-07!8 | |ontology_enrichment_uberon=UBERON:0005156!4.11e-10!26;UBERON:0000990!4.11e-10!26;UBERON:0002113!4.39e-10!14;UBERON:0003918!4.39e-10!14;UBERON:0005095!4.39e-10!14;UBERON:0007687!4.39e-10!14;UBERON:0003133!5.16e-10!24;UBERON:0001008!6.03e-09!17;UBERON:0006554!3.66e-08!16;UBERON:0000474!1.08e-07!9;UBERON:0002791!1.81e-07!29;UBERON:0003528!1.81e-07!29;UBERON:0001893!1.81e-07!29;UBERON:0003100!8.39e-07!11;UBERON:0003134!8.78e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,8.36e-16,26;UBERON:0000990,8.36e-16,26;UBERON:0000474,1.27e-14,9;UBERON:0003133,1.52e-14,24;UBERON:0003134,4.35e-12,8;UBERON:0003100,8.95e-12,11;UBERON:0002113,5.01e-11,14;UBERON:0003918,5.01e-11,14;UBERON:0011143,5.01e-11,14;UBERON:0005095,5.01e-11,14;UBERON:0007687,5.01e-11,14;UBERON:0001008,6.19e-10,19;UBERON:0000992,2.09e-09,3;UBERON:0000991,6.52e-09,18;UBERON:0005564,6.52e-09,18;UBERON:0001135,1.60e-08,3;UBERON:0004237,1.60e-08,3;UBERON:0004695,1.60e-08,3;UBERON:0002111,1.60e-08,3;UBERON:0004178,1.60e-08,3;UBERON:0006554,2.73e-08,18;UBERON:0004175,1.51e-07,9;UBERON:0004176,2.73e-07,17;UBERON:0009196,2.73e-07,17;UBERON:0009117,2.73e-07,17;UBERON:0000489,6.32e-07,21 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.21652317463417,1.28482726513177,0,0.65407546914134,1.09843091367236,1.36100929351998,0.279972843250725,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,0.518448061542388,0.675029691658453,0.420649922702764,0,0,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0.153606533256243,0.263772575460388,0.914876436024097,0.52091337055676,0,0.56276261003168,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0,0,2.54805239706646,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.898743836428936,0.457500602818626,0.628271760564322,0.521472960576829,1.53429274398198,0.41557608911912,0,1.73126918545538,0.248813941220186,5.05445516867349,0,0.390361328888111,0.229902104433473,0.360124259610698,0.60281927134286,0.136072998302656,0.12811372028485,0,0.258703370739016,0.215567992932842,0.945530400839096,0.703804496655795,0.657587197282725,0.556094498451196,0.696504333044333,0.61734640922383,1.79130840136644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,4.93942139420565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13800740571849,0.685491075658373,2.25415471346161,1.01825663922657,0.969762435838129,1.33258057791605,1.20149420536089,0.885660887877613,1.41298855057237,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0.327869890753351,0.252470927204373,0,0,0,0,0,0,0,0,0,0.642642632843614,1.56134093729095,2.31485284767432,2.60619134965722,2.63952196756057,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0,0.469343416127421,0.21183207086382,0,0.8244312647074,0.645857706783622,0.301564624640779,0.596861720015682,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0,0,0,0,0,0,0,1.94371509857172,1.82004339502807,1.16670713006429,0.387479470433193,0.506868376472335,0.58678619322877,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12609485270709,1.64836461840539,1.71494703263253,0.501572104035363,1.12950368523413,0.460325236507177,0,1.03111909406213,0.685082519770642,0,0,1.35096360967266,0,0.51776031175182,0.31136204275253,0.399024873401031,0.341467211508268,0.972426868273176,0.419226325255965,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.459483751644906,0,0.463537303779422,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0,0.476872379894642,0.290692833264657,0,0.0846146078916765,0.73171189149109,0.526139422875686,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0,0.749431733813838,0.233931608445408,0,0.191288332068843,0.441182838239031,0 | |phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.21652317463417,1.28482726513177,0,0.65407546914134,1.09843091367236,1.36100929351998,0.279972843250725,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,0.518448061542388,0.675029691658453,0.420649922702764,0,0,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0.153606533256243,0.263772575460388,0.914876436024097,0.52091337055676,0,0.56276261003168,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0,0,2.54805239706646,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.898743836428936,0.457500602818626,0.628271760564322,0.521472960576829,1.53429274398198,0.41557608911912,0,1.73126918545538,0.248813941220186,5.05445516867349,0,0.390361328888111,0.229902104433473,0.360124259610698,0.60281927134286,0.136072998302656,0.12811372028485,0,0.258703370739016,0.215567992932842,0.945530400839096,0.703804496655795,0.657587197282725,0.556094498451196,0.696504333044333,0.61734640922383,1.79130840136644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,4.93942139420565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13800740571849,0.685491075658373,2.25415471346161,1.01825663922657,0.969762435838129,1.33258057791605,1.20149420536089,0.885660887877613,1.41298855057237,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0.327869890753351,0.252470927204373,0,0,0,0,0,0,0,0,0,0.642642632843614,1.56134093729095,2.31485284767432,2.60619134965722,2.63952196756057,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0,0.469343416127421,0.21183207086382,0,0.8244312647074,0.645857706783622,0.301564624640779,0.596861720015682,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0,0,0,0,0,0,0,1.94371509857172,1.82004339502807,1.16670713006429,0.387479470433193,0.506868376472335,0.58678619322877,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12609485270709,1.64836461840539,1.71494703263253,0.501572104035363,1.12950368523413,0.460325236507177,0,1.03111909406213,0.685082519770642,0,0,1.35096360967266,0,0.51776031175182,0.31136204275253,0.399024873401031,0.341467211508268,0.972426868273176,0.419226325255965,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.459483751644906,0,0.463537303779422,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0,0.476872379894642,0.290692833264657,0,0.0846146078916765,0.73171189149109,0.526139422875686,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0,0.749431733813838,0.233931608445408,0,0.191288332068843,0.441182838239031,0 | ||
|short_description=p9@Emx2 | |short_description=p9@Emx2 | ||
}} | }} |
Revision as of 02:28, 14 November 2012
Short description: | p9@Emx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Emx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1174 |
Association with transcript: | 26bp_to_ENSMUST00000062216, NM_010132, uc008ibl.1_5end |
EntrezGene: | Emx2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.60e-08 | 3 |
vascular associated smooth muscle cell | 1.60e-08 | 3 |
aortic smooth muscle cell | 1.60e-08 | 3 |
smooth muscle myoblast | 1.60e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
reproductive structure | 8.36e-16 | 26 |
reproductive system | 8.36e-16 | 26 |
female reproductive system | 1.27e-14 | 9 |
reproductive organ | 1.52e-14 | 24 |
female reproductive organ | 4.35e-12 | 8 |
female organism | 8.95e-12 | 11 |
kidney | 5.01e-11 | 14 |
kidney mesenchyme | 5.01e-11 | 14 |
upper urinary tract | 5.01e-11 | 14 |
kidney rudiment | 5.01e-11 | 14 |
kidney field | 5.01e-11 | 14 |
renal system | 6.19e-10 | 19 |
female gonad | 2.09e-09 | 3 |
gonad | 6.52e-09 | 18 |
gonad primordium | 6.52e-09 | 18 |
smooth muscle tissue | 1.60e-08 | 3 |
blood vessel smooth muscle | 1.60e-08 | 3 |
arterial system smooth muscle | 1.60e-08 | 3 |
artery smooth muscle tissue | 1.60e-08 | 3 |
aorta smooth muscle tissue | 1.60e-08 | 3 |
urinary system structure | 2.73e-08 | 18 |
internal genitalia | 1.51e-07 | 9 |
external genitalia | 2.73e-07 | 17 |
indifferent external genitalia | 2.73e-07 | 17 |
indifferent gonad | 2.73e-07 | 17 |
cavitated compound organ | 6.32e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.