FFCP PHASE1:Mm9::chr11:57997420..57997433,+: Difference between revisions
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|id=chr11:57997420..57997433,+ | |id=chr11:57997420..57997433,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,8.14e-08,11;CL:0000827,8.14e-08,11;CL:0000791,1.13e-07,9;CL:0000789,1.13e-07,9;CL:0002420,1.13e-07,9;CL:0002419,1.13e-07,9;CL:0000790,1.13e-07,9;CL:0000738,2.91e-07,17;CL:0002087,2.91e-07,17;CL:0002031,4.52e-07,25;CL:0000838,5.02e-07,12 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!5.11e-12!128;UBERON:0001555!5.11e-12!128;UBERON:0007026!5.11e-12!128;UBERON:0004119!2.05e-11!130;UBERON:0000925!2.05e-11!130;UBERON:0006595!2.05e-11!130;UBERON:0004921!4.65e-11!126;UBERON:0004185!4.65e-11!126;UBERON:0002405!1.44e-08!70;UBERON:0003929!4.42e-08!55;UBERON:0000490!5.49e-08!66;UBERON:0000344!1.37e-07!15;UBERON:0004923!1.49e-07!24;UBERON:0005057!4.20e-07!51;UBERON:0005409!5.76e-07!59;UBERON:0005911!7.32e-07!69 | |ontology_enrichment_uberon=UBERON:0001007!5.11e-12!128;UBERON:0001555!5.11e-12!128;UBERON:0007026!5.11e-12!128;UBERON:0004119!2.05e-11!130;UBERON:0000925!2.05e-11!130;UBERON:0006595!2.05e-11!130;UBERON:0004921!4.65e-11!126;UBERON:0004185!4.65e-11!126;UBERON:0002405!1.44e-08!70;UBERON:0003929!4.42e-08!55;UBERON:0000490!5.49e-08!66;UBERON:0000344!1.37e-07!15;UBERON:0004923!1.49e-07!24;UBERON:0005057!4.20e-07!51;UBERON:0005409!5.76e-07!59;UBERON:0005911!7.32e-07!69 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.23e-13,31;UBERON:0000344,8.49e-13,15;UBERON:0004923,9.71e-11,24;UBERON:0001242,1.63e-10,13;UBERON:0001262,1.63e-10,13;UBERON:0004786,1.63e-10,13;UBERON:0005409,1.05e-09,47;UBERON:0001007,5.40e-08,116;UBERON:0001555,5.40e-08,116;UBERON:0007026,5.40e-08,116;UBERON:0004119,1.06e-07,118;UBERON:0000925,1.06e-07,118;UBERON:0006595,1.06e-07,118;UBERON:0002108,3.72e-07,4;UBERON:0004921,6.61e-07,114 | |||
|phase1_expression=0,1.39590163055744,0.454999239389536,7.86406949397758,9.5170188689806,0,1.16806320297763,33.1846941244851,1.54867594366833,2.10658073689794,0,0.478632953972018,4.28001824828014,9.26656265641372,0.333109761815663,1.01237633694913,0,0.946386496074713,1.91960207048034,1.27316895539409,4.33720779770456,0.992909512008853,2.08959831311148,1.91990907352088,3.21172993494038,0.57423196411502,6.8921919385452,1.939241094173,6.65081968097309,20.1624103807945,4.6563407237614,0,0,0,0,2.1610503896604,2.6542016314108,0,0,0,0,0.683045484958446,0,0.251793635951155,0.912392380975631,0.183546752161682,0,0,0.219686182734472,0,0.419959264876088,0,0.167782606057736,1.45072428402269,3.6970317905671,2.05807548828758,0.85960031981627,2.06268836910977,0,0,0,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0.0755715601067855,8.98579914975201,1.72084775396277,0,0,0.649776417447669,0.448026887097336,3.37066608316204,0,0,0,0,0,0,0,0,0,0,7.19358442230078,4.66088190564909,2.22663208597237,0,0,0,0.150722640552623,0,0.125666591329675,0.494389935468748,9.83275627055399,0,0,0,0,0,0,0,8.17462576667492,0.11981512450592,0,0.254140454146129,0,1.83000241127451,0,0,0,0.20778804455956,0,0,1.11966273549084,1.0108910337347,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.486412857275134,0.146199987425332,1.75640092232841,0.939444931322602,0.420579897128254,0,12.2254949704005,12.164726066523,0,0,0.128867461322093,0,0,0.570676878337677,1.42358718463353,0.658795818896044,0.502670417600539,1.1937388322469,1.36474860983384,4.49409704327111,1.51296634912286,2.38969527905241,0,0,0,0,0,0,0,0.590440591918409,0.31399745568275,0.123397163921801,1.77871576252289,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0.823684239564244,1.43768206527355,2.97712758134803,0.312037673114561,2.27320990152401,0.896987067609561,0.482443521363367,9.79191907883005,0,0,0,0,0,0,0,0,0.8858587585951,0,1.3109065177259,0.690739927463582,1.3018415272336,3.01582567878545,6.52686820582452,1.47529281905711,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0,1.15479086080775,0,0,0,0,0,0.922305443831782,1.55056975900933,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.238744688006273,0,2.62332752966866,0,1.87957968877638,0,0.555583582109135,0.565105371014073,1.23024804948923,1.60144721244566,1.01987057996313,0.419854356970974,0.138199973804424,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0,0.247960367176008,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0.576060012515731,0.316011120628178,0.810900861160657,0.513554785824136,0.77952493786677,0.358053391334963,0.39736270956253,0.120195449519969,0,0.605798699688886,0.304827226619999,0.201652370273681,0.584747284438515,0.481059208201647,0.584384510907845,0,0,0,0,0.965947970160952,0,0.915758121336325,0.428736758158132,1.50471631210609,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.50695859978048,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0.220591419119515,0 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|phase1_expression=0,1.39590163055744,0.454999239389536,7.86406949397758,9.5170188689806,0,1.16806320297763,33.1846941244851,1.54867594366833,2.10658073689794,0,0.478632953972018,4.28001824828014,9.26656265641372,0.333109761815663,1.01237633694913,0,0.946386496074713,1.91960207048034,1.27316895539409,4.33720779770456,0.992909512008853,2.08959831311148,1.91990907352088,3.21172993494038,0.57423196411502,6.8921919385452,1.939241094173,6.65081968097309,20.1624103807945,4.6563407237614,0,0,0,0,2.1610503896604,2.6542016314108,0,0,0,0,0.683045484958446,0,0.251793635951155,0.912392380975631,0.183546752161682,0,0,0.219686182734472,0,0.419959264876088,0,0.167782606057736,1.45072428402269,3.6970317905671,2.05807548828758,0.85960031981627,2.06268836910977,0,0,0,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0.0755715601067855,8.98579914975201,1.72084775396277,0,0,0.649776417447669,0.448026887097336,3.37066608316204,0,0,0,0,0,0,0,0,0,0,7.19358442230078,4.66088190564909,2.22663208597237,0,0,0,0.150722640552623,0,0.125666591329675,0.494389935468748,9.83275627055399,0,0,0,0,0,0,0,8.17462576667492,0.11981512450592,0,0.254140454146129,0,1.83000241127451,0,0,0,0.20778804455956,0,0,1.11966273549084,1.0108910337347,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.486412857275134,0.146199987425332,1.75640092232841,0.939444931322602,0.420579897128254,0,12.2254949704005,12.164726066523,0,0,0.128867461322093,0,0,0.570676878337677,1.42358718463353,0.658795818896044,0.502670417600539,1.1937388322469,1.36474860983384,4.49409704327111,1.51296634912286,2.38969527905241,0,0,0,0,0,0,0,0.590440591918409,0.31399745568275,0.123397163921801,1.77871576252289,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0.823684239564244,1.43768206527355,2.97712758134803,0.312037673114561,2.27320990152401,0.896987067609561,0.482443521363367,9.79191907883005,0,0,0,0,0,0,0,0,0.8858587585951,0,1.3109065177259,0.690739927463582,1.3018415272336,3.01582567878545,6.52686820582452,1.47529281905711,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0,1.15479086080775,0,0,0,0,0,0.922305443831782,1.55056975900933,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.238744688006273,0,2.62332752966866,0,1.87957968877638,0,0.555583582109135,0.565105371014073,1.23024804948923,1.60144721244566,1.01987057996313,0.419854356970974,0.138199973804424,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0,0.247960367176008,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0.576060012515731,0.316011120628178,0.810900861160657,0.513554785824136,0.77952493786677,0.358053391334963,0.39736270956253,0.120195449519969,0,0.605798699688886,0.304827226619999,0.201652370273681,0.584747284438515,0.481059208201647,0.584384510907845,0,0,0,0,0.965947970160952,0,0.915758121336325,0.428736758158132,1.50471631210609,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.50695859978048,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0.220591419119515,0 | ||
|short_description=p3@Gm12250 | |short_description=p3@Gm12250 | ||
}} | }} |
Revision as of 02:49, 14 November 2012
Short description: | p3@Gm12250 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gm12250_5end |
Coexpression cluster: | MCL_coexpression_mm9:2687 |
Association with transcript: | 75bp_to_ENSMUST00000164282, NM_001135115, uc011xvf.1_5end |
EntrezGene: | Gm12250 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 8.14e-08 | 11 |
pro-T cell | 8.14e-08 | 11 |
mature alpha-beta T cell | 1.13e-07 | 9 |
alpha-beta T cell | 1.13e-07 | 9 |
immature T cell | 1.13e-07 | 9 |
mature T cell | 1.13e-07 | 9 |
immature alpha-beta T cell | 1.13e-07 | 9 |
leukocyte | 2.91e-07 | 17 |
nongranular leukocyte | 2.91e-07 | 17 |
hematopoietic lineage restricted progenitor cell | 4.52e-07 | 25 |
lymphoid lineage restricted progenitor cell | 5.02e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.23e-13 | 31 |
mucosa | 8.49e-13 | 15 |
organ component layer | 9.71e-11 | 24 |
intestinal mucosa | 1.63e-10 | 13 |
wall of intestine | 1.63e-10 | 13 |
gastrointestinal system mucosa | 1.63e-10 | 13 |
gastrointestinal system | 1.05e-09 | 47 |
digestive system | 5.40e-08 | 116 |
digestive tract | 5.40e-08 | 116 |
primitive gut | 5.40e-08 | 116 |
endoderm-derived structure | 1.06e-07 | 118 |
endoderm | 1.06e-07 | 118 |
presumptive endoderm | 1.06e-07 | 118 |
small intestine | 3.72e-07 | 4 |
subdivision of digestive tract | 6.61e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.